Characterisation of bacterial and algal pigments and breakdown products by HPLC in mixed freshwater planktonic populations

Archiv fur Hydrobiologie

Volumn 143, Issue 4, 1998, Pages 409-434

  Le Bris, S ^b   Plante Cuny, M R ^b   Vacelet, E ^a  

^a STATION MARINE D ENDOUME   (France)

^b NONE

Author keywords

[No Author keywords available]

Indexed keywords

ALGA; BACTERIOPLANKTON; LIQUID CHROMATOGRAPHY; PIGMENT;

EID: 0031734853     PISSN: 00039136     EISSN: None     Source Type: Journal    
DOI: 10.1127/archiv-hydrobiol/143/1998/409     Document Type: Article

References (65)

1. ABELLA, C., MONTESINOS, E. & GUERRERO, R. (1980): Field studies on the competition between purple and green sulfur bacteria for available light. - In: DUKOLIL, M., METZ, H. & JEWSON, D. (eds.): Shallow lakes. Contributions to their limnology. - Dr. W. Junk BV Publishers, The Hague, pp. 173-181.
2. BORREGO, C. M. & GARCIA-GIL, L. J. (1994): Separation of bacteriochlorophyll homologs from green photosynthetic sulfur bacteria by reversed-phase HPLC. - Photosynth. Res. 41: 157-164.
3. BROTAS, V. & PLANTE-CUNY, M. R. (1996): Identification et quantification des pigments chlorophylliens et carotenoïdes des sédiments marins: un protocole d'analyse par HPLC. - Oceanol. Acta 19: 623-634.
4. BUFFAN-DUBAU, E., DE WIT, R. & CASTEL, J. (1996): Feeding selectivity of the harpacticoid copepod Canuella perplexa in benthic muddy environments demonstrated by HPLC analyses of chlorin and carotenoid pigments. - Mar. Ecol. Progr. Ser. 137: 71-82.
5. CALDWELL, D. E. & TIEDJE, J. M. (1975): The structure of anaerobic bacterial communities in the hypolimnia of several Michigan lakes. - Can. J. Microbiol. 21: 377-385.
6. CAPLE, M. B., CHOW, H.-C. & STROUSE, C. E. (1978): Photosynthetic pigments of green sulfur bacteria: the esterifying alcohols of bacteriochlorophylls c from Chlorobium limicola. - J. Biol. Chem. 253: 6730-6737.
7. CHANDRIKA, V., NAIR, P. V. R. & KHAMBHADKAR, L. R. (1990): Distribution of phototrophic thionic bacteria in the anaerobic and micro-aerophilic strata of mangrove ecosystem of Cochin. - J. Mar. Biol. Assoc. India. 32: 77-84.
8. CLOERN, J. E., COLE, B. E. & OREMLAND, R. S. (1983): Autotrophic processes in meromictic Big Soda Lake, Nevada. - Limnol. Oceanogr. 28: 1049-1061.
9. COHEN, Y., KRUMBEIN, W. E. & SHILO, M. (1977): Solar lake (Sinai). 2. Distribution of photosynthetic microorganisms and primary production. - Limnol. Oceanogr. 22: 609-620.
10. CZECZUGA, B. & GRADZKI, F. (1973): Relationship between extracellular and cellular production in the sulphuric green bacterium Chlorobium limicola NADS, as compared to primary production of phytoplankton. - Hydrobiologia 42: 85-95.
11. EICHLER, B. & PFENNIG, N. (1990): Isolation and characteristics of Thiopedia rosea (neotype). - Arch. Microbiol. 155: 210-216.
12. GEST, H. & FAVINGER, J. L. (1983): Heliobacterium chlorum, an anoxygenic, brownish-green photosynthetic bacterium containing a "new" form of bacteriochlorophyll. - Arch. Microbiol. 136: 11-16.
13. GIESKES, W. W. & KRAAY, G. W. (1983): Dominance of Cryptophyceae during the phytoplankton spring bloom in the central North Sea by HPLC analysis of pigments. - Mar. Biol. 75: 179-185.
