Detection of 28S RNA with the FGF-2 cDNA at high stringency through related G/C-rich sequences

Molecular and Cellular Biochemistry

Volumn 189, Issue 1-2, 1998, Pages 33-39

  Cattini, P A ^a   Jin, Y ^a   Sheikh, F ^a  

^a UNIVERSITY OF MANITOBA   (Canada)

Author keywords

28S RNA; 5' Untranslated sequences; Rat FGF 2; RNA blotting

Indexed keywords

COMPLEMENTARY DNA; FIBROBLAST GROWTH FACTOR; POLYADENYLATED RNA; RNA 28S;

ANIMAL CELL; ARTICLE; CONTROLLED STUDY; DNA FLANKING REGION; DNA PROBE; DNA SEQUENCE; NONHUMAN; RAT; RNA ANALYSIS; SEQUENCE HOMOLOGY;

ANIMALIA;

EID: 0031791246     PISSN: 03008177     EISSN: None     Source Type: Journal    
DOI: 10.1023/a:1006852312188     Document Type: Article

References (30)

1. Kardami E, Liu L, Pasumarthi SKB, Doble BW, Cattini PA: Regulation of basic fibroblast growth factor (bFGF) and FGF receptors in the heart. Ann NY Acad Sci 752: 352-369, 1995
2. Bikfalvi A, Klein S, Pintucci G, Rifkin DB: Biological roles of fibroblast growth factor-2. Endocrine Rev 18: 26-45, 1997
3. Baird A: Fibroblast growth factors: Activities and significance of non-neurotrophin neurotrophic growth factors. Curr Opin Neurobiol 4: 78-86, 1994
4. Florkiewics RZ, Sommer A: Human basic fibroblast growth factor gene encodes four polypeptides: Three initiate translation from non-AUG codons. Proc Natl Acad Sci USA 86: 3978-3981, 1989
5. Powell PP, Klagsbrun M: Three forms of rat basic fibroblast growth factor are made from a single mRNA and localize to the nucleus. J Cell Physiol 148: 202-210, 1991
6. Prats H, Kaghad M, Prats AC, Klagsbrun M, Lelias JM, Liausun P, Chalon P, Tauber JP, Amalric F, Smith JA, Caput D: High molecular mass forms of basic fibroblast growth factor are initiated by alternative CUG codons. Proc Natl Acad Sci USA 86: 1836-1840, 1989
7. Kurokawa T, Sasada R, Iwane M, Igarashi K: Cloning and expression of cDNA encoding human basic fibroblast growth factor. FEBS Lett 213: 189-194, 1987
8. Murphy PR, Sato Y, Sato R, Friesen HG: Regulation of multiple basic FGF mRNA transcripts by protein kinase C activators. Mol Endocrinol 2: 1196-1201, 1988
9. Kimelman D, Kirschner MW: An antisense m RNA directs the covalent modification of the transcript encoding fibroblast growth factor in Xenopus oocytes. Cell 59: 687-696, 1989
10. Goldsmith KT, Gammon RB, Garver RI: Modulation of bFGF in lung fibroblasts by TGF-β and PDGF. Am J Physiol 261 (Lung Cell Mol Physiol 5): L378-L385, 1991
11. Powell PP, Finklestein SP, Dionne CA, Jaye M, Klagsbrun M: Temporal, differential and regional expression of mRNA for basic fibroblast growth factor in the developing and adult rat brain. Brain Res Mol Brain Res 11: 71-77, 1991
12. Logan A, Black EG, Gonzales AM, Buscaglia M, Sheppard MC: Basic fibroblast growth factor: an autocrine mitogen of rat thyroid follicular cells? Endocrinol 130: 2363-2372, 1992
13. Borja AZM, Meijers C, Zeller R: Expression of alternatively spliced bFGF first coding exons and antisense mRNAs during chicken embryogenesis. Dev Biol 157: 110-118, 1993
14. Hurley MM, Abreu A, Gronowicz G, Kawaguchi H, Lorenzo J: Expression and regulation of basic fibroblast growth factor mRNA levels in mouse osteoblastic MC3T3-E1 cells. J Biol Chem 269: 9392-9396, 1994
15. Stachowiak MIC, Moffett J, Joy A, Puchacz E, Florkiewicz R, Stachowiak EK: Regulation of bFGF gene expression and subcellular distribution of bFGF protein in adrenal medullary cells. J Cell Biol: 127: 203-223, 1994
16. Pasumarthi KBS, JinY, Cattini PA: Cloning of the rat fibroblast growth factor -2 promoter region and its response to mitogenic stimuli in glioma C6 cells. J Neurochem 68: 898-908, 1997
17. Murphy PR, Guo JZ, Friesen HG: Messenger RNA stabilisation accounts for elevated basic fibroblast growth factor transcript levels inhuman astrocytoma cell line. Mol Endocrino 4: 196-200, 1990
18. Peifley KA, Alberts GF, Hsu DK, Feng SL, Winkles JA, Heparin-binding epidennal growth factor-like growth factor regulates fibroblast growth factor-2 expression in aortic smooth muscle cells. Circ Res 79: 263-270, 1996
19. Murphy PR, Knee RS: Identification and characterization of an antisense RNA Transcript (gfg) from the human basic fibroblast growth factor gene. Mol Endocrinol 8: 852-859, 1994
20. Chomcsyski P, Sacchi N: Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159, 1987
21. Maniatis T, Fritsch EF, Sambrook J: Molecular Cloning: A laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 1987
22. Shimasaki S, Emoto N, Koba A, Mercado M, Shibata F, Cooksey K, Baird A, Ling N: Complementary DNA cloning and sequencing of rat ovarian basic fibroblast growth factor and tissue distribution study of itsmRNA. Biochem Biophys Res Comm 157: 256-263, 1988
23. Pasumarthi KBS, Doble BW, Kardami E, Cattini PA: Over-expression of CUG- or AUG-initiated forms of basic fibroblast growth factor in cardiac myocytes results in similar effects on mitosis and protein synthesis but distinct nuclear morphologies. J Mol Cell Cardiol 26: 1045-1060, 1994
24. Chan YL, Olvera J, Wool IG: The structure of rat 28S ribosomal ribonucleic acid inferred from the sequence of nucleotides in a gene. Nucl Acids Res 11: 7819-7831, 1983
25. Safrany G, Kominami R, Muramatsu M, Hidvegi EJ: Transcription of human ribosomal DNA may terminate at multiple sites. Gene 79: 299-307, 1989
26. Michot B, Bachellerie J-PP, Raynal F: Sequence and secondary structure of mouse 28SrRNA 5′terminal domain. Organisation of the 5.8S-28S rRNA complex. Nucl Acids Res 10: 5272-5283, 1982
27. Bodkin DK, Knudson DL: Sequence relatedness of Palyam virus genes to cognates of the Palyam serogroup viruses by RNA-RNA blot hybridisation. Virology 143: 55-62, 1985
28. Dangler CA: Nucleic Acid Analysis: Principles and Bioapplications, Wiley-Liss, New York, 1996, pp 24-25
29. Abraham JA, Mergia A, Whang JL, Tuomolo A, Friedman J, Hjerrild KA, Gospodarowics D, Fiddes JC: Nucleotide sequence of a bovine clone encoding the angiogenic protein, basic fibroblast growth factor. Science 233: 545-548, 1986
30. Kurokawa T, Seno M, Igarashi K: Nucleotide sequence of rat basic fibroblast growth factor cDNA. Nucl Acids Res 16: 5201, 1988