Shewanella putrefaciens mtrB encodes an outer membrane protein required for Fe(III) and Mn(IV) reduction

Journal of Bacteriology

Volumn 180, Issue 23, 1998, Pages 6292-6297

  Beliaev, Alexander S ^a   Saffarini, Daad A ^a,b  

^a UNIVERSITY OF MASSACHUSETTS   (United States)

^b UNIVERSITY OF WISCONSIN MILWAUKEE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

IRON; MANGANESE; OUTER MEMBRANE PROTEIN;

AMINO ACID SEQUENCE; ANAEROBIC METABOLISM; ARTICLE; BACTERIAL METABOLISM; CELL MEMBRANE TRANSPORT; ELECTRON TRANSPORT; IRON METABOLISM; METAL METABOLISM; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN DETERMINATION; PROTEIN SYNTHESIS; SHEWANELLA PUTREFACIENS;

ANIMALIA; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; PROKARYOTA; PSEUDOMONAS; SHEWANELLA PUTREFACIENS;

EID: 0031754775     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/.180.23.6292-6297.1998     Document Type: Article

References (44)

1. Altschul, S., W. Gish, W. Miller, E. Myers, and D. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
2. Altschul, S., T. Madden, A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
3. Arnold, R. G., T. J. DiChristina, and M. R. Huffman. 1986. Inhibitor studies of dissimilative Fe(III) reduction by Pseudomonas sp. strain 200 ("Pseudomonas ferrireductans"). Appl. Environ. Microbiol. 52:281-289.
4. Arnold, R., T. DiChristina, and M. Hoffman. 1988. Reductive dissolution of Fe(III) oxides by Pseudomonas sp. 200. Biotechnol. Bioeng. 32:1081-1096.
5. Burnes, B., M. Mulberry, and T. DiChristina. 1998. Design and application of two rapid screening techniques for isolation of Mn(IV) reduction-deficient mutants of Shewanella putrefaciens. Appl. Environ. Microbiol. 64:2716-2720.
6. Calder, K. M., and M. A. Horwitz. 1998. Identification of iron-regulated proteins of Mycobacterium tuberculosis and cloning of tandem genes encoding a low iron-induced protein and a metal transporting ATPase with similarities to two-component metal transport systems. Microb. Pathog. 24:133-143.
7. Canfield, D. E., B. Thamdrup, and J. W, Hansen. 1993. The anaerobic degradation of organic matter in Danish coastal sediments: iron reduction, manganese reduction and sulfate reduction. Geochim. Cosmochim. Acta 57:3867-3885.
8. Carter, P. 1971. Spectrophotometric determination of serum iron at the submicrogram level with a new reagent (ferrozine). Anal. Biochem. 40:450-458.
9. Crocquet-Valdes, P., K. Weiss, and D. Walker. 1994. Sequence analysis of the 190-kDa antigen-encoding gene of Rickettsia conorii (Malish 7 strain). Gene 140:115-119.
10. Cull, M., and C. McHenry. 1990. Preparation of extracts from prokaryotes, p. 147-153. In M. P. Deutscher (ed.), Guide to protein purification, vol. 182. Academic Press, San Diego, Calif.
11. Daniels, L., R. S. Hanson, and J. A. Phillips. 1994. Methods for general and molecular bacteriology. American Society for Microbiology, Washington, D.C.
12. 3+. J. Bacteriol. 176:1468-1474.
13. Heilmann, C., M. Hussain, G. Peters, and F. Gotz. 1997. Evidence for autolysin-mediated primary attachment of Staphylococcus epidermidis to a polystyrene surface. Mol. Microbiol. 24:1013-1024.
14. Hussain, H., J. Grove, L. Griffiths, S. Busby, and J. Cole. 1994. A seven-gene operon essential for formate-dependent nitrite reduction to ammonia by enteric bacteria. Mol. Microbiol. 12:153-163.
15. Keen, N. T., S. Tamaki, D. Kobayashi, and D. Trolliger. 1988. Improved broad-host-range plasmids for DNA cloning in gram-negative bacteria. Gene 70:191-197.
16. Leisman, G. B., J. Waukau, and S. A. Forst. 1995. Characterization and environmental regulation of outer membrane proteins in Xenorhabdus nematophilus. Appl. Environ. Microbiol. 61:200-204.
17. Lovley, D. 1991. Dissimilatory Fe (III) and Mn (IV) reduction. Microbiol. Rev. 55:259-287.
18. Lovley, D., and E, Phillips. 1988. Novel mode of microbial energy metabolism: organic carbon oxidation coupled to dissimilatory reuction of iron or manganese. Appl. Environ. Microbiol. 51:683-689.
19. Lovley, D., M. Baedecker, D. Lonergan, I. Cozzarelli, E. Phillips, and D. Siegel. 1989. Oxidation of aromatic contaminants coupled to microbial iron reduction. Nature 339:297-299.
20. Lovley, D., J. Coates, D. Saffarini, and D. Lonergan. 1997. Dissimilatory iron reduction, p. 187-215. In G. Winkelmann and C. Carrano (ed.), Transition metals in microbial metabolism. Harwood Academic Publishers, Amsterdam, The Netherlands.
