Microsatellite loci identified in the seagrass Posidonia oceanica (L.) Delile

Journal of Heredity

Volumn 89, Issue 6, 1998, Pages 562-568

  Procaccini, G ^a   Waycott, M ^b,c  

^a STAZIONE ZOOLOGICA ANTON DOHRN   (Italy)

^b UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^c JAMES COOK UNIVERSITY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

MICROSATELLITE DNA; PLANT DNA;

ANGIOSPERM; ARTICLE; BENTHOS; CONTROLLED STUDY; DNA POLYMORPHISM; GENE LOCUS; GENETIC VARIABILITY; GENOTYPE; GRASS; NONHUMAN; POPULATION GENETICS; PRIORITY JOURNAL;

EMBRYOPHYTA; HALOPHILA; MAGNOLIOPHYTA; POSIDONIA OCEANICA;

EID: 0031742465     PISSN: 00221503     EISSN: None     Source Type: Journal    
DOI: 10.1093/jhered/89.6.562     Document Type: Article

References (59)

1. Akkaya MS, Bhagwat AA, and Cregan PB, 1992. Length polymorphisms of simple sequence repeat DNA in soybean. Genetics 132:1131-1139.
2. Alberte RS, Suba GK, Procaccini G, Zimmerman RC, and Fain SR, 1994. Assessment of genetic diversity of seagrass populations using DNA fingerprinting: implications for population stability and management. Proc Natl Acad Sci USA 91:1049-1053.
3. Avise JC, 1994. Molecular markers, natural history and evolution. New York: Chapman & Hall.
4. Bellan-Santini D, Lacaze JC, and Poizet C, 1994. Les biocénoses marines et littorales de Méditerranée, synthèse, menaces et perspectives. Paris: Musée National d' Histoire Naturelle.
5. Boudouresque J-F and Jeudy de Grissac A, 1983. L' herbier à Posidonia oceanica en Méditerranée: les interactions entre la plante et la sédiment. J Rech Océanogr 8:99-122.
6. Bowcock AM, Ruizlinares A, Tomfohrde J, Minch E, Kidd JR, and Cavalli-Sforza LL, 1994 High resolution of human evolutionary trees with polymorphic microsatellites. Nature 368:455-457.
7. Buia MC and Mazzella L, 1991. Reproductive phenology of the Mediterranean seagrasses Posidonia oceanica (L) Delile, Cymodocea nodosa (Ucria) Aschers., and Zostera noltii Hornem. Aquat Bot 40:343-362.
8. Byrne M, Marquez-Garcia MI, Uren T, Smith DS, and Moran GF, 1996. Conservation and genetic diversity of microsatellite loci in the genus Eucalyptus. Aust J Bot 44:331-341.
9. Caye G and Meinesz A, 1984. Observations sur la floraison et la fructification de Posidonia oceanica dans la Baie de Villefranche et en Corse du Sud In: International Workshop on Posidonia oceanica Beds (Boudouresque C-F, Jeudy de Grissac A, Olivier J, eds). Marseille: GIS Posidonie, 1:193-201.
10. Chase M, Kesseli R, and Bawa K, 1996. Microsatellite markers for populations and conservation genetics of tropical trees. Am J Bot 83:51-57.
11. Cox PA, 1993. Water pollinated plants. Sci Am 269:68-74.
12. Cox PA and Knox RB, 1988. Pollination postulates and two-dimensional pollination in hydrophilous Monocotyledons. Ann Missouri Bot Garden 75:811-818.
13. Craighead L, Paetkau D, Reynolds HV, Vyse ER, and Strobeck C, 1995. Microsatellite analysis of paternity and reproduction in Arctic grizzly bears. J Hered 86: 255-261.
14. Crawford DJ, Stuessy TF, Cosner MB, Haines DW, Wiens D, and Penaillo P, 1994. Lacions fernandeziana (Lactoridaceae) on the Juan-Fernandez-Islands: allozyme uniformity and field observations. Conserv Biol 8:277-280.
15. den Hartog C. 1970. The sea-grasses of the world. Amsterdam: North-Holland.
16. Dib C, Fauré S, Fizames C, Samson D, Drouot N, Vignal A, Millasseau P, Marc S, Hazan J, Seboun E, Lathrop M, Gyapay G, Morissette G, and Weissenbach J, 1996. A comprehensive genetic map of the human genome based on 5264 microsatellites. Nature 380:152-154.
