Evidence for a third taxonomic subgroup of peanut stunt virus from China

Plant Disease

Volumn 82, Issue 9, 1998, Pages 992-998

  Zeyong, Xu ^a   Higgins, Colleen M ^b   Kunrong, Chen ^a   Dietzgen, Ralf G ^b   Zhongyi, Zhang ^a   Liying, Yang ^a   Xiaoping, Fang ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b UNIVERSITY OF QUEENSLAND   (Australia)

Author keywords

Coat protein gene; Cucumovirus

Indexed keywords

CHINA; COMPLEMENTARY DNA; NUCLEOTIDE SEQUENCE; PEANUT STUNT VIRUS; POLYMERASE CHAIN REACTION; TAXONOMY; VIRUS RNA;

ACER PENSYLVANICUM; ARACHIS HYPOGAEA; CHENOPODIUM AMARANTICOLOR; CHENOPODIUM QUINOA; CUCUMOVIRUS; PEANUT STUNT VIRUS; RNA VIRUSES;

EID: 0031715458     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PDIS.1998.82.9.992     Document Type: Article

References (26)

1. Ahmed, A. H. 1985. Identification of peanut stunt virus in the Sudan. Plant Dis. 69:173-174.
2. Beczner, L., and Devergne, J. C. 1979. Characterization of a new peanut stunt virus strain isolated from Trifolium pratense L. in Hungary. 1. Symptomatological and serological properties. Acta Phytopathol. Acad. Sci. Hung. 14:247-267.
3. Dayhoff, M. O., Barker, W. C., and Hunt, L. T. 1983. Establishing homologies in protein sequences. Methods Enzymol. 91:524-549.
4. Diaz-Ruiz, J. R., and Kaper, J. M. 1983. Nucleotide sequence relationship among thirty peanut stunt virus isolates determined by competition hybridization. Arch. Virol. 75:277-281.
5. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
6. Felsenstein, J. 1989. PHYLIP-phylogeny inference package. Version 3.2. Cladistics 5:164-166.
7. Francki, R. I. B., Mossop, D. W., and Hatta, T. 1979. Cucumber mosaic virus. CMI/AAB Descriptions of Plant Viruses, No. 213, Commonw. Mycol. Inst./Assoc. Appl. Biol., Kew, Eng.
8. Hu, C. C., Aboul-Ata, A. E., Naidu, R. A., and Ghabrial, S. A. 1997. Evidence for the occurrence of two distinct subgroups of peanut stunt cucumovirus strains: Molecular characterization of RNA3. J. Gen. Virol. 78:929-939.
9. Karasawa, A., Nakaho, K., Kakutani, T., Minobe, Y., and Ehara, Y. 1991. Nucleotide sequence of RNA3 of peanut stunt cucumovirus. Virology 185:464-467.
10. Karasawa, A., Nakaho, K., Kakutani, T., Minobe, Y., and Ehara, Y. 1992. Nucleotide sequence analyses of peanut stunt cucumovirus RNA1 and 2. J. Gen. Virol. 73:701-707.
11. Kimura, M. 1980. A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16:111-120.
12. Matthews, R. E. F. 1992. Criteria for the recognition of strains. Pages 482-503 in: Plant Virology. 3rd ed. Academic Press, San Diego.
13. Messing, I. 1983. Methods Enzymol. 101. R. Wu, L. Grossman, and K. Moldave, eds. Academic Press, New York. pp. 20-78.
14. Mink, G. I. 1972. Peanut stunt virus. CMI/AAB Descriptions of Plant Viruses, No. 92. Commonw. Mycol. Inst./Assoc. Appl. Biol., Kew, Eng.
15. Mink, G. I., Silbernagel, M. J., and Saksena, K. N. 1969. Host range, purification, and properties of the western strain of peanut stunt virus. Phytopathology 59:1625-1631.
16. Naidu, R. A., Collins, G. B., and Ghabrial, S. A. 1991. Nucleotide sequence analysis of a cDNA clone encoding the coat protein gene of peanut stunt virus. Plant Mol. Biol. 17:175-177.
17. Naidu, R. A., Hu, C.-C., Pennington, R. E., and Ghabrial, S. A. 1995. Differentiation of eastern and western strains of peanut stunt cucumovirus based on satellite RNA support and nucleotide sequence homology. Phytopathology 85:502-507.
18. Palukaitis, P., Roossinck, M. J., Dietzgen, R. G., and Francki, R. I. B. 1992. Cucumber mosaic virus. Adv. Virus Res. 41:281-348.
19. Rybicki, E. P. 1995. The Bromoviridae. In: Virus Taxonomy. Sixth Report of the International Committee on Taxonomy of Viruses. F. A. Murphy et al., eds. Arch. Virology, Suppl. 10:450-457.
20. Sanger, F., Nicklen, S., and Coulson, A. R. 1977: DNA sequencing with chain-terminating inhibitors. Proc. Nat. Acad. Sci., USA 74:5463-5467.
21. Tompson, J. D., Higgins, D. G., and Gibson, T. J. 1994. Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22:4673-4680.
22. Xu, Z., Barnett, O. W., and Gibson, P. B. 1986. Characterization of peanut stunt virus strains by host reactions, serology, and RNA patterns. Phytopathology 76:390-395.
23. Xu, Z., Chen, K., Chen, G., and Cao, G. 1994. Black locust, primary source of peanut stunt virus (PSV) for the PSV epidemics on peanut. Acta Phytopathol. Sinica 24:305-309.
24. Xu, Z., and Zhang, Z. 1985. Peanut stunt virus (PSV) mild strain, a new strain of PSV. Oil Crops China 2:68-72.
25. Xu, Z., and Zhang, Z. 1988. Distribution of peanut virus diseases and detection of viruses by serology in China. Oil Crops China 2:56-61.
26. Zhang, Z., Xu, Z., Chen, K., Chen, J., and Yang, S. 1990. A preliminary study on an isolate of peanut stunt virus from black locust tree. Chinese J. Virol. 6:380-382.