-
1
-
-
0014581827
-
The genetic code and error transmission
-
Alff-Steinberger C (1969) The genetic code and error transmission. Proc Natl Acad Sci USA 64:584-591
-
(1969)
Proc Natl Acad Sci USA
, vol.64
, pp. 584-591
-
-
Alff-Steinberger, C.1
-
2
-
-
0025878149
-
Amino acid substitution matrices from an information theoretic perspective
-
Altschul S (1991) Amino acid substitution matrices from an information theoretic perspective. J Mol Biol 219:555-565
-
(1991)
J Mol Biol
, vol.219
, pp. 555-565
-
-
Altschul, S.1
-
3
-
-
0028092214
-
Amino acid substitution during functionally constrained divergent evolution of protein sequences
-
Benner S, Cohen M, Gonnet G (1994) Amino acid substitution during functionally constrained divergent evolution of protein sequences. Protein Eng 7(11):1323-1332
-
(1994)
Protein Eng
, vol.7
, Issue.11
, pp. 1323-1332
-
-
Benner, S.1
Cohen, M.2
Gonnet, G.3
-
4
-
-
0014378880
-
The origin of the genetic code
-
Crick F (1968) The origin of the genetic code. J Mol Biol 38:367-379
-
(1968)
J Mol Biol
, vol.38
, pp. 367-379
-
-
Crick, F.1
-
7
-
-
0013914739
-
A further study of misreading of codons induced by streptomycin and neomycin using ribopolynucleotides containing two nucleotides in alternating sequence as templates
-
Davies J, Jones D, Khorana H (1966) A further study of misreading of codons induced by streptomycin and neomycin using ribopolynucleotides containing two nucleotides in alternating sequence as templates. J Mol Biol 18:48-57
-
(1966)
J Mol Biol
, vol.18
, pp. 48-57
-
-
Davies, J.1
Jones, D.2
Khorana, H.3
-
8
-
-
0024745336
-
The extension reached by the minimization of the polarity distances during the evolution of the genetic code
-
Di Giulio M (1989a) The extension reached by the minimization of the polarity distances during the evolution of the genetic code. J Mol Evol 29:288-293
-
(1989)
J Mol Evol
, vol.29
, pp. 288-293
-
-
Di Giulio, M.1
-
9
-
-
0024438078
-
Some aspects of the organization and evolution of the genetic code
-
Di Giulio M (1989b) Some aspects of the organization and evolution of the genetic code. J Mol Evol 29:191-201
-
(1989)
J Mol Evol
, vol.29
, pp. 191-201
-
-
Di Giulio, M.1
-
10
-
-
0028275445
-
On the optimization of the physicochemical distances between amino acids in the evolution of the genetic code
-
Di Giulio M (1994) On the optimization of the physicochemical distances between amino acids in the evolution of the genetic code. J Theor Biol 168:43-51
-
(1994)
J Theor Biol
, vol.168
, pp. 43-51
-
-
Di Giulio, M.1
-
11
-
-
0029449631
-
The phylogeny of tRNAs seems to confirm the predictions of the coevolution theory of the origin of the genetic code
-
Di Giulio M (1995a) The phylogeny of tRNAs seems to confirm the predictions of the coevolution theory of the origin of the genetic code. Orig Life Evol Biosph 25:549-564
-
(1995)
Orig Life Evol Biosph
, vol.25
, pp. 549-564
-
-
Di Giulio, M.1
-
12
-
-
0028857719
-
Was it an ancient gene codifying for a hairpin RNA that, by means of direct duplication, gave rise to the primitive tRNA molecule?
