-
1
-
-
0009578188
-
Refinement of the spatial structure of the gramicidin A transmembrane ion-channel
-
Arseniev, A. S., I. L. Barsukov, A. L. Lomize, V. Y. Orekhov, and V. F. Bystrov. 1992. Refinement of the spatial structure of the gramicidin A transmembrane ion-channel. (Russian), Biol. Membr. (USSR). 18:182.
-
(1992)
Russian, Biol. Membr. (USSR)
, vol.18
, pp. 182
-
-
Arseniev, A.S.1
Barsukov, I.L.2
Lomize, A.L.3
Orekhov, V.Y.4
Bystrov, V.F.5
-
2
-
-
0025721931
-
Amino acid sequence modulation of gramicidin channel function: Effects of tryptophan-to-phenylalanine substitutions on the single-channel conductance and curation
-
Becker, M. D., D. V. Greathouse, R. E. Koeppe II, and O. S. Andersen. 1991. Amino acid sequence modulation of gramicidin channel function: effects of tryptophan-to-phenylalanine substitutions on the single-channel conductance and curation. Biochemistry. 30:8830-8839.
-
(1991)
Biochemistry
, vol.30
, pp. 8830-8839
-
-
Becker, M.D.1
Greathouse, D.V.2
Koeppe R.E. II3
Andersen, O.S.4
-
3
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein, F. C., T. F. Koetzle, G. J. Williams, E. F. Meyer, M. D. Brice, J. B. Rogers, O. Kennard, T. Shimanouchi, and M. Tasuni. 1977. The Protein Data Bank: a computer-based archival file for macromolecular structures. J. Mol. Biol. 112:535-542.
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.3
Meyer, E.F.4
Brice, M.D.5
Rogers, J.B.6
Kennard, O.7
Shimanouchi, T.8
Tasuni, M.9
-
4
-
-
0028859424
-
1H nuclear magnetic resonance study of the conformation of gramicidin A in lipid bilayers
-
1H nuclear magnetic resonance study of the conformation of gramicidin A in lipid bilayers. Biophys. J. 69:1933-1938.
-
(1995)
Biophys. J.
, vol.69
, pp. 1933-1938
-
-
Bouchard, M.1
Davis, J.H.2
Auger, M.3
-
5
-
-
0026597444
-
Free R value: A novel statistical quantity for assessing the accuracy of crystal structures
-
Brunger, A. T. 1992. Free R value: a novel statistical quantity for assessing the accuracy of crystal structures. Nature. 355:472-474.
-
(1992)
Nature
, vol.355
, pp. 472-474
-
-
Brunger, A.T.1
-
6
-
-
0015967881
-
Conformational parameters for amino acids in helical, β-sheet, and random coil regions calculated from proteins
-
Chou, P. Y., and G. D. Fasman. 1974. Conformational parameters for amino acids in helical, β-sheet, and random coil regions calculated from proteins. Biochemistry. 13:211. Prediction of protein conformation, ibid., p. 222.
-
(1974)
Biochemistry
, vol.13
, pp. 211
-
-
Chou, P.Y.1
Fasman, G.D.2
-
7
-
-
0015987426
-
Prediction of protein conformation
-
Chou, P. Y., and G. D. Fasman. 1974. Conformational parameters for amino acids in helical, β-sheet, and random coil regions calculated from proteins. Biochemistry. 13:211. Prediction of protein conformation, ibid., p. 222.
-
Biochemistry
, pp. 222
-
-
-
8
-
-
0028338441
-
Structural clues to prion replication
-
Cohen F. E., K. M. Pan, Z. Huang, M. Baldwin, R. J. Fletterick, and S. B. Prusiner. 1994. Structural clues to prion replication. Science. 264: 530-531.
-
(1994)
Science
, vol.264
, pp. 530-531
-
-
Cohen, F.E.1
Pan, K.M.2
Huang, Z.3
Baldwin, M.4
Fletterick, R.J.5
Prusiner, S.B.6
-
9
-
-
0030748570
-
Protein stability and conformational rearrangements in lipid bilayers: Linear gramicidin, a model system
-
Cotten, M., Feng Xu, and T. A. Cross. 1997. Protein stability and conformational rearrangements in lipid bilayers: linear gramicidin, a model system. Biophys. J. 73:614-623.
