Analysis of factors influencing kinetics of herpes simplex virus transcription utilizing recombinant virus

Methods: A Companion to Methods in Enzymology

Volumn 16, Issue 1, 1998, Pages 105-116

  Wagner, Edward K ^a   Petroski, Matthew D ^a   Pande, Nupur T ^a   Lieu, Pauline T ^a   Rice, Marcia ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CIS ACTING ELEMENT; IMMEDIATE EARLY PROTEIN;

ARTICLE; CONSENSUS SEQUENCE; DNA REPLICATION; HERPES SIMPLEX VIRUS 1; KINETICS; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; SEQUENCE HOMOLOGY; TATA BOX; VIRUS RECOMBINANT; VIRUS TRANSCRIPTION;

DNA VIRUSES; HERPES; HUMAN HERPESVIRUS 1; MAMMALIA; SIMPLEXVIRUS;

EID: 0031790571     PISSN: 10462023     EISSN: None     Source Type: Journal    
DOI: 10.1006/meth.1998.0648     Document Type: Article

References (64)

1. Wagner, E. K., Guzowski, J. F., and Singh, J. (1995) in Progress in Nucleic Acid Research and Molecular Biology (Cohen, W. E., and Moldave, K., Eds.), pp. 123-168, Academic Press, San Diego.
2. Sandri-Goldin, R. M. (1998) Methods Companion Methods Enzymol. 16, in press.
3. Wagner, E. K. (1991) in Herpesvirus Transcription and Its Regulation (Wagner, E. K., Ed.), pp. 1-15, CRC Press, Boca Raton.
4. Wagner, E. K. (1985) in The Herpesviruses (Roizman, B., Ed.), Vol. 3, pp. 45-104, Plenum Press, New York.
5. Flanagan, W. M., Papavassiliou, A. G., Rice, M., Hecht, L. B., Silverstein, S. J., and Wagner, E. K. (1991) J. Virol. 65, 769-786.
6. Guzowski, J. F., Singh, J., and Wagner, E. K. (1994) J. Virol. 68, 7774-7789.
7. Singh, J., and Wagner, E. K. (1995) Virus Genes 10, 127-136.
8. Huang, C., and Wagner, E. K. (1994) J. Virol. 68, 5738-5747.
9. Huang, C. J., and Wagner, E. K. (1994) J. Virol. 68, 5738-5747.
10. Huang, C. J., Goodart, S. A., Rice, M. K., Guzowski, J. F., and Wagner, E. K. (1993) J. Virol. 67, 5109-5116.
11. Huang, C. J., Petroski, M. D., Pande, N. T., Rice, M. K., and Wagner, E. K. (1996) J. Virol. 70, 1898-1904.
12. Guzowski, J. F., and Wagner, E. K. (1993) J. Virol. 67, 5098-5108.
13. Goodart, S. A., Guzowski, J. F., Rice, M. K., and Wagner, E. K. (1992) J. Virol. 66, 2973-2981.
14. Huang, C., Goodart, S. A., Rice, M. K., Guzowski, J. F., and Wagner, E. K. (1993) J. Virol. 67, 5109-5116.
15. Pande, N. T. (1997) Ph.D. dissertation, University of California, Irvine.
16. Zhang, Y. F., and Wagner, E. K. (1987) Virus Genes 1, 49-60.
17. Ramsey-Ewing, A., van Wijnen, A. J., Stein, G. S., and Stein, J. L. (1994) Proc. Natl. Acad. Sci. USA 91, 4475-4479.
18. Stein, G. S., Stein, J. L., van Wijnen, A. J., and Lian, J. B. (1994) J. Cell Biochem. 54, 393-404.
19. van Wijnen, A. J., Bidwell, J. P., Fey, E. G., Penman, S., Lian, J. B., Stein, J. L., and Stein, G. S. (1993) Biochemistry 32, 8397-8402.
20. van Wijnen, A. J., Ramsey-Ewing, A. L., Bortell, R., Owen, T. A., Lian, J. B., Stein, J. L., and Stein, G. S. (1991) J. Cell Biochem. 46, 174-189.
21. van den Ent, F. M., van Wijnen, A. J., Last, T. J., Bortell, R., Stein, J. L., Lian, J. B., and Stein, G. S. (1993) Cancer Res. 53, 2399-2409.
22. McKnight, S. L., and Kingsbury, R. (1982) Science 217, 316-324.
23. McKnight, S. L., Gavis, E. R., Kingsbury, R., and Axel, R. (1981) Cell 25, 385-398.
24. Bucher, P. (1990) J. Mol. Biol. 212, 563-578.
25. Corden, J., Wasylyk, B., Buchwalder, A., Sassone-Corsi, P., Kedinger, C., and Chambon, P. (1980) Science 209, 1406-1414.