14. GLOE, A. (1977): Erstbeschreibung und Untersuchungen zur Struktur der neuen Bacteriochlorophyll e und cs und ihrer Homologen. - Thesis, Univ. Göttingen, Germany, 171 pp.
15. GLOE, A., PFENNIG, N., BROCKMAN, H. J. & TROWITZCH, W. (1975): A new bacteriochlorophyll from brown-colored Chlorobacteriaceae. - Arch. Microbiol. 102: 103-109.
16. GUERRERO, R., MONTESINOS, E., PEDROS-ALIO, C., ESTEVE, I., MAS, J., GEMERDEN, H. VAN, HOFMAN, P. A. G. & BAKKER, J. F. (1985): Phototrophic sulfur bacteria in two Spanish lakes: Vertical distribution and limiting factors. - Limnol. Oceanogr. 30: 919-931.
17. HOLT, J. G., KRIEG, N. R., SNEATH, P. H. A., STALEY, J. T. & WILLIAMS, S. T. (1994): Bergey's Manual of determinative bacteriology. - Williams and Wilkins, Baltimore, USA, 787 pp.
18. HURLEY, J. P. & WATRAS, C. J. (1991): Identification of bacteriochlorophylls in lakes via reverse phase HPLC. - Limnol. Oceanogr. 36: 307-315.
19. IMHOFF, J. F. (1988): Anoxygenic Phototrophic Bacteria. - In: AUSTIN, B. (ed.): Methods in Aquatic Bacteriology. - Wiley, Chichester, pp. 207-240.
20. _ (1992): Taxonomy, phylogeny, and general ecology of anoxygenic phototrophic bacteria. - Photosynthetic Prokaryotes 6: 53-92.
21. INDREBØ, G., PENGERUD, B. & DUNDAS, I. (1979): Microbial activities in a permanently stratified estuary. 2. Microbial activities at the oxic-anoxic interface. - Mar. Biol. 51: 305-309.
22. JEFFREY, S. W. (1997): Application of pigment methods to oceanography. - In: JEFFREY, S. W., MANTOURA, R. F. C. & WRIGHT, S. W. (eds.): Phytoplankton pigments in oceanography: guidelines to modern methods. - Monographs on oceanographic methodology 10. - 127-166, UNESCO Publishing, Paris.
23. JEFFREY, S. W., MANTOURA, R. F. C. & BIORLAND, T. (1997): Data for the identification of 47 key phytoplankton pigments. - In: JEFFREY, S. W., MANTOURA, R. F. C. & WRIGHT, S. W. (eds.): Phytoplankton pigments in oceanography. - Monographs on oceanographic methodology. - 661, UNESCO Publishing, Paris.
24. JENSEN, A., AASMUNDRUD, O. & EIMHJELLEN, K. E. (1964): Chlorophylls of photosynthetic bacteria. - Biochim. Biophys. Acta. 88: 466-479.
25. JØRGENSEN, B. B., KUENEN, J. G. & COHEN, Y. (1979): Microbial transformations of sulfur compounds in a stratified lake (Solar Lake, Sinai). - Limnol. Oceanogr. 24: 799-822.
26. KALAICHELVAN, P. T. & RAJKUMAR, B. (1990): Marine photosynthetic bacteria from southeast coast of India. - Indian J. Mar. Sci. 19: 61-62.
27. KIMBLE, L. K., MANDELCO, L., WOESE, C. R. & MADIGAN, M. T. (1995): Heliobacterium modesticaldum, sp-nov, a thermophilic Heliobacterium of hot-springs and volcanic soils. - Arch. Microbiol. 163: 259-267.
28. KORTHALS, H. J. & STEENBERGEN, C. L. M. (1985): Separation and quantification of pigments from natural phototrophic microbial populations. - FEMS Microbiol.Ecol. 31: 177-185.
29. KRAAY, G. W., ZAPATA, M. & VELDHUIS, M. J. (1992): Separation of chlorophylls c1, c2, and c3 of marine phytoplankton by reversed-phase-C18-High-Performance Liquid Chromatography. - J. Phycol. 28: 708-712.
30. KRUMBEIN, N. E. (1979): Photolithotrophic and chemoorganotrophic activity of bacteria and algae as related to beachrock formation and degradation (Gulf of Aqaba, Sinai). - Geomicrobiol. J. 1: 139-203.