-
(1997)
Biophys. J.
, vol.73
, pp. 614-623
-
-
Cotten, M.1
Xu, F.2
Cross, T.A.3
-
12
-
-
0031567125
-
Crystal structure of the gramicidin/ potassium thiocyanate complex
-
Doyle, D. A., and B. A. Wallace. 1997. Crystal structure of the gramicidin/ potassium thiocyanate complex. J. Mol. Biol. 266:963-977.
-
(1997)
J. Mol. Biol.
, vol.266
, pp. 963-977
-
-
Doyle, D.A.1
Wallace, B.A.2
-
13
-
-
85025377717
-
Studies on a bactericidal agent extracted from a soil bacillus
-
Dubos, R. J. 1939. Studies on a bactericidal agent extracted from a soil bacillus. J. Exp. Med. 70:1-10.
-
(1939)
J. Exp. Med.
, vol.70
, pp. 1-10
-
-
Dubos, R.J.1
-
14
-
-
0344169196
-
Structural information from functional measurements. Single channel studies of gramicidin analogs
-
Durkin, J. T., O. S. Anderson, E. R. Blout, F. Heitz, R. E. Koeppe, and Y. Trudelle. 1986. Structural information from functional measurements. Single channel studies of gramicidin analogs. Biophys. J. 49:118-121.
-
(1986)
Biophys. J.
, vol.49
, pp. 118-121
-
-
Durkin, J.T.1
Anderson, O.S.2
Blout, E.R.3
Heitz, F.4
Koeppe, R.E.5
Trudelle, Y.6
-
15
-
-
0001168290
-
Gramicidin. IX. Preparation of gramicidin A, B, and C
-
Gross, E., and B. Witkop. 1965. Gramicidin. IX. Preparation of gramicidin A, B, and C. Biochemistry. 4:2495-2501.
-
(1965)
Biochemistry
, vol.4
, pp. 2495-2501
-
-
Gross, E.1
Witkop, B.2
-
16
-
-
85050047808
-
Gramicidin, tyrocidine, and tyrothricin
-
Hotchkiss, R. D. 1944. Gramicidin, tyrocidine, and tyrothricin. Adv. Enzymol. 4:153-199.
-
(1944)
Adv. Enzymol.
, vol.4
, pp. 153-199
-
-
Hotchkiss, R.D.1
-
18
-
-
0027360175
-
High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR
-
Ketchem, R. R., W. Hu, and T. A. Cross. 1993. High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR. Science. 261:1457-1460.
-
(1993)
Science
, vol.261
, pp. 1457-1460
-
-
Ketchem, R.R.1
Hu, W.2
Cross, T.A.3
-
19
-
-
0030589514
-
Phi/psi-chology: Ramachandran revisited
-
Kleigwegt, G. J., and T. A. Jones. 1996. Phi/psi-chology: Ramachandran revisited. Structure. 4:1395.
-
(1996)
Structure
, vol.4
, pp. 1395
-
-
Kleigwegt, G.J.1
Jones, T.A.2
-
20
-
-
0009578187
-
[L-Leu 9-D-Trp 10-L-Leu 11-D-Trp 12-L-Leu 13-D-Trp 14-L-Leu 15]-gramicidin forms both single- And double-helical channels
-
Abstr.
-
Koeppe II, R. E., D. V. Greathouse, L. L. Providence, and O. S. Anderson. 1991. [L-Leu 9-D-Trp 10-L-Leu 11-D-Trp 12-L-Leu 13-D-Trp 14-L-Leu 15]-gramicidin forms both single-and double-helical channels. Biophys. J. 59:319a. (Abstr.).
-
(1991)
Biophys. J.