-
Di Giulio M (1995b) Was it an ancient gene codifying for a hairpin RNA that, by means of direct duplication, gave rise to the primitive tRNA molecule? J Theor Biol 177:95-101
-
(1995)
J Theor Biol
, vol.177
, pp. 95-101
-
-
Di Giulio, M.1
-
15
-
-
0029832218
-
RNA-catalyzed RNA polymerization using nucleoside triphosphates
-
Ekland E, Bartel DP (1996) RNA-catalyzed RNA polymerization using nucleoside triphosphates. Nature 382(6589):373-376
-
(1996)
Nature
, vol.382
, Issue.6589
, pp. 373-376
-
-
Ekland, E.1
Bartel, D.P.2
-
16
-
-
0014003909
-
Role of the amino-acid "code" and of selection for conformation in the evolution of proteins
-
Epstein C (1966) Role of the amino-acid "code" and of selection for conformation in the evolution of proteins. Nature 210(5031):25-28
-
(1966)
Nature
, vol.210
, Issue.5031
, pp. 25-28
-
-
Epstein, C.1
-
17
-
-
0024492327
-
Optimization and the genetic code
-
Figureau A (1989) Optimization and the genetic code. Orig Life Evol Biosph 19:57-67
-
(1989)
Orig Life Evol Biosph
, vol.19
, pp. 57-67
-
-
Figureau, A.1
-
18
-
-
0013888042
-
Evidence suggesting a partial, internal duplication in the ancestral gene for heme-containing globins
-
Fitch W (1966) Evidence suggesting a partial, internal duplication in the ancestral gene for heme-containing globins. J Mol Biol 16:1
-
(1966)
J Mol Biol
, vol.16
, pp. 1
-
-
Fitch, W.1
-
19
-
-
0023471213
-
The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code
-
Fitch W, Upper K (1987) The phylogeny of tRNA sequences provides evidence for ambiguity reduction in the origin of the genetic code. Cold Spring Harbor Symp Quant Biol 52:759-767
-
(1987)
Cold Spring Harbor Symp Quant Biol
, vol.52
, pp. 759-767
-
-
Fitch, W.1
Upper, K.2
-
20
-
-
0020528412
-
What is a conservative substitution?
-
French S, Robson B (1983) What is a conservative substitution? J Mol Evol 19:171-175
-
(1983)
J Mol Evol
, vol.19
, pp. 171-175
-
-
French, S.1
Robson, B.2
-
22
-
-
0014024955
-
Genetic code: Aspects of organization
-
Goldberg AL, Wittes R (1966) Genetic code: aspects of organization. Science 153:420-424
-
(1966)
Science
, vol.153
, pp. 420-424
-
-
Goldberg, A.L.1
Wittes, R.2
-
23
-
-
0027484262
-
Further results on error minimization in the genetic code
-
Goldman N (1993) Further results on error minimization in the genetic code. J Mol Evol 37:662-664
-
(1993)
J Mol Evol
, vol.37
, pp. 662-664
-
-
Goldman, N.1
-
24
-
-
0016197604
-
Amino acid difference formula to help explain protein evolution
-
Grantham R (1974) Amino acid difference formula to help explain protein evolution. Science 185:862-864
-
(1974)
Science
, vol.185
, pp. 862-864
-
-
Grantham, R.1
-
25
-
-
0000960472
-
On the physical basis for ambiguity in genetic coding interactions
-
Grosjean H, de Henau S, Crothers D (1978) On the physical basis for ambiguity in genetic coding interactions. Proc Natl Acad Sci USA 75(2):610-614
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, Issue.2
, pp. 610-614
-
-
Grosjean, H.1
De Henau, S.2
Crothers, D.3
-
26
-
-
0026327996
-
A quantitative measure of error minimization in the genetic code
-
Haig D, Hurst LD (1991) A quantitative measure of error minimization in the genetic code. J Mol Evol 33:412-417
-
(1991)
J Mol Evol
, vol.33
, pp. 412-417
-
-
Haig, D.1
Hurst, L.D.2
-
27
-
-
0028335134
-
