Sequence determination and genetic analysis of the leader region of various equine arteritis virus isolates

Advances in Experimental Medicine and Biology

Volumn 440, Issue , 1998, Pages 805-812

  Kheyar, A ^a   St Laurent, G ^a   Diouri, M ^a   Dufresne, J ^a   Archambault, D ^a  

^a UNIVERSITÉ DU QUÉBEC À MONTRÉAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; EQUINE VIRAL ARTERITIS VIRUS; GENE SEQUENCE; GENETIC ANALYSIS; NONHUMAN; OPEN READING FRAME; PRIORITY JOURNAL; RNA STRUCTURE; VIRAL GENETICS; VIRUS GENE;

EQUIDAE; EQUINE ARTERITIS VIRUS;

EID: 0031721787     PISSN: 00652598     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4615-5331-1_105     Document Type: Article

References (16)

1. Chen W. and Baric R.S., 1995, Function of a 5′-end genomic RNA mutation that evolves during persistent mouse hepatitis virus infection in vitro, J. Virol. 69: 7529-7540.
2. Den Boon J.A., Snijder E.J., Chirnside E.D., De Vries A.A.F., Horzinek M.C. and Spaan W.J.M., 1991, Equine arteritis virus is not a togavirus but belongs to the coronaviruslike superfamily, J. Virol. 65: 2910-2930.
3. De Vries A.A.F., Chirnside E.D., Bredenbeek P.J., Gravestein L.A., Horzinek M.C. and Spaan W.J.M., 1990, All subgenomic mRNAs of equine arteritis virus contain a common leader sequence, Nucleic Ac. Res. 18: 3241-3247.
4. De Vries A.A.F., Chirnside E.D., Horzinek M.C. and Rottier P.J.M., 1992, Structural proteins of equine arteritis virus, J. Virol. 66: 6294-6303.
5. Domingo E., Martinez-Salas E., Sobrino F., de la Torre J.C., Portela A., Ortin J., Lopez-Galindez C., Perez-Brena P., Villanueva N. and Najera R., 1985, The quasispecies (extremely heterogeneous) nature of viral RNA genome populations: biological relevance, a review, Gene 40: 1-8.
6. Duke G.M., Hoffman, M.A. and Palmenberg A.C., 1992, Sequence and structural elements that contribute to efficient encephalomyocarditis virus RNA translation, J. Virol. 66: 1602-1609.
7. Fukushi S., Katayama K., Kurihara C., Ishiyama N., Hoshini F.B., Ando T. and Oya A., 1994, Complete 5′ noncoding region is necessary for the efficient internal initiation of hepatitis C virus RNA, Biochem. Biophys. Res. Com. 199: 425-432.
8. Haller A.A., Stewart S.R. and Semler B.L., 1996, Attenuation stem-loop lesions in the 5′ noncoding region of poliovirus RNA: neuronal cell-specific translation defects, J. Virol. 70: 1467-1474.
9. Hofmann M.A., Senanayake S. and Brian D.A., 1993, A translation attenuating intraleader open reading frame is selected on coronavirus mRNAs during persistent infection, Proc. Natl. Acad. Sci. USA 90: 11733-11737.
10. Kheyar A., St-Laurent G. and Archambault D., 1996, Sequence determination of the extreme 5′ end of the equine arteritis virus leader region, Virus Genes 12: 291-295.
11. Kozak M., 1991, An analysis of vertebrate mRNA sequences: intimations of translational control, J. Cell Biol. 115: 887-903.
12. Macadam A.J., Ferguson G., Burlison J., Stone D., Skuce R., Almond J.W. and Minor P.D., 1992, Correlation of RNA secondary structure and attenuation of Sabin vaccine strains of poliovirus in tissue culture, Virology 189: 415-422.
13. McCollum W.H. and Swertzek T.W., 1978, Studies of an epizootic of equine arteritis virus in racehorses, J. Equine Med. Surg. 2: 459-464.
14. Romero J.R. and Rotbart H.A., 1995, Sequence analysis of the downstream 5′ nontranslated region of seven echovirus with different neurovirulence phenotypes, J. Virol. 69: 1370-1375.
15. Sanger F., Nicklen S. and Coulson A.R., 1977, DNA sequencing with chain-terminating inhibitors, Proc. Natl. Acad. Sci. USA 74: 5463-5467.
16. Van Dinten, L.C., Den Boon J.A., Wassenaar A.L.M., Spaan W.J.M. and Snijder E.J., 1997, An infectious arterivirus cDNA clone: identification of a replicase point mutation that abolishes discontinuous mRNA transcription, Proc. Natl. Acad. Sci. USA 94: 991-996.