, vol.59
-
-
Koeppe R.E. II1
Greathouse, D.V.2
Providence, L.L.3
Anderson, O.S.4
-
21
-
-
0021854185
-
Gramicidin K, a new linear channel-forming gramicidin from Bacillus brevis
-
Koeppe II, R. E., J. A. Paczkowski, and W. L. Whaley. 1985. Gramicidin K, a new linear channel-forming gramicidin from Bacillus brevis. Biochemistry. 24:2822-2826.
-
(1985)
Biochemistry
, vol.24
, pp. 2822-2826
-
-
Koeppe R.E. II1
Paczkowski, J.A.2
Whaley, W.L.3
-
22
-
-
0029080673
-
Palmitoylation-induced conformational changes of specific side chains in the gramicidin transmembrane channel
-
Koeppe II, R. E., J. A. Killian, T. C. Vogt, B. de Kruijff, M. J. Taylor, G. L. Mattice, and D. V. Greathouse. 1995. Palmitoylation-induced conformational changes of specific side chains in the gramicidin transmembrane channel. Biochemistry. 34:9299-9306.
-
(1995)
Biochemistry
, vol.34
, pp. 9299-9306
-
-
Koeppe R.E. II1
Killian, J.A.2
Vogt, T.C.3
De Kruijff, B.4
Taylor, M.J.5
Mattice, G.L.6
Greathouse, D.V.7
-
23
-
-
0026502808
-
On the helix sense of gramicidin a single channels
-
Koeppe II, R. E., L. L. Providence, D. V. Greathouse, F. Heitz, Y. Trudelle, N. Purdie, and O. D. Andersen. 1992. On the helix sense of gramicidin A single channels. Proteins Struct., Funct., Genet. 12:49-62.
-
(1992)
Proteins Struct., Funct., Genet.
, vol.12
, pp. 49-62
-
-
Koeppe R.E. II1
Providence, L.L.2
Greathouse, D.V.3
Heitz, F.4
Trudelle, Y.5
Purdie, N.6
Andersen, O.D.7
-
24
-
-
0024281641
-
Three-dimensional structure at 0.86 Å of the uncompleted form of the transmembrane ion channel peptide gramicidin A
-
Langs, D. A. 1988. Three-dimensional structure at 0.86 Å of the uncompleted form of the transmembrane ion channel peptide gramicidin A. Science. 241:188-191.
-
(1988)
Science
, vol.241
, pp. 188-191
-
-
Langs, D.A.1
-
26
-
-
0015114095
-
Folding of polypeptide chains in proteins: A proposed mechanism for folding
-
Lewis, P. N., F. A. Momany, and H. S. Scheraga. 1971. Folding of polypeptide chains in proteins: a proposed mechanism for folding. Proc. Natl. Acad. Sci. USA. 68:2293.
-
(1971)
Proc. Natl. Acad. Sci. USA
, vol.68
, pp. 2293
-
-
Lewis, P.N.1
Momany, F.A.2
Scheraga, H.S.3
-
27
-
-
0001423787
-
Nonribosomal polypeptide synthesis on polyenzyme templates
-
Lipmann, F. 1973. Nonribosomal polypeptide synthesis on polyenzyme templates. Acc. Chem. Res. 6:361-367.
-
(1973)
Acc. Chem. Res.
, vol.6
, pp. 361-367
-
-
Lipmann, F.1
-
28
-
-
0029142573
-
The features of the spatial structure of the gramicidin A-cesium complex
-
Nekrasov, A. N., A. V. Stepanov, and V. P. Timofeev. 1995. The features of the spatial structure of the gramicidin A-cesium complex. FEBS Lett. 371:35-38.
-
(1995)
FEBS Lett.
, vol.371
, pp. 35-38
-
-
Nekrasov, A.N.1
Stepanov, A.V.2
Timofeev, V.P.3
-
29
-
-
0025667349
-
Kinetics of gramicidin channel formation in lipid bilayers: Transmembrane monomer association
-
O'Connell, A. M., R. E. Koeppe II, and O. S. Andersen. 1990. Kinetics of gramicidin channel formation in lipid bilayers: transmembrane monomer association. Science. 250:1256-1259.
