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Volumn 48, Issue 2, 1998, Pages 403-410

Taxonomic significance of 2,4-diaminobutyric acid isomers in the cell wall peptidoglycan of actinomycetes and reclassification of Clavibacter toxicus as Rathayibacter toxicus comb. nov.

Author keywords

2,4 diaminobutyric acid isomers; Actinomycetes; Clavibacter toxicus; Peptidoglycan; Rathayibacter toxicus comb. nov.

Indexed keywords

2,4 DIAMINOBUTYRIC ACID; MENAQUINONE; PEPTIDOGLYCAN; RIBOSOME DNA;

EID: 0031776717     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-48-2-403     Document Type: Article
Times cited : (82)

References (35)
  • 1
    • 0026729711 scopus 로고
    • Chemotaxonomic differentiation of coryneform bacteria isolated from biofilters
    • Bendinger, B., Kroppenstedt, R. M., Klatte, S. & Altendorf, K. (1992). Chemotaxonomic differentiation of coryneform bacteria isolated from biofilters. Int J Syst Bacteriol 42, 474-486.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 474-486
    • Bendinger, B.1    Kroppenstedt, R.M.2    Klatte, S.3    Altendorf, K.4
  • 2
    • 0019985079 scopus 로고
    • Lipid composition of Agromyces ramosus (Gledhill and Casida)
    • Collins, M. D. (1982). Lipid composition of Agromyces ramosus (Gledhill and Casida). FEMS Microbiol Lett 14, 187-189.
    • (1982) FEMS Microbiol Lett , vol.14 , pp. 187-189
    • Collins, M.D.1
  • 3
    • 0020534765 scopus 로고
    • Cell wall peptidoglycan and lipid composition of the phytopathogen Corynebacterium rathayi (Smith)
    • Collins, M. D. (1983). Cell wall peptidoglycan and lipid composition of the phytopathogen Corynebacterium rathayi (Smith). Syst Appl Microbiol 4, 193-198.
    • (1983) Syst Appl Microbiol , vol.4 , pp. 193-198
    • Collins, M.D.1
  • 4
    • 0019306204 scopus 로고
    • Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid
    • Collins, M. D. & Jones, D. (1980). Lipids in the classification and identification of coryneform bacteria containing peptidoglycans based on 2,4-diaminobutyric acid. J Appl Bacteriol 48, 459-470.
    • (1980) J Appl Bacteriol , vol.48 , pp. 459-470
    • Collins, M.D.1    Jones, D.2
  • 5
    • 0021255515 scopus 로고
    • Clavibacter: A new genus containing some phytopathogenic coryneform bacteria, including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., pathogens that cause ratoon stunting disease of sugarcane and Bermudagrass stunting disease
    • Davis, M. J., Gillaspie, A. G., Jr, Vidaver, A. K. & Harris, R. W. (1984). Clavibacter: a new genus containing some phytopathogenic coryneform bacteria, including Clavibacter xyli subsp. xyli sp. nov., subsp. nov. and Clavibacter xyli subsp. cynodontis subsp. nov., pathogens that cause ratoon stunting disease of sugarcane and Bermudagrass stunting disease. Int J Syst Bacteriol 34, 107-117.
    • (1984) Int J Syst Bacteriol , vol.34 , pp. 107-117
    • Davis, M.J.1    Gillaspie Jr., A.G.2    Vidaver, A.K.3    Harris, R.W.4
  • 6
    • 0020312533 scopus 로고
    • Nucleic acid hybridization studies on Microbacterium, Curtobacterium, Agromyces and related taxa
    • Döpfer, H., Stackebrandt, E. & Fiedler, F. (1982). Nucleic acid hybridization studies on Microbacterium, Curtobacterium, Agromyces and related taxa. J Gen Microbiol 128, 1697-1708.
    • (1982) J Gen Microbiol , vol.128 , pp. 1697-1708
    • Döpfer, H.1    Stackebrandt, E.2    Fiedler, F.3
  • 7
    • 0023654629 scopus 로고
    • Separation of amino acid enantiomers and chiral amines using precolumn derivatization with (+)-1-(9-fluorenyl)ethyl chloroformate and reversed-phase liquid chromatography
    • Einarsson, S. & Josefsson, B. (1987). Separation of amino acid enantiomers and chiral amines using precolumn derivatization with (+)-1-(9-fluorenyl)ethyl chloroformate and reversed-phase liquid chromatography. Anal Chem 59, 1191-1195.