17. Dietrich W, Katz H, Lincoln SE, Shin H-S, Friedman J, Dracopoli NC, and Lander ES, 1992. A genetic map of the mouse suitable for typing intraspecific crosses. Genetics 131:423-447.
18. Estoup A, Scholl A, Pouvreau A, and Solignac M, 1995. Monoandry and polyandry in bumble bees (Hymenoptera; Bombinae) as evidenced by highly variable microsatellites. Mol Ecol 4:89-93.
19. Forbes SH, Hogg JT, Buchanan FC, Crawford AM, and Allendorf FW, 1995. Microsatellite evolution in congeneric mammals: domestic and bighorn sheep. Mol Biol Evol 12:1106-1113.
20. Gerloff U, Schlotterer C, Rassmann K, Rambold I, Hohmann G, Fruth B, and Tautz D, 1995. Amplification of hypervariable simple sequence repeats (microsatellites) from excremental DNA of wild living bonobos (Pan paniscus). Mol Ecol 4:515-518.
21. Huber W and Leuchtmann A, 1992. Genetic differentiation of the Erigeron species (Asteraceae) in the Alps: a case study of unusual allozymic uniformity. Plant Syst Evol 183:1-16.
22. Kellogg KA, Jeffrey AM, Stauffer JR Jr, and Kocher TD, 1995. Microsatellite variation demonstrates multiple paternity in lekking cichlid fishes from Lake Malawi, Africa. Proc R Soc Lond B 260:79-84.
23. Kuo J, James SH, Kirkman H, and Den Hartog C, 1990. Chromosome numbers and their systematic implications in Australian marine angiosperms: the Posidoniaceae. Plant Syst Evol 171:199-204.
24. Lagercrantz U, Ellegren H and Andersson L, 1993. The abundance of various polymorphic microsatellite motils differs between plants and vertebrates. Nucleic Acids Res 21:1111-1115.
25. Les DH, 1988. Breeding systems, population structure and evolution in hydrophylous angiosperms. Ann Missouri Bot Garden 75:819-835.
26. Mashburn SJ, Sharits RR, and Smith MH, 1978. Genetic variation among Typha populations of the south eastern United States. Evolution 32:681-685.
27. Morgante M and Oliveri AM, 1993. PCR amplified microsatellites as markers in plant genetics. Plant J 3:175-182.
28. Morin PA, Wallis J, Moore JJ, and Woodruff DS, 1994. Paternity exclusion in a community of wild chimpanzees using hypervariable simple sequence repeats. Mol Ecol 3:469-478.
29. Paetkau D, Calvert W, Stirling I, and Strobeck C, 1995. Microsatellite analysis of population structure in Canadian polar bears. Mol Ecol 4:347-354.
30. Paetkau D and Strobeck C, 1994. Microsatellite analysis of genetic variation in black bear populations. Mol Ecol 3:489-495.
31. Peakall R, Smouse PE, and Huff DR, 1995. Evolutionary implications of allozyme and RAPD variation in diploid populations of dioecious buffalograss Buchloë dactyloides. Mol Ecol 4:135-147.
32. Pettit J, Ducker S, and Knox B, 1981. Submarine pollination. Sci Am 244:92-100.
33. Powell W, Morgante M, Andre C, McNicol JW, Machray GC, Doyle JJ, Tingey SV, and Rafalski JA, 1995a. Hypervariable microsatellites provide a general source of polymorphic DNA markers for the chloroplast genome. Curr Biol 5:1023-1029.
34. Powell W, Morgante M, McDevitt R, Vendramin GG, and Rafalski JA, 1995b. Polymorphic simple sequence repeat regions in chloroplast genome. Applications to the populations genetics of pines. Proc Natl Acad Sci USA 92:7759-7763.
35. Primmer CR, Moller AP, and Ellegren H, 1995. Resolving genetic relationships with microsatellite markers: a parentage testing system for the swallow Hirundo rustica. Mol Ecol 4:493-498.
36. Procaccini G, Alberte RS, and Mazzella L, 1996. Genetic structure of the Seagrass Posidonia oceanica (L) Delile in the western Mediterranean: ecological implications. Mar Ecol Progr Ser 140:153-160.