Pattern generation in molecular evolution: Exploitation of the variation in RNA landscapes
-
Huynen M, Hogeweg P (1994) Pattern generation in molecular evolution: exploitation of the variation in RNA landscapes. J Mol Evol 39:71-79
-
(1994)
J Mol Evol
, vol.39
, pp. 71-79
-
-
Huynen, M.1
Hogeweg, P.2
-
28
-
-
0015881599
-
Arginine as an evolutionary intruder into protein synthesis
-
Jukes T (1973) Arginine as an evolutionary intruder into protein synthesis. Biochem Biophys Res Commun 53(3):709-714
-
(1973)
Biochem Biophys Res Commun
, vol.53
, Issue.3
, pp. 709-714
-
-
Jukes, T.1
-
29
-
-
0018191721
-
The genetic code as a periodic table
-
Juncgk J (1978) The genetic code as a periodic table. J Mol Evol 11:211-224
-
(1978)
J Mol Evol
, vol.11
, pp. 211-224
-
-
Juncgk, J.1
-
30
-
-
0026050396
-
Effect of base, pentose, and phosphodiester backbone structures on binding and repair of pyrimidine dimers by Escherichia coli dna photolyase
-
Kim S-T, Sancar A (1991) Effect of base, pentose, and phosphodiester backbone structures on binding and repair of pyrimidine dimers by Escherichia coli dna photolyase. Biochemistry 30(35):8623-8630
-
(1991)
Biochemistry
, vol.30
, Issue.35
, pp. 8623-8630
-
-
Kim, S.-T.1
Sancar, A.2
-
31
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
32
-
-
0014680905
-
Non-darwinian evolution
-
King J, Jukes T (1969) Non-darwinian evolution. Science 164:788-798
-
(1969)
Science
, vol.164
, pp. 788-798
-
-
King, J.1
Jukes, T.2
-
33
-
-
0030931016
-
Mutation matrices and physical-chemical properties: Correlations and implications
-
Koshi J, Goldstein R (1997) Mutation matrices and physical-chemical properties: correlations and implications. Proteins 27:336-344
-
(1997)
Proteins
, vol.27
, pp. 336-344
-
-
Koshi, J.1
Goldstein, R.2
-
34
-
-
0024349094
-
Strong inclination toward transitions in nucleotide substitutions by poliovirus replicase
-
Kuge S, Kawamura N, Nomoto A (1989) Strong inclination toward transitions in nucleotide substitutions by poliovirus replicase. J Mol Biol 207(1):175-182
-
(1989)
J Mol Biol
, vol.207
, Issue.1
, pp. 175-182
-
-
Kuge, S.1
Kawamura, N.2
Nomoto, A.3
-
36
-
-
0023488772
-
What organic compounds could have occurred on the prebiotic earth?
-
Miller S (1987) What organic compounds could have occurred on the prebiotic earth? Cold Spring Harbor Symp Quant Biol 52:17-27
-
(1987)
Cold Spring Harbor Symp Quant Biol
, vol.52
, pp. 17-27
-
-
Miller, S.1
-
37
-
-
0024046665
-
Cluster analysis of amino acid indices for prediction of protein structure and function
-
Nakai K, Kidera A, Kanehisa M (1988) Cluster analysis of amino acid indices for prediction of protein structure and function. Protein Eng 2:93-100
-
(1988)
Protein Eng
, vol.2
, pp. 93-100
-
-
Nakai, K.1
Kidera, A.2
Kanehisa, M.3
-
38
-
-
0024240385
-
Differential pattern of misreading induced by streptomycin in vitro
-
Negre D, Cenatiempo Y, Cozzone A (1988) Differential pattern of misreading induced by streptomycin in vitro. J Mol Biol 204:213-216
-
(1988)
J Mol Biol
, vol.204
, pp. 213-216
-
-
Negre, D.1
Cenatiempo, Y.2
Cozzone, A.3
-
39
-
-
0000053031
-
On the coding of genetic information
-
Nirenberg M, Jones O, Leder P, Clark B, Sly W, Pestka S (1963) On the coding of genetic information. Cold Spring Harbor Symp Quant Biol 28:549-558
-
(1963)
Cold Spring Harbor Symp Quant Biol
, vol.28
, pp. 549-558
-
-
