Application of random amplified polymorphic DNA analysis to differentiate strains of Salmonella typhi and other Salmonella species

Journal of Applied Microbiology

Volumn 85, Issue 4, 1998, Pages 693-702

  Shangkuan, Y H ^a   Lin, H C ^a  

^a NATIONAL DEFENSE MEDICAL CENTER   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; EXTRACTION;

DNA EXTRACTION; DNA FINGERPRINTING; EXTRACTION PROCEDURE; FINGERPRINTING METHODS; POLYMORPHIC DNA; RANDOM AMPLIFIED POLYMORPHIC DNA ANALYSIS; SALMONELLA TYPHI; SEROTYPES; SIMPLE++; VACCINE STRAINS;

SALMONELLA;

BACTERIAL DNA;

ARTICLE; BACTERIUM ISOLATION; DNA SEQUENCE; NONHUMAN; POLYMERASE CHAIN REACTION; RANDOM AMPLIFIED POLYMORPHIC DNA; SALMONELLA; SALMONELLA TYPHI; SEROTYPE; STRAIN DIFFERENCE; TYPHOID FEVER;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PROKARYOTA; SALMONELLA; SALMONELLA TYPHI;

EID: 0031787219     PISSN: 13645072     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2672.1998.00582.x     Document Type: Article

References (24)

1. Akopyanz, N., Bukanov, N.O., Westblom, T.U., Kresovich, S. and Berg, D.E. (1992) DNA diversity among clinical isolates of Helicobacter pylori detected by PCR-based RAPD fingerprinting. Nucleic Acids Research 20, 5137-5142.
2. Altwegg, M., Hickmann-Brenner, F.W. and Farmer, J.J., III (1989) Ribosomal RNA gene restriction patterns provide increased sensitivity for typing Salmonella typhi strains. Journal of Infectious Diseases 160, 145-149.
3. Barry, T., Powell, R. and Gannon, F. (1990) A general method to generate DNA probes for microorganisms. Biotechnology 8, 233-236.
4. Ellsworth, D.L., Rittenhouse, K.D. and Honeycutt, R.L. (1993) Artifactual variation in randomly amplified polymorphic DNA handing patterns. Biotechniques 14, 214-217.
5. Gruner, E., Flepp, M., Gabathuler, U., Thong, K.L. and Altwegg, M. (1997) Outbreak of typhoid lever in a non-endemic area: comparison of three molecular typing methods. Journal of Microbiological Methods 28, 179-185.
6. Hermans, P.W.M., Saha, S.K., van Leeuwen, W.J., Verbrugh, H.A., van Belkum, A. and Goessens, W.H.F. (1996) Molecular typing of Salmonella typhi strains from Dhaka (Bangladesh) and development of DNA probes identifying plasmid-encoded multi-drug-resistant isolates. Journal of Clinical Microbiology 34, 1373-1379.
7. Hickman-Brenner, F.W., Farmer, J.J., III and Regional Centers for Salmonella typhi Bacteriophage Typing in the United States (1983) Bacteriophage types of Salmonella typhi in the United States from 1974 through 1981. Journal of Clinical Microbiology 17, 172-174.
8. Hilton, A.C., Banks, J.G. and Penn, C.W. (1996) Random amplification of polymorphic DNA (RAPD) of Salmonella: strain differentiation and characterization of amplified sequences. Journal of Applied Bacteriology 81, 575-584.
9. Hilton, A.C., Banks, J.G. and Penn, C.W. (1997) Optimization of RAPD for fingerprinting Salmonella. Letters in Applied Microbiology 24, 243-248.
10. Lin, A.W., Usera, M.A., Barrett, T.J. and Goldsby, R.A. (1996) Application of random amplified polymorphic DNA analysis to differentiate strains of Salmonella enteritidis. Journal of Clinical Microbiology 34, 870-876.
11. Liu, P.Y.-F., Lau, Y.-J., Hu, B.-S. et al. (1995) Analysis of clonal relationships among isolates of Shigella sonnei by different molecular typing methods. Journal of Clinical Microbiology 33, 1779-1783.
12. McKenna, A.J., Bygraves, J.A., Maiden, M.C.J. and Feavers, I.M. (1995) Attenuated typhoid vaccine Salmonella typhi Ty21a: fingerprinting and quality control. Microbiology 141, 1993-2002.
13. Nair, S., Poh, C.L., Lim, Y.S., Tay, L. and Goh, K.T. (1994) Genome fingerprinting of Salmonella typhi by pulsed-field gel electrophoresis for subtyping common phage types. Epidemiology and Infection 113, 391-402.
14. Nastasi, A., Mammina, C. and Villafrate, M.R. (1991) rDNA fingerprinting as a tool in epidemiological analysis of Salmonella typhi infections. Epidemiology and Infection 107, 565-576.
15. Navarro, F., Llovet, T., Echeita, M.A. et al. (1996) Molecular typing of Salmonella enterica serovar Typhi. Journal of Clinical Microbiology 34, 2831-2834.
16. Pang, T., Bhutta, Z.A., Finlay, B.B. and Altwegg, M. (1995) Typhoid fever and other salmonellosis: a continuing challenge. Trends in Microbiology 3, 253-255.
17. Reeves, M.W., Evins, G.M., Heiba, A.A., Plikaytis, B.D. and Farmer, J.J. III (1989) Clonal nature of Salmonella typhi and its genetic relatedness to other Salmonellae as shown by multilocus enzyme electrophoresis and proposal of Salmonella bongori comb. nov. Journal of Clinical Microbiology 27, 313-320.
18. Selander, R.K., Beltran, P., Smith, N.H. et al. (1990) Evolutionary genetic relationships of clones of Salmonella serovars causing human typhoid and other enteric fevers. Infection and Immunity 58, 2262-2275.
19. Shangkuan, Y.H., Tsao, C.M. and Lin, H.C. (1997) Comparison of Vibrio cholerae O1 isolates by polymerase chain reaction fingerprinting and ribotyping. Journal of Medical Microbiology 46, 941-948.
20. Thong, K.L., Cheong, V.M., Puthucheary, S., Koh, C.L. and Pang, T. (1994) Epidemiological analysis of sporadic Salmonella typhi isolates and those from outbreaks by pulsed-field gel electrophoresis. Journal of Clinical Microbiology 32, 1135-1141.
21. Thong, K.L., Puthucheary, S., Yassin, R.M. et al. (1995) Analysis of Salmonella typhi isolates from Southeast Asia by pulsed-field gel electrophoresis. Journal of Clinical Microbiology 33, 1938-1941.
22. Van Lith, L.A.J.T. and Aarts, H.J.M. (1994) Polymerase chain reaction identification of Salmonella serotypes. Letters in Applied Microbiology 19, 273-276.
23. Welsh, J. and McClelland, M. (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Research 18, 7213-7218.
24. Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A. and Tingey, S.V. (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Research 18, 6531-6535.