37. Procaccini G and Mazzella L, 1996. Genetic variability and reproduction in two Mediterranean seagrasses. In: Seagrass biology: proceedings of an international workshop. Rottnest Island, Western Australia, January 25-29, 1996; 85-92.
38. Queller DC, Strassman JE, and Hughes CR, 1993. Microsatellites and kinship. Trends Ecol Evol 8:285-288.
39. Rafalski JA and Tingey SV, 1993. Genetic diagnostics in plant breeding: RAPDs, microsatellites and machines. Trends Genet 9:275-280.
40. Richards AJ 1986. Plant breeding systems. London: Allen & Unwin.
41. Roy MS, Geffen E, Smith D, Ostrander EA, and Wayne RK, 1994. Patterns of differentiation and hybridization in North American wolflike canids, revealed by analysis of microsatellite loci. Mol Biol Evol 11:553-570.
42. Ruckelshaus MH, 1995. Estimates of outcrossing rates and of inbreeding depression in a population of the marine angiosperm Zostera marina. Mar Biol 123:583-593.
43. Saghai Maroof MA, Biyashev RM, Yang GP, Zhang Q, and Allard RW, 1994. Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 91:5466-5470.
44. Sambrook J, Fritsch EF, and Maniatis T, 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
45. Schlötterer C, Amos B, and Tautz D, 1991. Conservation of polymorphic simple sequence loci in cetacean species. Nature 354:63-65.
46. Scribner KT, Arntzen JW, and Burke T, 1994. Comparative analysis of intra-and interpopulation genetic diversity in Bufo bufo, using allozyme, single-locus microsatellite, minisatellite, and multilocus minisatellite data. Mol Biol Evol 11:737-748.
47. Tautz D, 1989. Hypervariability of simple sequences as a general source of polymorphic DNA markers. Nucleic Acids Res 17:6463-6471.
48. Taylor AC, Sherwin WB, and Wayne RK, 1995. Genetic variation of microsatellite loci in a bottlenecked species: the northern hairy-nosed wombat Lasiorhinus krefftii. Mol Ecol 3:277-290.
49. Thelin I and Boudouresque J-F, 1985. Posidonia oceanica flowering and fruiting: recent data from an international inquiry. Posidonia Newsl 1:5-14.
50. Thomas MA and Scott NS, 1993. Microsatellite repeats in grapevine reveal DNA polymorphisms when analyzed as sequence-tagged sites (STSs). Theor Appl Genet 86:985-990.
51. Waycott M, 1995. Assessment of genetic variation and clonality in the seagrass Posidonia australis using RAPD and allozyme analysis. Mar Ecol Prog Ser 116:289-295.
52. Waycott M and Sampson J, 1997. The mating system of an hydrophilous angiosperm, Posidonia australis. Am J Bot 84:621-625.
53. Waycott M, James SH, and Walker DI, in press. Genetic variation within and between populations of Posidonia australis, a hydrophilous, clonal seagrass. Heredity.
54. Waycott M and Les DH, 1996. An integrated approach to the evolutionary study of seagrasses. In: Seagrass biology: proceedings of an international workshop, Rottnest Island, Western Australia, January 25-29, 1996; 71-78.
55. Waycott M, Walker DI, and James SH, 1996. Genetic uniformity in Amphibolis antartica, a dioecious seagrass. Heredity 76:578-585.
56. Weber JL and May PE, 1989. Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396.
57. Wolff SL and Jeffries RL, 1987. Morphological and isozyme variation in Salicornia europaea (s.l.) (Chenopodiaceae) in northeastern North America. Can J Bot 65: 1410-1419.
58. Wu KS and Tanksley SD, 1993. Abundance, polymorphism and genetic mapping of microsatellites in rice. Mol Gen Genet 241:225-235.
59. Yang GP, Shagai Marool MA, Xu Qifa Zhang CG, and Biyashev RM, 1994. Comparative analysis of microsatellite DNA polymorphism in landtraces and cultivars of rice. Mol Gen Genet 245:187-194.