Nirenberg, M.1
Jones, O.2
Leder, P.3
Clark, B.4
Sly, W.5
Pestka, S.6
-
40
-
-
0014674269
-
Nature of magnesium-induced miscoding: The in vitro synthesis of valine-tyrosine copolypeptide directed by poly-(U-G)
-
Nishimura S, Harada F, Hirabayashi M (1968) Nature of magnesium-induced miscoding: the in vitro synthesis of valine-tyrosine copolypeptide directed by poly-(U-G). J Mol Biol 40:173-186
-
(1968)
J Mol Biol
, vol.40
, pp. 173-186
-
-
Nishimura, S.1
Harada, F.2
Hirabayashi, M.3
-
41
-
-
0026574207
-
Recent evidence for evolution of the genetic code
-
Osawa S, Jukes T, Watanabe K, Muto A (1992) Recent evidence for evolution of the genetic code. Microbiol Rev 56(1):229-264
-
(1992)
Microbiol Rev
, vol.56
, Issue.1
, pp. 229-264
-
-
Osawa, S.1
Jukes, T.2
Watanabe, K.3
Muto, A.4
-
42
-
-
0024722501
-
Errors and alternatives in reading the universal genetic code
-
Parker J (1989) Errors and alternatives in reading the universal genetic code. Microbiol Rev 53(3):273-298
-
(1989)
Microbiol Rev
, vol.53
, Issue.3
, pp. 273-298
-
-
Parker, J.1
-
43
-
-
0029953930
-
The presence of codon-anticodon pairs in the acceptor stem of tRNAs
-
Rodin S, Rodin A, Ohno S (1996) The presence of codon-anticodon pairs in the acceptor stem of tRNAs. Proc Natl Acad Sci USA 93:4537-4542
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 4537-4542
-
-
Rodin, S.1
Rodin, A.2
Ohno, S.3
-
44
-
-
0024601947
-
Genetic code preferentially conserves long-range interactions among the amino acids
-
Sitaramam V (1989) Genetic code preferentially conserves long-range interactions among the amino acids. FEBS Lett 247(1):46-50
-
(1989)
FEBS Lett
, vol.247
, Issue.1
, pp. 46-50
-
-
Sitaramam, V.1
-
45
-
-
0024601947
-
Genetic code preferentially conserves long-range interactions among the amino acids
-
Sjöström M, Wold S (1985) Genetic code preferentially conserves long-range interactions among the amino acids. FEBS Lett 247(1): 46-50
-
(1985)
FEBS Lett
, vol.247
, Issue.1
, pp. 46-50
-
-
Sjöström, M.1
Wold, S.2
-
46
-
-
0002124567
-
Degeneracy of the genetic code: Extent, nature, and genetic implications
-
Bryson V, Vogel H (eds.). Academic Press, New York
-
Sonneborn T (1965) Degeneracy of the genetic code: extent, nature, and genetic implications. In: Bryson V, Vogel H (eds.) Evolving genes and proteins. Academic Press, New York, pp 377-397
-
(1965)
Evolving Genes and Proteins
, pp. 377-397
-
-
Sonneborn, T.1
-
47
-
-
0015935451
-
Analysis of specific misreading in Escherichia coli
-
Strigini P, Brickman E (1973) Analysis of specific misreading in Escherichia coli. J Mol Biol 75:659-672
-
(1973)
J Mol Biol
, vol.75
, pp. 659-672
-
-
Strigini, P.1
Brickman, E.2
-
48
-
-
0021317760
-
A unifying concept for the amino acid code
-
Swanson R (1984) A unifying concept for the amino acid code. Bull Math Biol 46(2):187-203
-
(1984)
Bull Math Biol
, vol.46
, Issue.2
, pp. 187-203
-
-
Swanson, R.1
-
49
-
-
0025908021
-
Codon swapping as a possible evolutionary mechanism
-
Szathmary E (1991) Codon swapping as a possible evolutionary mechanism. J Mol Evol 32:178-182
-
(1991)
J Mol Evol
, vol.32
, pp. 178-182
-
-
Szathmary, E.1
-
50
-
-
0026731915
-
A statistical test of hypotheses on the organization and origin of the genetic code
-
Szathmary E, Zintzaras E (1992) A statistical test of hypotheses on the organization and origin of the genetic code. J Mol Evol 35:185-189