31. KRUMBEIN, W. E., COHEN, Y. & SHILO, M. (1977): Solar Lake (Sinai). 4. Stromatolitic cyanobacterial mats. - Limnol. Oceanogr. 22: 635-656.
32. LASSEN, C., PLOUG, H. & JØRGENSEN, B. B. (1992): Microbial photosynthesis and spectral scalar irradiance in coastal marine sediments of Limfjorden, Denmark. -Limnol. Oceanogr. 37: 760-772.
33. MADIGAN, M. T. (1988): Microbiology, physiology, and ecology of phototrophic bacteria. - In: ZEHNDER, A. J. (ed.): Biology of anaerobic microorganisms. - John Wiley & Sons, New York, pp. 39-111.
34. MANTOURA, R. F. C. & LLEWELLYN, C. A. (1983): The rapid determination of algal chlorophyll and carotenoid pigments and their breakdown products in natural waters by reverse-phase high-performance liquid chromatography. - Anal. Chim. Acta. 151: 297-314.
35. OELZE, J. (1985): Analysis of bacteriochlorophylls. - Methods Microbiol. 18: 257-284.
36. OLSON, J. M. & ROMANO, C. A. (1962): A new chlorophyll from green bacteria. - Biochim. Biophys. Acta. 59: 726-728.
37. ORMEROD, J. G. (1992): Physiology of the photosynthetic prokaryotes. Photosynthetic Procaryotes. - Biotechnol. Handb. 6: 93-120.
38. OVERMANN, J., CYPIONKA, H. & PFENNIG, N. (1992): An extremely low-light-adapted phototrophic sulfur bacterium from the Black Sea. - Limnol. Oceanogr. 37: 150-155.
39. PALMISANO, A. C., CRONIN, S. E. & DES-MARAIS, D. J. (1988): Analysis of lipophilic pigments from a phototrophic microbial mat community by high performance liquid chromatography. - J. Microbiol. Methods 8: 209-217.
40. PFENNIG, N. (1965): Anreicherungskulturen für rote und grüne Schwefelbakterien. -Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg., Abt. I Supplement 1: 179-189.
41. _ (1977): Phototrophic green and purple bacteria: a comparative, systematic survey. - Ann. Rev. Microbiol. 31: 275-290.
42. PFENNIG, N. & TRÜPER, H. G. (1973): The Rhodospirillales (phototrophic or photosynthetic bacteria). - In: LASKIN, A. I. & LECHEVALIER, H. A. (eds.): Handbook of Microbiology. - CRC Press, Cleveland, pp. 17-27.
43. _ _ (1981): Isolation of members of the families Chromatiaceae and Chlorobiaceae. - In: STARR, M. P., STOLP, H., TRUPER, H. G., BALOWS, A. & SCHLEGEL, H. G. (eds.): The Prokaryotes. A Handbook on habitats, isolation and identification of bacteria. - Springer-Verlag, Heidelberg.
44. PIERSON, B. K. & CASTENHOLZ, R. W. (1974): Studies of pigments and growth in Chloroflexus aurantiacus, a phototrophic filamentous bacterium. - Arch. Microbiol. 100: 285-305.
45. PIERSON, B. K., SANDS, V. M. & FREDERICK, J. L. (1990): Spectral irradiance and distribution of pigments in a highly layered marine microbial mat. - Appl. environ. Microbiol. 56: 2327-2340.
46. PLANTE-CUNY, M.-R., BARRANGUET, C., BONIN, D. & GRENZ, C. (1993): Does chlorophyllide a reduce reliability of chlorophyll a measurements in marine coastal sediments? - Aquatic Sci. 55: 19-30.
47. PSENCIK, J., SEARLE, G. F. W., HALA, J. & SCHAAFSMA, T. J. (1994): Fluorescence-detected magnetic-resonance (Fdmr) of green sulfur photosynthetic bacteria Chlorobium sp. - Photosynth. Res. 40: 1-10.
48. REPETA, D. J., SIMPSON, D. J., JØRGENSEN, B. B. & JANNASCH, H. W. (1989): Evidence for anoxygenic photosynthesis from the distribution of bacteriochlorophylls in the Black Sea. - Nature, London 342: 69-72.