-
(1990)
Science
, vol.250
, pp. 1256-1259
-
-
O'Connell, A.M.1
Koeppe R.E. II2
Andersen, O.S.3
-
31
-
-
0027666089
-
High-resolution structure and dynamic implications for a double-helical gramicidin A conformer
-
Pascal, S. M., and T. A. Cross. 1993. High-resolution structure and dynamic implications for a double-helical gramicidin A conformer. J. Biomol. NMR. 3:495-513.
-
(1993)
J. Biomol. NMR
, vol.3
, pp. 495-513
-
-
Pascal, S.M.1
Cross, T.A.2
-
32
-
-
0013780285
-
Induced active transport of ions in mitochondria
-
Pressman, B. C. 1965. Induced active transport of ions in mitochondria. Proc. Natl. Acad. Sci. USA. 53:1076-1083.
-
(1965)
Proc. Natl. Acad. Sci. USA
, vol.53
, pp. 1076-1083
-
-
Pressman, B.C.1
-
33
-
-
0028918454
-
Ion transport in the gramicidin channel: Molecular dynamics study of single and double occupancy
-
Roux, B., B. Prod'hom, and M. Karplus. 1995. Ion transport in the gramicidin channel: molecular dynamics study of single and double occupancy. Biophys. J. 68:876-892.
-
(1995)
Biophys. J.
, vol.68
, pp. 876-892
-
-
Roux, B.1
Prod'hom, B.2
Karplus, M.3
-
35
-
-
0000082544
-
CHAIN - A crystallographic modeling program
-
Sack, J. S. 1988. CHAIN - A crystallographic modeling program. J. Mol. Graphics. 6:224-225.
-
(1988)
J. Mol. Graphics
, vol.6
, pp. 224-225
-
-
Sack, J.S.1
-
36
-
-
0028916495
-
HPLC demonstration that an all Trp→Phe replacement in gramicidin A results in a conformational rearrangement from β-helical monomer to double-stranded dimer in model membranes
-
Salom, D., M. C. Bañò, L. Braco, and C. Abad. 1995. HPLC demonstration that an all Trp→Phe replacement in gramicidin A results in a conformational rearrangement from β-helical monomer to double-stranded dimer in model membranes. Biochem. Biophys. Res. Commun. 209: 466-473.
-
(1995)
Biochem. Biophys. Res. Commun.
, vol.209
, pp. 466-473
-
-
Salom, D.1
Bañò, M.C.2
Braco, L.3
Abad, C.4
-
37
-
-
33947482744
-
The structure of valine and isoleucine-gramicidin A
-
Sarges, R., and B. Witkop. 1965. The structure of valine and isoleucine-gramicidin A. J. Am. Chem. Soc. 87:2011-2020.
-
(1965)
J. Am. Chem. Soc.
, vol.87
, pp. 2011-2020
-
-
Sarges, R.1
Witkop, B.2
-
38
-
-
0024339942
-
Induction of conductance heterogeneity in gramicidin channels
-
Sawyer, D. B., R. E. Koeppe II, and O. S. Andersen. 1989. Induction of conductance heterogeneity in gramicidin channels. Biochemistry. 28: 6571-6583.
-
(1989)
Biochemistry
, vol.28
, pp. 6571-6583
-
-
Sawyer, D.B.1
Koeppe R.E. II2
Andersen, O.S.3
-
39
-
-
0029053366
-
Gramicidin tryptophans mediate formamidinium-induced channel stabilization
-
Seoh, S.-A., and D. Busath. 1995. Gramicidin tryptophans mediate formamidinium-induced channel stabilization. Biophys. J. 68:2271-2279.
-
(1995)
Biophys. J.
, vol.68
, pp. 2271-2279
-
-
Seoh, S.-A.1
Busath, D.2
-
40
-
-
0028100894
-
Sodium ion binding in the gramicidin A channel. Solid-state NMR studies of the tryptophan residues
-
Separovic, F., J. Gehrmann, T. Milne, B. A. Cornell, S. Y. Lin, and R. Smith. 1994. Sodium ion binding in the gramicidin A channel. Solid-state NMR studies of the tryptophan residues. Biophys. J. 67:1495-1500.