-
(1992)
J Mol Evol
, vol.35
, pp. 185-189
-
-
Szathmary, E.1
Zintzaras, E.2
-
51
-
-
0024488958
-
The code within the codons
-
Taylor F, Coates D (1989) The code within the codons. BioSystems 22:177-187
-
(1989)
BioSystems
, vol.22
, pp. 177-187
-
-
Taylor, F.1
Coates, D.2
-
52
-
-
0028081516
-
Neural network model of the genetic code is strongly correlated to the GES scale of amino acid transfer free energies
-
Tolstrup N, Toftgård J, Engelbrecht J, Brunak S (1994) Neural network model of the genetic code is strongly correlated to the GES scale of amino acid transfer free energies. J Mol Biol 243:816-820
-
(1994)
J Mol Biol
, vol.243
, pp. 816-820
-
-
Tolstrup, N.1
Toftgård, J.2
Engelbrecht, J.3
Brunak, S.4
-
53
-
-
0029922443
-
Analysis of amino-acid indexes and mutation matrices for sequence comparison and structure prediction of proteins
-
Tomii K, Kanehisa M (1996) Analysis of amino-acid indexes and mutation matrices for sequence comparison and structure prediction of proteins. Protein Eng 9(1):27-36
-
(1996)
Protein Eng
, vol.9
, Issue.1
, pp. 27-36
-
-
Tomii, K.1
Kanehisa, M.2
-
54
-
-
0029938421
-
Thermodynamics of base pairing
-
Turner DH (1996) Thermodynamics of base pairing. Curr Opp Struct Biol 6(3):299-304
-
(1996)
Curr Opp Struct Biol
, vol.6
, Issue.3
, pp. 299-304
-
-
Turner, D.H.1
-
56
-
-
0013824051
-
On the evolution of the genetic code
-
Woese C (1965) On the evolution of the genetic code. Proc Natl Acad Sci USA 54:1546-1552
-
(1965)
Proc Natl Acad Sci USA
, vol.54
, pp. 1546-1552
-
-
Woese, C.1
-
57
-
-
0015910584
-
Evolution of the genetic code
-
Woese C (1973) Evolution of the genetic code. Naturwissenschaften 60:447-459
-
(1973)
Naturwissenschaften
, vol.60
, pp. 447-459
-
-
Woese, C.1
-
58
-
-
0013997503
-
On the fundamental nature and evolution of the genetic code
-
Woese C, Dugre D, Dugre S, Kondo M, Saxinger W (1966) On the fundamental nature and evolution of the genetic code. Cold Spring Harbor Symp Quant Biol 31:723-736
-
(1966)
Cold Spring Harbor Symp Quant Biol
, vol.31
, pp. 723-736
-
-
Woese, C.1
Dugre, D.2
Dugre, S.3
Kondo, M.4
Saxinger, W.5
-
59
-
-
0018582090
-
Water, protein folding and the genetic code
-
Wolfenden R, Cullis P, Southgate C (1979) Water, protein folding and the genetic code. Science 206(2):575-577
-
(1979)
Science
, vol.206
, Issue.2
, pp. 575-577
-
-
Wolfenden, R.1
Cullis, P.2
Southgate, C.3
-
60
-
-
0001155613
-
A co-evolution theory of the genetic code
-
Wong J (1975) A co-evolution theory of the genetic code. Proc Natl Acad Sci USA 72(5):1909-1912
-
(1975)
Proc Natl Acad Sci USA
, vol.72
, Issue.5
, pp. 1909-1912
-
-
Wong, J.1
-
61
-
-
0013592859
-
Role of minimization of chemical distances between amino acids in the evolution of the genetic code
-
Wong J (1980) Role of minimization of chemical distances between amino acids in the evolution of the genetic code. Proc Natl Acad Sci USA 77(2):1083-1086
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, Issue.2
, pp. 1083-1086
-
-
Wong, J.1
-
62
-
-
0028917227
-
A periodic table of symmetric tandem mismatches in RNA
-
Wu M, McDowell J, Turner DH (1995) A periodic table of symmetric tandem mismatches in RNA. Biochemistry 34(10):3204-3211
-
(1995)
Biochemistry
, vol.34
, Issue.10
, pp. 3204-3211
-
-
Wu, M.1
McDowell, J.2
Turner, D.H.3
|