Fe-heme conformations in ferric myoglobin

Biophysical Journal

Volumn 75, Issue 6, 1998, Pages 3154-3162

  Della Longa, S ^a   Pin, S ^b   Cortes R ^c   Soldatov, A V ^d   Alpert, B ^b  

^a UNIVERSITY OF L'AQUILA   (Italy)

^b INST DE BIOLOGIE PHYSICO CHIMIQUE   (France)

^c UNIVERSITÉ PARIS SACLAY   (France)

^d SOUTHERN FEDERAL UNIVERSITY   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

FERRIC ION; MYOGLOBIN;

ABSORPTION SPECTROPHOTOMETRY; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; HEART; HORSE; NONHUMAN; PH; PROTEIN CONFORMATION; PROTEIN STRUCTURE; TEMPERATURE DEPENDENCE; X RAY DIFFRACTION; X RAY SPECTROMETRY;

ANIMALIA; EQUUS CABALLUS;

EID: 0031793036     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(98)77757-4     Document Type: Article

References (43)

1. Ansari, A., J. Berendzen, D. Braunstein, B. R. Cowen, H. Frauenfelder, M. K. Hong, I. E. T. Iben, B. Johnson, P. Ormos, T. B. Sauke, R. Scholl, A. Schulte, P. J. Steinbach, J. Vittitow, and R. D. Young. 1987. Rebinding and relaxation in the myoglobin pocket. Biophys. Chem. 26: 337-355.
2. Antonini, E., and M. Brumori. 1971. Hemoglobin and myoglobin in their reactions with ligands. North-Holland Publ. Co., London. 27:541-548.
3. Asher, S. A., and T. M. Shuster. 1979. Resonance Raman examination of axial ligand bonding and spin-state equilibria in metmyoglobin hydroxide and other heme derivatives. Biochemistry. 18:5377-5387.
4. Beetlestone, J., and P. George. 1964. A magnetic study of equilibria between high and low spin states of metmyoglobin complexes. Biochemistry. 3:707-714.
5. Bersuker, I. B., and S. S. Stavrov. 1988. Structure and properties of metalloporphyrins and hemoproteins: the vibronic approach. Coord. Chem. Rev. 88:1-68.
6. Bianconi, A., A. Congiu-Castellano, P. J. Durham, S. S. Hasnain, and S. Phillips. 1985. The CO bond angle of carboxymyoglobin determined by angular-resolved XANES spectroscopy, Nature. 318:685-687.
7. Bratkovsky, A. M., S. N. Rashkeev, A. V. Smirnov, and G. Wendin. 1994. Universality in electronic structure and EELS spectra of FeB and NiB crystalline and amorphous systems. Europhys. Lett. 26:43-49.
8. Caughey, W. S. 1967. Porphyrin proteins and enzymes. Annu. Rev. Biochem. 36:611-644.
9. Champion, P. M. 1989. Resonance Raman and site-directed mutagenesis studies of myoglobin dynamics. In Protein Structure and Engineering. O. Jardetzky, editor. Plenum Press, New York. 347-354.
10. Chance, M. R., L. J. Parkhurst, L. Powers, and B. Chance. 1986. Movement of the Fe with respect to the heme plane in the R-T transition of carp hemoglobin. J. Biol. Chem. 261:5689-5692.
11. Chance, M. R., L. M. Miller, R. F. Fischetti, E. Scheuring, W. X. Huang, B. Sclavi, H. Yang, and M. Sullivan. 1996. Global mapping of structural solutions provided by the extended x-ray absorption fine structure ab initio code FEFF 6.01: structure of the cryogenic photoproduct of the myoglobin-carbon monoxide complex. Biochemistry. 35:9014-9023.
12. Congiu-Castellano, A. 1987. Oxygen binding site structure in hemoproteins by XANES. In Biophysics and Synchrotron Radiation. A. Bianconi and A. Congiu-Castellano, editors. Springer Series in Biophysics, Vol. 2. Springer, Berlin-Heidelberg-New York. 89-93.
13. D'Alba, G., P. Fornasini, F. Rocca, and S. Mobilio. 1990. Temperature dependence of the EXAFS Debye-Waller factors of AgI. In Conf. Proc. Vol. 25 2nd Eur. Conf. on Progress in X-ray Synchrotron Radiation Research. A. Balerna, E. Bernieri, and S. Mobilio, editors. SIF, Bologna. 801-804.
14. Della Longa, S., I. Ascone, A. Fontaine, A. Congiu-Castellano, and A. Bianconi 1994. Intermediate states in ligand photodissociation of carboxymyoglobin by dispersive x-ray absorption. Eur. Biophys. J. 23: 330-335.
15. Della Longa, S., A. Bianconi, L. Palladino, B. Simonelli, A. Congiu-Castellano, E. Borghi, M. Barteri, M. Beltramini, G. P. Rocco, B. Salvato, L. Bubacco, R. S. Magliozzo, and J. Peisach. 1993. A XANES study of metal coordination in Co(II)-substituted Carcinus maenas hemocyanin. Biophys. J. 65:2680-2691.
16. Della Longa, S., M. Girasole, A. Congiu-Castellano, A. Bianconi, A. P. Kovtun, and A. V. Soldatov. 1998. Spin-resolved x-ray absorption near edge structure (XANES) of metmyoglobin. Eur. Biophys. J. 27:541-548.