    • (1987) Anal Chem , vol.59 , pp. 1191-1195
    • Einarsson, S.1    Josefsson, B.2
  • 8
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 9
    • 17644433612 scopus 로고
    • Die Aminosäuresequenz von 2,4-diaminobuttersäure enthaltenden mureinen bei verschiedenen coryneformen bakterien und Agromyces ramosus
    • Fiedler, F. & Kandler O. (1973). Die Aminosäuresequenz von 2,4-diaminobuttersäure enthaltenden mureinen bei verschiedenen coryneformen bakterien und Agromyces ramosus. Arch Mikrobiol 89, 51-66.
    • (1973) Arch Mikrobiol , vol.89 , pp. 51-66
    • Fiedler, F.1    Kandler, O.2
  • 11
    • 0014468859 scopus 로고
    • Predominant catalase-negative soil bacteria
    • Gledhill, W. E. & Casida, L. E., Jr (1969). Predominant catalase-negative soil bacteria. Appl Microbiol 17, 208-213.
    • (1969) Appl Microbiol , vol.17 , pp. 208-213
    • Gledhill, W.E.1    Casida Jr., L.E.2
  • 12
    • 0030045573 scopus 로고    scopus 로고
    • Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall
    • Groth, I., Schumann, P., Weiss, N., Martin, K. & Rainey, F. A. (1996). Agrococcus jenensis gen. nov., sp. nov., a new genus of actinomycetes with diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 234-239.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 234-239
    • Groth, I.1    Schumann, P.2    Weiss, N.3    Martin, K.4    Rainey, F.A.5
  • 13
    • 0027518911 scopus 로고
    • A method for identifying the carboxy terminal amino acid of protein
    • Hayashi, T. & Sasagawa, T. (1993). A method for identifying the carboxy terminal amino acid of protein. Anal Biochem 209, 163-168.
    • (1993) Anal Biochem , vol.209 , pp. 163-168
    • Hayashi, T.1    Sasagawa, T.2
  • 14
    • 0021241188 scopus 로고
    • Three new murein types in coryneform bacteria isolated from activated sludge
    • Hensel, R. (1984). Three new murein types in coryneform bacteria isolated from activated sludge. Syst Appl Microbiol 5, 11-19.
    • (1984) Syst Appl Microbiol , vol.5 , pp. 11-19
    • Hensel, R.1
  • 15
    • 0017047316 scopus 로고
    • Taxonomic study on obligately psychrophilic bacteria isolated from Antarctica
    • Inoue, K. & Komagata, K. (1976). Taxonomic study on obligately psychrophilic bacteria isolated from Antarctica. J Gen Microbiol 22, 165-176.
    • (1976) J Gen Microbiol , vol.22 , pp. 165-176
    • Inoue, K.1    Komagata, K.2
  • 16
    • 77956800518 scopus 로고
    • Lipid and cell wall analysis in bacterial systematics
    • Komagata, K. & Suzuki, K. (1987). Lipid and cell wall analysis in bacterial systematics. Methods Microbiol 19, 161-208.
    • (1987) Methods Microbiol , vol.19 , pp. 161-208
    • Komagata, K.1    Suzuki, K.2
  • 17
    • 0001589301 scopus 로고
    • The bacterial flora of distilled and stored water. III. New species of the genera Corynebacterium, Flavobacterium, Spirillum and Pseudomonas
    • Leifson, E. (1962). The bacterial flora of distilled and stored water. III. New species of the genera Corynebacterium, Flavobacterium, Spirillum and Pseudomonas. Int Bull Bacteriol Nomencl Taxon 12, 161-170.
    • (1962) Int Bull Bacteriol Nomencl Taxon , vol.12 , pp. 161-170
    • Leifson, E.1
  • 18
    • 0005209727 scopus 로고
    • Über biochemische Dehydrierungen in der Cortingruppe
    • Mamoli, L. (1939). Über biochemische Dehydrierungen in der Cortingruppe. Ber Dtsch Chem Ges 72, 1863-1865.
    • (1939) Ber Dtsch Chem Ges , vol.72 , pp. 1863-1865
    • Mamoli, L.1
  • 19
    • 0026802563 scopus 로고
    • Determination of diaminopimelic acid in biological materials using high-performance liquid chromatography
    • Puchala, R., Pior, H., Kulasek, G. W. & Shelford, J. A. (1992). Determination of diaminopimelic acid in biological materials using high-performance liquid chromatography. J Chromatogr 623, 63-67.
    • (1992) J Chromatogr , vol.623 , pp. 63-67
    • Puchala, R.1    Pior, H.2    Kulasek, G.W.3    Shelford, J.A.4