21. Lovley, D. R., and D. J. Lonergan. 1990. Anaerobic oxidation of toluene, phenol, and p-cresol by the dissimilatory iron-reducing organism, GS-15. Appl. Environ. Microbiol. 56:1858-1864.
22. Lund, K., and J. DeMoss. 1976. Association-dissociation behavior and subunit structure of heat-released nitrate reductase from Escherichia coli. J. Biol. Chem. 251:2207-2216.
23. Lundrigan, M. D., and R. J. Kadner. 1986. Nucleotide sequence of the gene for the ferrienterochelin receptor FepA in Escherichia coli. Homology among outer membrane receptors that interact with TonB. J. Biol. Chem. 261:10797-10801.
24. Moser, D., and K. Nealson. 1996. Growth of the facultative anaerobe Shewanella putrefaciens by elemental sulfur reduction. Appl. Environ. Microbiol. 62:2100-2105.
25. Myers, C., and J. Myers. 1993. Ferric reductase is associated with the membranes of anaerobically grown Shewanella putrefaciens MR-1. FEMS Microbiol. Lett. 108:15-22.
26. Myers, C., and J. Myers. 1992. Localization of cytochromes to the outer membrane of anaerobically grown Shewanella putrefaciens MR-1. J. Bacteriol. 174:3429-3438.
27. Myers, C., and J. Myers. 1997. Outer membrane cytochromes of Shewanella putrefaciens MR-1: spectral analysis, and purification of the 83-kDa c-type cytochrome. Biochim. Biophys. Acta 1326:307-318.
28. Myers, C., and K. Nealson. 1988. Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptor. Science 240:1319-1321.
29. Myers, J., and C. Myers. 1998. Isolation and sequence of omcA, a gene encoding a decaheme outer membrane cytochrome c of Shewanella putrefaciens MR-1, and detection of omcA homologs in other strains of S. putrefaciens. Biochim. Biophys. Acta 1373:237-251.
30. Nakai, K., and M. Kanehisa. 1991. Expert system for predicting protein localization sites in gram-negative bacteria. Proteins Struct. Funct. Genet. 11:95-110.
31. Nealson, K., R. Rosson, and C. Myers. 1989. Mechanisms of oxidation and reduction of manganese, p. 383-411. In T. Beveridge and R. Doyle (ed.), Metal ions and bacteria. John Wiley and Sons, Inc., New York, N.Y.
32. Nealson, K. H., C. R. Myers, and B. Wimpee. 1991. Isolation and identification of manganese reducing bacteria, and estimates of microbial manganese reducing potential in the Black Sea. Deep-Sea Res. 38:S907-S920.
33. Nealson, K., and D. Saffarini. 1994. Iron and manganese in anaerobic respiration: environmental significance, physiology, and regulation. Annu. Rev. Microbiol. 48:311-343.
34. Negm, R., and T. Pistole. 1998. OmpC of Salmonella typhimurium mediates adherence to macrophages. GenBank submission AF039309.
35. Nielson, H., J. Engelbrecht, S. Brunak, and G. von Heijne. 1997. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10:1-6.
36. Obuekwe, C., and D. Westlake. 1982. Effects of medium composition on cell pigmentation, cytochrome content and ferric iron reduction in a Pseudomonas sp. isolated from crude oil. Can. J. Microbiol. 28:989-992.
37. Obuekwe, C., D. Westlake, J. Plambeck, and F. Cook. 1981. Corrosion of mild steel in cultures of ferric iron reducing bacteria isolated from crude oil. II. Mechanism of anodic depolarization. Corrosion (Houston) 37:632-637.
38. Pollock, W. B., M. Loutfi, M. Bruschi, B. J. Rapp-Giles, J. D. Wall, and G. Voordouw. 1991. Cloning, sequencing, and expression of the gene encoding the high-molecular-weight cytochrome c from Desulfovibrio vulgaris Hildenborough. J. Bacteriol. 173:220-228.
39. Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
40. Sanger, F., S. Nicklen, and A. R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74:5463-5467.
41. Semple, K., and D. Westlake. 1987. Characterization of iron-reducing Alteromonas putrefaciens strains from oil field fluids. Can. J. Microbiol. 33:366-371.
42. Simon, R., U. Priefer, and A. Puhler. 1983. A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Bio/Technology 1:784-791.
43. Theberge, S. M., and G. W. Luther III. 1997. Determination of the electro-chemical properties of a soluble aqueous FeS species present in sulfidic solutions. Aquat. Geochem. 3:191-211.
44. Yu, J., and J. B. Kaper. 1992. Cloning and characterization of the eae gene of enterohaemorrhagic Escherichia coli O157:H7. Mol. Microbiol. 6:411-417.