17. Della Longa, S., A. Soldatov, M. Pompa, and A. Bianconi. 1995. Atomic and electronic structure probed by x-ray absorption spectroscopy: full multiple scattering analysis with the G4XANES package. Comput. Mat. Sci. 4:199-210.
18. Doster, W., S. Kusack, and W. Petry. 1989. Dynamic transition of myoglobin revealed by inelastic neutron scattering. Nature. 337:754-756.
19. Durham, P., J. B. Pendry, and C. H. Hodges. 1982. Calculation of x-ray absorption near edge structure, XANES. Comput. Phys. Commun. 25: 193-200.
20. Eaton, W. A., and J. Hofrichter. 1981. Polarized absorption and linear dichroism spectroscopy of hemoglobin. Methods Enzymol. 76:175-261.
21. Evans, S. V., and G. D. Brayer. 1990. Horse heart metmyoglobin. J. Biol. Chem. 263:4263-4268.
22. Filipponi, A., A. Di Cicco, T. A. Tyson, and C. R. Natoli. 1991. Ab initio modelling of x-ray absorption spectra. Solid State Commun. 78: 256-262.
23. Frauenfelder, H., F. Parak, and R. D. Young. 1988. Conformational substates in protein. Ann. Rev. Biophys. Biophys. Chem. 17:451-479.
24. Hartmann, H., F. Parak, W. Steigemann, C. A. Petsko, D. Ringe Ponzi, and H. Frauenfelder. 1982. Conformational substrates in a protein: structure and dynamics of metmyoglobin at 80K. Proc. Natl. Acad. Sci. USA. 79:4967-4971.
25. Iizuka, T., and M. Kotani. 1969. Analysis of thermal equilibrium between high-spin and low-spin states of ferrimyoglobin complexes. Biochim. Biophys. Acta. 181:275-286.
26. Kirkpatrick, S., C. G. Gelatt, Jr., and M. P. Vecchi. 1983. Optimization by simulated annealing. Science. 220:671-680.
27. Kotani, M. 1968. Paramagnetic properties and electronic structure of iron in heme proteins. Adv. Quantum Chem. 4:227-265.
28. Oyanagi, H., T. Iizuka, T. Matsushita, S. Saigo, R. Makino, Y. Ishimura, and T. Ishiguro. 1987. Local structure of heme-iron studied by high-resolution XANES: thermal spin equilibrium in myoglobin. J. Phys. Soc. Jpn. 56:3381-3388.
29. Parak, F., H. Hartmann, K. D. Aumann, H. Reuscher, G. Rennekamp, H. Bartunik, and W. Steigemann. 1987. Low temperature x-ray investigation of structural distributions in myoglobin. Eur. Biophys. J. 15: 237-249.
30. Perutz, M. F. 1979. Regulation of oxygen affinity of hemoglobin. Annu. Rev. Biochem. 48:327-386.
31. Perutz, M. F., H. Muirhead, J. N. Cox, and L. C. G. Goaman. 1968. Three-dimensional Fourier synthesis of horse oxyhaemoglobin at 2.8 Å resolution: the atomic model. Nature. 219:131-139.
32. Phillips, S. E. V. 1980. Structure and refinement of oxymyoglobin at 1.6 Å resolution. J. Mol. Biol. 142:531-554.
33. Pin, S., B. Alpert, A. Congiu-Castellano, S. Della Longa, and A. Bianconi. 1994a. XAS spectroscopy of hemoglobin. Methods Enzymol. 232: 266-292.
34. Pin, S., B. Alpert, R. Cortes, I. Ascone, H. L. Chiu, and S. G. Sligar. 1994b. The heme iron coordination complex in His 64 (E7) Tyr recombinant sperm whale myoglobin. Biochemistry. 33:11618-11623.
35. Pin, S., V. Le Tilly, B. Alpert, and R. Cortes. 1989. XANES spectroscopy sensitivity to small electronic changes: case of carp azidomethemoglobin. FEBS Lett. 242:401-404.
36. 2 structures. Biochemistry. 26: 4699-4707.
37. Schlichting, I., J. Berendzen, G. N. Phillips, and R. M. Sweet. 1994. Crystal structure of photolysed carbonmonoxy-myoglobin. Nature. 371:808-812.
38. Takano, T. 1977. Structure of myoglobin refined at 2.0 Å resolution. J. Mol. Biol. 110:537-568.
39. Teng, T.-Y., V. Srajer, and K. Moffat. 1994. Photolysis-induced structural changes in single crystals of carbonmonoxy myoglobin at 40 K. Nature Struct. Biol. 1:701-705.
40. Weiss, J. J. 1964. Nature of the iron-oxygen bond in oxyhaemoglobin. Nature. 202:83-84.
41. Westre, T. E., A. Di Cicco, A. Filipponi, C. R. Natoli, B. Hedman, E. I. Solomon, and K. O. Hodgson. 1994. Determination of the Fe-N-O angle in {FeNO}7 complexes using multiple scattering EXAFS analysis by GNXAS. J. Am. Chem. Soc. 116:6757-6762.
42. 1H-NMR study of inter-segmental hydrogen bonds in sperm whale and horse apomyoglobins. Eur. J. Biochem. 243:292-298.
43. Yonetani, T., T. Iizuka, and M. R. Waterman. 1971. Studies on modified hemoglobins. J. Biol. Chem. 246:7683-7689.