49. RÜDIGER, W. & SCHOCK, S. (1988): Chlorophylls. - In: GOODWIN, T. W. (ed.): Plant pigments. - Academic Press, London, pp. 1-60.
50. SISTROM, W. R. (1966): The spectrum of bacteriochlorophyll in vivo: observations on mutants of Rhodopseudomonas spheroides unable to grow photosynthetically. -Photochem. Photobiol. 5: 845-856.
51. SMITH, J. H. C. & BENITEZ, A. (1955): Chlorophylls: analysis in plant material. - In: PEACH, K. & TRACEY, M. (eds.): Moderne Methoden der Pflanzenanalyse. -Springer-Verlag, Berlin, pp. 142-196.
52. STAL, L. J., GEMERDEN, H. VAN & KRUMBEIN, W. E. (1984): The simultaneous assay of chlorophyll and bacteriochlorophyll in natural microbial communities. - J. Microbiol. Methods 2: 295-306.
53. STANIER, R. Y. & SMITH, J. H. C. (1960): The chlorophylls of green bacteria. - Biochim. Biophys. Acta. 41: 478-484.
54. STEENBERGEN, C. L. M. & KORTHALS, H. J. (1982): Distribution of phototrophic microorganisms in the anaerobic and microaerophilic strata of Lake Vechten (The Netherlands). Pigment analysis and role in primary production. - Limnol. Oceanogr. 27: 883-895.
55. TAKAHASHI, M. & ICHIMURA, S. (1968): Vertical distribution and organic matter production of photosynthetic sulfur bacteria in Japanese lakes. - Limnol. Oceanogr. 13: 644-655.
56. _ _ (1970): Photosynthetic properties and growth of photosynthetic bacteria in lakes. - Limnol. Oceanogr. 15: 929-944.
57. TANAKA, K., KAKUNO, T., YAMASHITA, J. & HORIO, T. (1982): Purification and properties of chlorophyllase from greened rye seedlings. - J. Biochem. 92: 1763-1773.
58. _ _ _ _ (1983): Action of chlorophyllase purified from rye seedlings on light-harvesting bacteriochlorophyll of chromatophores and spheroplasts from Rhodospirillum rubrum. - J. Biochem. 93: 159-167.
59. TOLSTOY, A. & TOTH, I. (1980): Bacteriochlorophyll d and its interference on determination of chlorophyll a. - Arch. Hydrobiol. 89: 160-170.
60. VAN NIEL, C. B. (1971): Technic for the enrichment, isolation, and maintenance of photosynthetic bacteria. - In: COLLOWICK, A. S. P. & KAPLAN, N. V. (eds.): Methods in enzymology. - Academic Press, New York, pp. 3-28.
61. VILLANUEVA, J., GRIMALT, J. O., DE WIT, R., KEELY, B. J. & MAXWELL, J. R. (1994 a): Chlorophyll and carotenoid pigments in solar saltern microbial mats. -Geochim. Cosmochim. Acta 58: 4703-4715.
62. _ _ _ _ (1994 b): Sources and transformations of chlorophylls and carotenoids in a monomictic sulfate-rich karstic lake environment. - Org. Geochem. 22: 739-757.
63. WRIGHT, S. W., JEFFREY, S. W., MANTOURA, R. F. C., LLEWELLYN, C. A., BJORNLAND, T., REPETA, D. & WELSCHMEYER, N. (1991): Improved HPLC method for the analysis of chlorophylls and carotenoids from marine phytoplankton. - Mar. Ecol. Progr. Ser. 77: 183-196.
64. YURKOV, V. V. & VAN GEMERDEN, H. (1993): Abundance and salt tolerance of obligately aerobic, phototrophic bacteria in a marine mat. - Neth. J. Sea Res. 31: 57-62.
65. ZAPATA, M., AYALA, A. M., FRANCO, J. M. & GARRIDO, J. L. (1987): Separation of chlorophylls and their degradation products in marine phytoplankton by reversed-phase high-performance liquid chromatography. - Chromatographia 23: 26-30.