  • 20
    • 0028241122 scopus 로고
    • Further evidence for the phylogenetic coherence of actinomycetes with group B-peptidoglycan and evidence for the phylogenetic intermixing of the genera Microbacterium and Aureobacterium as determined by 16S rDNA analysis
    • Rainey, F., Weiss, N., Prauser, H. & Stackebrandt, E. (1994). Further evidence for the phylogenetic coherence of actinomycetes with group B-peptidoglycan and evidence for the phylogenetic intermixing of the genera Microbacterium and Aureobacterium as determined by 16S rDNA analysis. FEMS Microbiol Lett 118, 135-140.
    • (1994) FEMS Microbiol Lett , vol.118 , pp. 135-140
    • Rainey, F.1    Weiss, N.2    Prauser, H.3    Stackebrandt, E.4
  • 21
    • 0026571526 scopus 로고
    • Clavibacter toxicus sp. nov., the bacterium responsible for annual ryegrass toxicity in Australia
    • Riley, I. T. & Ophel, K. M. (1992). Clavibacter toxicus sp. nov., the bacterium responsible for annual ryegrass toxicity in Australia. Int J Syst Bacteriol 42, 64-68.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 64-68
    • Riley, I.T.1    Ophel, K.M.2
  • 22
    • 50549178319 scopus 로고
    • Preparation of transforming deoxyribonucleic acid by phenol treatment
    • Saito, H. & Miura, K. (1963). Preparation of transforming deoxyribonucleic acid by phenol treatment. Biochim Biophys Acta 72, 619-629.
    • (1963) Biochim Biophys Acta , vol.72 , pp. 619-629
    • Saito, H.1    Miura, K.2
  • 23
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 24
    • 0015462556 scopus 로고
    • Peptidoglycan type of bacterial cell walls and their taxonomic implications
    • Schleifer, K. H. & Kandler, O. (1972). Peptidoglycan type of bacterial cell walls and their taxonomic implications. Bacteriol Rev 36, 407-477.
    • (1972) Bacteriol Rev , vol.36 , pp. 407-477
    • Schleifer, K.H.1    Kandler, O.2
  • 25
    • 0030071653 scopus 로고    scopus 로고
    • Agromyces mediolanus sp. nov., nom. rev., comb, nov., a species for 'Corynebacterium mediolanum' Mamoli 1939 and for some aniline-assimilating bacteria which contain 2,4-diaminobutyric acid in the cell wall peptidoglycan
    • Suzuki, K., Sasaki, J., Uramoto, M., Nakase, T. & Komagata, K. (1996). Agromyces mediolanus sp. nov., nom. rev., comb, nov., a species for 'Corynebacterium mediolanum' Mamoli 1939 and for some aniline-assimilating bacteria which contain 2,4-diaminobutyric acid in the cell wall peptidoglycan. Int J Syst Bacteriol 46, 88-93.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 88-93
    • Suzuki, K.1    Sasaki, J.2    Uramoto, M.3    Nakase, T.4    Komagata, K.5
  • 26
    • 0030892019 scopus 로고    scopus 로고
    • Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate 'Curtobacterium psychrophilum' Inoue and Komagata 1976
    • Suzuki, K., Sasaki, J., Uramoto, M., Nakase, T. & Komagata, K. (1997). Cryobacterium psychrophilum gen. nov., sp. nov., nom. rev., comb. nov., an obligately psychrophilic actinomycete to accommodate 'Curtobacterium psychrophilum' Inoue and Komagata 1976. Int J Syst Bacteriol 47, 474-478.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 474-478
    • Suzuki, K.1    Sasaki, J.2    Uramoto, M.3    Nakase, T.4    Komagata, K.5
  • 27
    • 0024957222 scopus 로고
    • Optical resolution of 2,6-diaminopimelic acid stereoisomers by high performance liquid chromatography for the chemotaxonomy of actinomycete strains
    • Takahashi, Y., Iwai, Y., Tomoda, H., Nimura, N., Kinoshita, T. & Omura, S. (1989). Optical resolution of 2,6-diaminopimelic acid stereoisomers by high performance liquid chromatography for the chemotaxonomy of actinomycete strains. J Gen Appl Microbiol 35, 27-32.
    • (1989) J Gen Appl Microbiol , vol.35 , pp. 27-32
    • Takahashi, Y.1    Iwai, Y.2    Tomoda, H.3    Nimura, N.4    Kinoshita, T.5    Omura, S.6
  • 28
    • 0029846981 scopus 로고    scopus 로고
