Pelistega europaea gen. nov., sp. nov., a bacterium associated with respiratory disease in pigeons: Taxonomic structure and phylogenetic allocation

International Journal of Systematic Bacteriology

Volumn 48, Issue 2, 1998, Pages 431-440

  Vandamme, P ^a   Segers, P ^a   Ryll, M ^b   Hommez, J ^c   Vancanneyt, M ^a   Coopman, R ^a   De Baere, R ^d   Van De Peer, Y ^d   Kersters, K ^a   De Wachter, R ^d   Hinz, K H ^b  

^a GHENT UNIVERSITY   (Belgium)

^b UNIVERSITY OF VETERINARY MEDICINE HANNOVER   (Germany)

^c Provinciaal Verbond V D   (Belgium)

^d NONE

Author keywords

Pelistega europaea; Pigeon; Taxonomic structure

Indexed keywords

BACTERIAL DNA; CYTOSINE; GUANINE; RIBOSOME DNA;

ARTICLE; DNA DNA HYBRIDIZATION; GENOTYPE; GRAM NEGATIVE BACTERIUM; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PHYLOGENY; PIGEON; PRIORITY JOURNAL; RESPIRATORY TRACT INFECTION; TAXONOMY;

BACTERIA (MICROORGANISMS); COLUMBA; NEGIBACTERIA; PELISTEGA EUROPAEA; PROKARYOTA; PROTEOBACTERIA; TAYLORELLA EQUIGENITALIS;

EID: 0031744639     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-48-2-431     Document Type: Article

References (32)

1. Andreasen, J. R. & Sandhu, T. (1993). Pasteurella anatipestifer-like bacteria associated with respiratory disease in pigeons. Avian Dis 37, 908-911.
2. Birnboim, H. C. & Doly, J. (1979). A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7, 1513-1523.
3. Cowan, S. T. (1974). Cowan and Steel's Manual for the Identification of Medical Bacteria, 2nd edn. Cambridge: Cambridge University Press.
4. De Ley, J. (1970). Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid. J Bacteriol 101, 738-754.
5. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
6. Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
7. Frazier, W. C. (1926). A method for the detection of changes in gelatin due to bacteria. J Infect Dis 39, 302-309.
8. Holton, T. A. & Graham, M. W. (1991). A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors. Nucleic Acids Res 19, 1156.
9. Hugh, R. & Leifson, E. (1953). The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram-negative bacteria. J Bacteriol 66, 24-26.
10. Jukes, T. H. & Cantor, C. R. (1969). Evolution of protein molecules. In Mammalian Protein Metabolism, vol. 3, pp. 21-132. Edited by H. N. Munro. New York: Academic Press.
11. Kaffka, A. (1957). Erfahrungen mit einfachen Untersuchungsmethoden zum Nachweis von Hyaluronidase, Fibrolysin und Phosphatase bei Staphylokokken. Zentralbl Bakteriol Parasitenkd Infektionskr Hyg Abt I Orig Reihe A 178, 381-385.
12. Kersters, K. & De Ley, J. (1971). Enzymatic tests with resting cells and cell-free extracts. Methods Microbiol 5A, 33-52.
13. Kersters, K., Hinz, K.-H., Hertle, A., Segers, P., Lievens, A., Siegmann, O. & De Ley, J. (1984). Bordetella avium sp. nov., isolated from the respiratory tracts of turkeys and other birds. Int J Syst Bacteriol 34, 56-70.
14. Kilian, M. (1976). A taxonomic study of the genus Haemophilus. J Gen Microbiol 93, 9-62.
15. Lautrop, H. (1960). Laboratory diagnosis of whooping cough or Bordetella infections. Bull WHO 23, 15-31.
16. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
17. Møller, V. (1955). Simplified tests for some amino acid decarboxylases and for the arginine dihydrolase system. Acta Pathol Microbiol Scand 36, 158-172.
18. Möller, O. (1951). A new method for staining bacterial capsules. Acta Pathol Microbiol Scand 28, 127-131.
19. Pickett, M. J. (1980). Nonfermentative Gram Negative Bacilli. A Syllabus for Detection and Identification. Los Angeles: Scientific Development.
20. Pot, B., Vandamme, P. & Kersters, K. (1994). Analysis of electrophoretic whole-organism protein fingerprints. In Modern Microbial Methods. Chemical Methods in Prokaryotic Systematics, pp. 493-521. Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley.
21. Smith, R. F. & Willet, N. P. (1968). Rapid plate method for screening hyaluronidase and chondroitin sulfatase-producing microorganisms. Appl Microbiol 16, 1434-1436.
22. Sugimoto, C., Isayama, Y., Sakazaki, R. & Kuramochi, S. (1983). Transfer of Haemophilus equigenitalis Taylor et al. 1978 to the genus Taylorella gen. nov. as Taylorella equigenitalis comb. nov. Curr Microbiol 9, 155-162.
23. Ursing, J. B., Rossello-Mora, R. A., Garcia-Valdes, E. & Lalucat, J. (1995). Taxonomic note: a pragmatic approach to the nomenclature of phenotypically similar genomic groups. Int J Syst Bacteriol 45, 604.
24. Vandamme, P., Pot, B., Gillis, M., De Vos, P., Kersters, K. & Swings, J. (1996). Polyphasic taxonomy, a consensus approach to bacterial classification. Microbiol Rev 60, 407-438.
25. Vandamme, P., Vancanneyt, M., Pot, B. & 10 other authors (1992). Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens. Int J Syst Bacteriol 42, 344-356.
26. Van de Peer, Y. & De Wachter, R. (1994). TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Appl Biosci 10, 569-570.
27. Van de Peer, Y., Jansen, J., De Rijk, P. & De Wachter, R. (1997). Database on the structure of small ribosomal subunit RNA sequences. Nucleic Acids Res 25, 111-116.
28. Van de Peer, Y., Neefs, J.-M., De Rijk, P., De Vos, P. & De Wachter, R. (1994). About the order of divergence of the main bacterial taxa during evolution. Syst Appl Microbiol 17, 32-38.
29. Walc-Pokrzywnicki, Z. (1973). Flagella staining. Zentralbl Bakteriol Parasitenkd Infektionskr Hyg Abt 1 Orig Reihe A 223, 240-243.
30. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
31. Wilmotte, A., Van der Auwera, G. & De Wachter, R. (1993). Structure of the 16S ribosomal RNA of the thermophilic cyanobacterium Chlorogloeopsis HTF ('Mastigocladus laminosus HTF') strain PCC7518, and phylogenetic analysis. FEBS Lett 317, 96-100.
32. Woese, C. R., Kandler, O. & Wheelis, M. L. (1990). Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. Proc Natl Acad Sci USA 87, 4576-4579.