26. McKnight, S. L. (1982) Cell 31, 355-365.
27. 25a.Petroski, M. D., and Wagner, E. K. (1998) J. Virol. 72, in press.
28. Smale, S. T., and Baltimore, D. (1989) Cell 57, 103-113.
29. Smith, C. A., Bates, P., Rivera-Gonzalez, R., Gu, B., and DeLuca, N. A. (1993) J. Virol. 67, 4676-4687.
30. Das, G., Hinkley, C. S., and Herr, W. (1995) Nature 374, 657-660.
31. Zawel, L., and Reinberg, D. (1995) Annu. Rev. Biochem. 64, 533-561.
32. Mitchell, P. J., and Tjian, R. (1989) Science 245, 371-378.
33. Carcamo, J., Lobos, S., Merino, A., Buckbinder, L., Weinmann, R., Natarajan, V., and Reinberg, D. (1989) J. Biol. Chem. 264, 7704-7714.
34. Zenzie-Gregory, B., O'shea-Greenfield, A., and Smale, S. T. (1992) J. Biol. Chem. 267, 2823-2830.
35. Yean, D., and Gralla, J. (1997) Mol. Cell Biol. 17, 3809-3816.
36. Weber, J. A., Taxman, D. J., Lu, Q., and Gilmour, D. S. (1997) Mol. Cell Biol. 17, 3799-3808.
37. Kadonaga, J. T. (1990) J. Biol. Chem. 265, 2624-2631.
38. Cook, W. J., Gu, B., DeLuca, N. A., Moynihan, E. B., and Coen, D. M. (1995) Mol. Cell. Biol. 15, 4998-5006.
39. Colgan, J., and Manley, J. L. (1992) Genes Dev. 6, 304-315.
40. Shapira, M., Homa, F. L., Glorioso, J. C., and Levine, M. (1987) Nucleic Acids Res. 15, 3097-3111.
41. Imbalzano, A. N., and DeLuca, N. A. (1992) J. Virol. 66, 5453-5463.
42. Everett, R. D. (1984) Nucleic Acids Res. 7, 3037-3056.
43. Steffy, K. R., and Weir, J. P. (1991) J. Virol. 65, 6454-6460.
44. Grazia Romanelli, M., Mavromara-Nazos, P., Spector, D., and Roizman, B. (1992) J. Virol. 66, 4855-4863.
45. Weir, J. P., and Narayanan, P. R. (1990) J. Virol. 64, 445-449.
46. Hill, J. M., Dudley, J. B., Shimomura, Y., and Kaufman, H. E. (1986) Curr. Eye Res. 5, 241-246.
47. Pederson, N. E., Person, S., and Homa, F. L. (1992) J. Virol. 66, 6226-6232.
48. Sethna, M., and Weir, J. P. (1993) Virology 196, 532-540.
49. Roy, A. L., Meisterernst, M., Pognonec, P., and Roeder, R. G. (1991) Nature 354, 245-248.
50. Du, H., Roy, A. L., and Roeder, R. G. (1993) EMBO J. 12, 501-511.
51. Margolis, D. M., Ostrove, J. M., and Straus, S. E. (1993) Virology 192, 370-374.
52. Nakatani, Y., Brenner, M., and Freese, E. (1990) Proc. Natl. Acad. Sci. USA 87, 4289-4293.
53. Wagner, E. K., and Bloom, D. C. (1997) Clin. Microbiol. Rev. 10, 419-443.
54. Burke, T. W., and Kadonaga, J. T. (1997) Genes Dev. 11, 3020-3031.
55. Burke, T. W., and Kadonaga, J. T. (1997) Genes Dev. 10, 711-724.
56. Griffin, W., Torrance, H., Rodda, D. J., Prefontaine, G. G., Pope, L., and Hache, R. J. (1996) Nature 380, 265-268.
57. Kibler, P. K., Duncan, J., Keith, B. D., Hupel, T., and Smiley, J. R. (1991) J. Virol. 65, 6749-6760.
58. Pal, S. K., Zinkel, S. S., Kiessling, A. A., and Cooper, G. M. (1991) Mol Cell. Biol. 11, 5190-5196.
59. Moura-Neto, R., Dudov, K P., and Perry, R. P. (1989) Proc. Natl. Acad. Sci. USA 86, 3997-4001.
60. Bourachot, B., Yaniv, M., and Herbomel, P. (1989) J. Virol. 63, 2567-2577.
61. Nakatani, Y., Horikoshi, M., Brenner, M., Yamamoto, T., Besnard, F., Roeder, R. G., and Freese, E. (1990) Nature 348, 86-88.
62. Purnell, B. A., and Gilmour, D. S. (1993) Mol. Cell. Biol. 13, 2593-2603.
63. Fridell, Y. W., and Searles, L. L. (1992) Mol. Cell. Biol. 12, 4571-4577.
64. Bloom, D. C., and Jarman, R. G. (1998) Methods Companion Methods Enzymol. 16, in press.