-
(1994)
Biophys. J.
, vol.67
, pp. 1495-1500
-
-
Separovic, F.1
Gehrmann, J.2
Milne, T.3
Cornell, B.A.4
Lin, S.Y.5
Smith, R.6
-
43
-
-
0022648044
-
Temperature-jump and voltage-jump experiments at planar lipid membranes support an aggregational (micellar) model of the gramicidin A ion channel
-
Stark, G., M. Strässle, and Z. Takacz. 1986. Temperature-jump and voltage-jump experiments at planar lipid membranes support an aggregational (micellar) model of the gramicidin A ion channel. J. Membr. Biol. 89:23-37.
-
(1986)
J. Membr. Biol.
, vol.89
, pp. 23-37
-
-
Stark, G.1
Strässle, M.2
Takacz, Z.3
-
44
-
-
0025103378
-
Environments and conformations of tryptophan side chains of gramicidin A in phospholipid bilayers studied by Raman spectroscopy
-
Takeuchi, H., Y. Nemoto, and I. Harada. 1990. Environments and conformations of tryptophan side chains of gramicidin A in phospholipid bilayers studied by Raman spectroscopy. Biochemistry. 29:1572-1579.
-
(1990)
Biochemistry
, vol.29
, pp. 1572-1579
-
-
Takeuchi, H.1
Nemoto, Y.2
Harada, I.3
-
46
-
-
0020023482
-
Location of monovalent cation binding sites in gramicidin channel
-
Urry, D. W., K. U. Prasad, and T. L. Trapane. 1982a. Location of monovalent cation binding sites in gramicidin channel. Proc. Natl. Acad. Sci. USA. 79:390-394.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 390-394
-
-
Urry, D.W.1
Prasad, K.U.2
Trapane, T.L.3
-
47
-
-
0020465420
-
14 analogs of gramicidin A, the helix sense of the channel and location of ion binding sites
-
14 analogs of gramicidin A, the helix sense of the channel and location of ion binding sites. J. Membr. Biol. 69: 225-231.
-
(1982)
J. Membr. Biol.
, vol.69
, pp. 225-231
-
-
Urry, D.W.1
Walker, J.T.2
Trapane, T.L.3
-
48
-
-
0017389386
-
The dimeric nature of the gramicidin A transmembrane channel: Conductance and fluorescence energy transfer studies of hybrid channels
-
Veatch, W., and L. Stryer. 1977. The dimeric nature of the gramicidin A transmembrane channel: conductance and fluorescence energy transfer studies of hybrid channels. J. Mol. Biol. 113:89-192.
-
(1977)
J. Mol. Biol.
, vol.113
, pp. 89-192
-
-
Veatch, W.1
Stryer, L.2
-
49
-
-
0024281633
-
The gramicidin pore: Crystal structure of a cesium complex
-
Wallace, B. A., and K. Ravikumar. 1988. The gramicidin pore: crystal structure of a cesium complex. Science. 241:182-187.
-
(1988)
Science
, vol.241
, pp. 182-187
-
-
Wallace, B.A.1
Ravikumar, K.2
-
50
-
-
0030995981
-
The binding site of sodium in the gramicidin A channel: Comparison of molecular dynamics with solid-state NMR data
-
Woolf, T. B., and B. Roux. 1997. The binding site of sodium in the gramicidin A channel: comparison of molecular dynamics with solid-state NMR data. Biophys. J. 72:1930-1945.
-
(1997)
Biophys. J.
, vol.72
, pp. 1930-1945
-
-
Woolf, T.B.1
Roux, B.2
-
51
-
-
0026738754
-
A conformational rearrangement in gramicidin A: From a double-stranded left-handed to a single-stranded right-handed helix
-
Zhang, Z., S. M. Pascal, and T. A. Cross. 1992. A conformational rearrangement in gramicidin A: from a double-stranded left-handed to a single-stranded right-handed helix. Biochemistry. 31:8822-8828.
-
(1992)
Biochemistry
, vol.31
, pp. 8822-8828
-
-
Zhang, Z.1
Pascal, S.M.2
Cross, T.A.3
|