    • Leucobacter komagatae gen. nov., sp. nov., a new aerobic Gram-positive, nonsporulating rod with 2,4-diaminobutyric acid in the cell wall
    • Takeuchi, M., Weiss, N., Schumann, P. & Yokota, A. (1996). Leucobacter komagatae gen. nov., sp. nov., a new aerobic Gram-positive, nonsporulating rod with 2,4-diaminobutyric acid in the cell wall. Int J Syst Bacteriol 46, 967-971.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 967-971
    • Takeuchi, M.1    Weiss, N.2    Schumann, P.3    Yokota, A.4
  • 29
    • 0021715576 scopus 로고
    • Determination of DNA base composition by reversed-phase high-performance liquid chromatography
    • Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
    • (1984) FEMS Microbiol Lett , vol.25 , pp. 125-128
    • Tamaoka, J.1    Komagata, K.2
  • 30
    • 0027968068 scopus 로고
    • CLUSTAL w: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL w: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 31
    • 0018715615 scopus 로고
    • Rapid differentiation of Streptomyces from Nocardia by liquid chromatography
    • Tisdall, P. A. & Anhalt, J. P. (1979). Rapid differentiation of Streptomyces from Nocardia by liquid chromatography. J Clin Microbiol 10, 503-505.
    • (1979) J Clin Microbiol , vol.10 , pp. 503-505
    • Tisdall, P.A.1    Anhalt, J.P.2
  • 32
    • 85008131305 scopus 로고
    • Taxonomic studies on coryneform bacteria IV. Morphological, cultural, biochemical and physiological characteristics
    • Yamada, K. & Komagata, K. (1972a). Taxonomic studies on coryneform bacteria IV. Morphological, cultural, biochemical and physiological characteristics. J Gen Appl Microbiol 18, 399-416.
    • (1972) J Gen Appl Microbiol , vol.18 , pp. 399-416
    • Yamada, K.1    Komagata, K.2
  • 33
    • 85008068633 scopus 로고
    • Taxonomic studies on coryneform bacteria V. Classification of Coryneform bacteria
    • Yamada, K. & Komagata, K. (1972b). Taxonomic studies on coryneform bacteria V. Classification of Coryneform bacteria. J Gen Appl Microbiol 18, 417-431.
    • (1972) J Gen Appl Microbiol , vol.18 , pp. 417-431
    • Yamada, K.1    Komagata, K.2
  • 34
    • 0026744466 scopus 로고
    • Emended description of the genus Agromyces and description of Agromyces cerinus subsp. cerinus sp. nov., subsp. nov., Agromyces cerinus subsp. nitratus sp. nov., subsp. nov., Agromyces fucosus subsp. fucosus sp. nov., subsp. nov., Agromyces fucosus subsp. hippuratus sp. nov., subsp. nov
    • Zgurskaya, H. I., Evtushenko, L. I., Akimov, V. N., Voyevoda, H. V., Dobrovolskaya, T. G., Lysak, L. V. & Kalakoutskii, L. V. (1992). Emended description of the genus Agromyces and description of Agromyces cerinus subsp. cerinus sp. nov., subsp. nov., Agromyces cerinus subsp. nitratus sp. nov., subsp. nov., Agromyces fucosus subsp. fucosus sp. nov., subsp. nov., Agromyces fucosus subsp. hippuratus sp. nov., subsp. nov. Int J Syst Bacteriol 42, 635-641.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 635-641
    • Zgurskaya, H.I.1    Evtushenko, L.I.2    Akimov, V.N.3    Voyevoda, H.V.4    Dobrovolskaya, T.G.5    Lysak, L.V.6    Kalakoutskii, L.V.7
  • 35
    • 0027510307 scopus 로고
    • Rathayibacter gen. nov., including the species Rathayibacter rathayi comb, nov., Rathayibacter tritici comb, nov., Rathayibacter iranicus comb, nov., and six strains from annual grasses
    • Zgurskaya, H. I., Evtushenko, L. I., Akimov, V. N. & Kalakoutskii, L. V. (1993). Rathayibacter gen. nov., including the species Rathayibacter rathayi comb, nov., Rathayibacter tritici comb, nov., Rathayibacter iranicus comb, nov., and six strains from annual grasses. Int J Syst Bacteriol 43, 143-149.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 143-149
    • Zgurskaya, H.I.1    Evtushenko, L.I.2    Akimov, V.N.3    Kalakoutskii, L.V.4


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