Desulfobulbus rhabdoformis sp. nov., a sulfate reducer from a water-oil separation system

International Journal of Systematic Bacteriology

Volumn 48, Issue 2, 1998, Pages 469-474

  Lien, Torleiv ^a   Madsen, Marit ^a   Steen, Ida H ^a   Gjerdevik, Kjersti ^a  

^a UNIVERSITY OF BERGEN   (Norway)

Author keywords

16S rRNA gene sequence; Desulfobulbus rhabdoformis sp. nov.; Oilfield; Sulfate reducer

Indexed keywords

CYTOCHROME B; CYTOCHROME C; FUMARIC ACID; HYDROGEN; HYDROGENASE; MALIC ACID; MENAQUINONE; OIL; PROPIONIC ACID; RIBOSOME DNA; RIBOSOME RNA; SULFATE; WATER;

ARTICLE; BACTERIAL GROWTH; CONTROLLED STUDY; ENZYME ACTIVITY; GRAM NEGATIVE BACTERIUM; NONHUMAN; PRIORITY JOURNAL; SULFATE REDUCING BACTERIUM;

BACTERIA (MICROORGANISMS); DESULFOBULBUS ELONGATUS; DESULFOBULBUS PROPIONICUS; DESULFOBULBUS RHABDOFORMIS; NEGIBACTERIA; PROKARYOTA;

EID: 0031776059     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-48-2-469     Document Type: Article

References (30)

1. Barth, T. & Riise, M. (1992). Interactions between organic anions in formation waters and reservoir mineral phases. Org Geochem 19, 455-482.
2. Beji, A., Izard, D., Gavini, F., Leclerc, H., Leseine-Delstanche, M. & Krembel, J. (1987). A rapid chemical procedure for isolation and purification of chromosomal DNA from Gram-negative bacilli. Anal Biochem 162, 18-23.
3. Christensen, B., Torsvik, T. & Lien, T. (1992). Immunomagnetically captured thermophilic sulfate-reducing bacteria from North Sea oil field waters. Appl Environ Microbiol 58, 1244-1248.
4. Collins, M. D. & Widdel, F. (1986). Respiratory quinones of sulfate-reducing and sulfur-reducing bacteria: a systematic investigation. Syst Appl Microbiol 8, 8-18.
5. Cord-Ruwisch, R. (1985). A quick method for the determination of dissolved an precipitated sulfides in cultures of sulfate-reducing bacteria. J Microbiol Methods 5, 83-91.
6. De Ley, J. (1970). Reexamination of the association between melting point, bouant density, and chemical base composition of deoxyribonucleic acid. J Bacteriol 54, 738-754.
7. De Soete, G. (1983). A least squares algorithm for fitting additive trees to proximity data. Psychometrika 48, 621-626.
8. Devereux, R. & Mundfrom, G. W. (1994). A phylogenetic tree of 16S rRNA sequences from sulfate-reducing bacteria in a sandy marine sediment. Appl Environ Microbiol 60, 3437-3439.
9. Harmsen, H. J., Akkermans, A. D. L., Stams, A. J. M. & de Vos, W. M. (1996). Population dynamics of propionate-oxidizing bacteria under methanogenic and sulfidogenic conditions in anaerobic granular sludge. Appl Environ Microbiol 62, 2163-2168.
10. Isaksen, M. F. & Teske, A. (1996). Desulforhopalus vaculatus gen. nov., sp. nov., a new moderately psychrophilic sulfate-reducing bacterium with gas vacuoles isolated from a temperate estuary. Arch Microbiol 166, 160-168.
11. Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, pp 21-132. Edited by H. N. Munro. New York: Academic Press.
12. Laemmli, U. K. (1970). Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680-685.
13. Lee, J., Yi, C., LeGall, J. & Peck, H. D. (1973). Isolation of a new pigment, desulforubidin, from Desulfovibrio desulfuricans (Norway strain) and its role in sulfite reduction. J Bacteriol 115, 453-455.
14. Lien, T. & Beeder, J. (1997). Desulfobacter vibrioformis sp. nov., a sulfate reducer from a water-oil separation system. Int J Syst Bacteriol 47, 1124-1128.
15. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G +C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
16. Møretrø, T. & Lien, T. Unpublished.
17. Rainey, F. A. & Stackebrandt, E. (1993). 16S rDNA analysis reveals phylogenetic diversity among the polysaccharolytic clostridia. FEMS Microbiol Lett 113, 125-128.
18. Rainey, F. A., Dorsch, M., Morgan, H. W. & Stackebrandt, E. (1992). 16S rDNA analysis of Spirochaeta thermophilia: position and implications for the systematic of the order Spirochaetales. Syst Appl Microbiol 16, 224-226.
19. Samain, E., Dubourguier, H. C. & Albagnac, G. (1984). Isolation and characterization of Desulfobulbus elongatus sp. nov. from a mesophilic industrial digester. Syst Appl Microbiol 5, 391-401.
20. Silhavy, T. J., Berman, M. L. & Enquist, L W. (1984). Procedure 40. Phenol/chloroform extraction of DNA samples. In Experiments with Gene Fusions, pp 177-179. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
21. Smith, L. (1978). Bacterial cytochromes and their spectral characterization. Methods Enzymol 53, 202-212.
22. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
23. Stams, A. J. M., Kremer, D. R., Weenk, G. H. & Hansen, T. A. (1984). Pathway of propionate formation in Desulfobulbus propionicus. Arch Microbiol 139, 167-173.
24. Vance, I. & Brink, D. E. (1994). Propionate-driven sulfate-reduction by oil-field bacteria in a pressurized porous rock bioreactor. Appl Microbiol Biotechnol 40, 920-925.
25. Voordouw, G., Armstrong, S. M., Reimer, M. F., Fouts, B., Telang, A. J., Shen, Y. & Gevertz, D. (1996). Characterization of 16S rRNA genes from oil field microbial communities indicates the presence of a variety of sulfate-reducing, fermentative, and sulfide-oxidizing bacteria. Appl Environ Microbiol 62, 1623-1629.
26. Weston, J. A. & Knowles, C. J. (1973). A soluble co-binding c-type cytochrome from the marine bacterium Beneckea natriegens. Biochim Biophys Acta 305, 11-18.
27. Widdel, F. & Bak, F. (1992). Gram-negative mesophilic sulfate-reducing bacteria. In The Prokaryotes, 2nd edn, pp. 3352-3378. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K. H. Schleifer. Berlin: Springer.
28. Widdel, F. & Pfennig, N. (1981). Studies of dissimilatory sulfate-reducing bacteria that decompose fatty acids. I. Isolation of sulfate-reducing bacteria enriched with acetate from saline environments. Description of Desulfobacter postgatei gen. nov. and sp. nov. Arch Microbiol 129, 395-400.
29. Widdel, F. & Pfennig, N. (1982). Studies on dissimilatory sulfate-reducing bacteria that decompose fatty acids. II. Incomplete oxidation of propionate by Desulfobulbus propionicus gen. nov., sp. nov. Arch Microbiol 131, 360-365.
30. Widdel, F., Kohring, G. W. & Mayer, F. (1983). Studies of dissimilatory sulfate-reducing bacteria that decompose fatty acids. III. Characterization of the filamentous gliding Desulfonema limicola gen. nov. and sp. nov. and Desulfonema magnum sp. nov. Arch Microbiol 129, 286-294.