Analysis of Fusarium lateritium using RAPD and rDNA RFLP techniques

Mycological Research

Volumn 102, Issue 10, 1998, Pages 1259-1264

  Hyun, Jae Wook ^a   Clark, C A ^a  

^a LOUISIANA STATE UNIVERSITY AGRICULTURAL CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FUNGAL DISEASE; ROOT VEGETABLE;

FUNGI; FUSARIUM LATERITIUM; IPOMOEA BATATAS; MYXOGASTRIA; SOLANUM TUBEROSUM;

EID: 0031712675     PISSN: 09537562     EISSN: None     Source Type: Journal    
DOI: 10.1017/S0953756298006352     Document Type: Article

References (32)

1. Annamalai, P., Ishii, H., Lalithakumari, D. & Revathi, R. (1995). Polymerase chain reaction and its applications in fungal disease diagnosis. Journal of Plant Diseases and Protection 102, 91-104.
2. Appel, D. J. & Gordon, T. R. (1995). Intraspecific variation within populations of Fusarium oxysporum based on RFLP analysis of the intergenic spacer region of the rDNA. Experimental Mycology 19, 120-128.
3. Appel, D. J. & Gordon, T. R. (1996). Relationships among pathogenic and nonpathogenic isolates of Fusarium oxysporum based on the partial sequence of the intergenic spacer region of the ribosomal DNA. Molecular Plant-Microbe Interactions 9, 125-138.
4. Bentley, S. & Bassam, B. J. (1996). A robust DNA amplification fingerprinting system applied to analysis of genetic variation within Fusarium oxysporum f. sp. cubense. Journal of Phytopathology 144, 207-213.
5. Bentley, S., Pegg, K. G. & Dale, J. L. (1995). Genetic variation among a world-wide collection of isolates of Fusarium oxysporum f. sp. cubense analysed by RAPD-PCR fingerprinting. Mycological Research 99, 1378-1384.
6. Buscot, F., Wipe, D., Battista, C. D., Munch, J.-C., Botton, B. & Martin, F. (1996). DNA polymorphism in morels: PCR/RFLP analysis of the ribosomal DNA spacers and microsatellite-primed PCR. Mycological Research 100, 63-71.
7. Clark, C. A. (1992). Histological evidence that Fusarium lateritium is an exopathogen on sweetpotato with chlorotic leaf distortion. Phytopathology 82, 656-663.
8. Clark, C. A. & Hoy, M. W. (1994). Isolation of Fusarium lateritium from sweetpotato seed. Plant Disease 78, 585-587.
9. Clark, C. A. & Moyer, J. W. (1988). Compendium of Sweet Potato Diseases. The American Phytopathological Society: St. Paul, MN, U.S.A.
10. Clark, C. A., Hoy, M. W. & Nelson, P. E. (1995). Variation among isolates of Fusarium lateritium from sweetpotato for pathogenicity and vegetative compatibility. Phytopathology 85, 624-629.
11. Clark, C. A., Valverde, R. A., Wilder-Ayers, J. A. & Nelson, P. E. (1990). Fusarium lateritium, casual agent of sweetpotato chlorotic leaf distortion. Phytopathology 80, 741-744.
12. Cooke, D. E. L., Kennedy, D. M., Guy, D. C., Russell, J., Unkles, S. E. & Duncan, J. M. (1996). Relatedness of group I species of Phytophthora as assessed by randomly amplified polymorphic DNA (RAPDs) and sequences of ribosomal DNA. Mycological Research 100, 297-303.
13. Correll, J. C. (1991). The relationship between formae speciales, races, and vegetative compatibility groups in Fusarium oxysporum. Phytopathology 81, 1061-1064.
14. Crowhurst, R. N., Hawthorne, B. T., Rikkerink, E. H. A. & Templeton, D. (1991). Differentiation of Fusarium solani f. sp. cucurbitae races 1 and 2 by random amplification of polymorphic DNA. Current Genetics 20, 391-396.
15. Duncan, S., Barton, J. E. & O'Brien, P. A. (1993). Analysis of variation in isolates of Rhizoctonia solani by random amplified polymorphic DNA assay. Mycological Research 97, 1075-1082.
16. Edel, V., Steinberg, C., Avelange, I., Laguerre, G. & Alabouvette, C. (1995). Comparison of three molecular methods for the characterization of Fusarium oxysporum strains. Phytopathology 85, 579-585.
17. Erland, S., Henrion, B., Martin, F., Glover, L. A. & Alexander, I. J. (1994). Identification of the ectomycorrhizal basidiomycete Tylospora fibrillosa Donk by RFLP analysis of the PCR-amplified ITS and IGS regions of ribosomal DNA. New Phytologist 126, 525-532.
18. Grajal-Martin, M. J., Simson, C. J. & Muehlbauer, F. J. (1993). Use of random amplified polymorphic DNA (RAPD) to characterise race 2 of Fusarium oxysporum f. sp. pisi. Phytopathology 83, 612-614.
19. Hseu, R.-S., Wang, H.-H., Wang, H.-F. & Moncalvo, J.-M. (1996). Differentiation and grouping of isolates of the Ganoderma lucidum complex by random amplified polymorphic DNA-PCR compared with grouping on the basis of internal transcribed spacer sequences. Applied and Environmental Microbiology 62, 1354-1363.
20. Icochea, T., Duarte, V. & Clark, C. A. (1994). Occurrence of sweetpotato chlorotic leaf distortion in Brazil and Peru caused by Fusarium lateritium. Plant Disease 78, 754.
21. Kanematsu, S. & Naito, S. (1995). Genetic characterization of Rhizoctonia solani AG-2-3 by analyzing restriction fragment length polymorphisms of nuclear ribosomal DNA internal transcribed spacers. Annals of the Phytopathological Society of Japan 61, 18-21.
22. Kelly, A., Aleala-Jimenez, A. R., Bainbridge, B. W., Heale, J. B., Perez-Artes, E. & Jimenez-Diaz, R. M. (1994). Use of genetic fingerprinting and random amplified polymorphic DNA to characterise pathotypes of Fusarium oxysporum f. sp. ciceris infecting chickpea. Phytopathology 84, 1293-1298.
23. Kihurani, A. W., Skoglund, L. G. & Gatumbi, R. W. (1993). Occurrence of sweetpotato chlorotic leaf distortion caused by Fusarium lateritium in Kenya. Plant Disease 77, 1260-1261.
24. Lee, S. B. & Taylor, J. W. (1992). Phylogeny of five fungus-like protoctistan Phytophthora species, inferred from the internal transcribed spacers of ribosomal DNA. Molecular Biology and Evolution 9, 636-653.
25. Marlatt, M. L., Correll, J. C., Kaufmann, P. & Cooper, P. E. (1996). Two genetically distinct populations of Fusarium oxysporum f. sp. lycopersici race 3 in the United States. Plant Disease 80, 1336-1342.
26. Nelson, P. E., Juba, J. H. & Clark, C. A. (1995). An unusual strain of Fusarium lateritium affecting sweetpotato. Mycologia 87, 507-509.
27. Persson, Y., Erland, S. & Jansson, H.-B. (1996). Identification of nematode-trapping fungi using RFLP analysis of the PCR-amplified ITS region of ribosomal DNA. Mycological Research 100, 531-534.
28. Ristaino, J. B., Averre, C. W. & Abad, G. (1991). Occurrence of sweetpotato chlorotic leaf distortion (Fusarium lateritium) in North Carolina. Plant Disease 75, 750.
29. Rohlf, F. J. (1990). NTSYS-pc, Numerical Taxonomy and Multivariate Analysis System. State University of New York: Stony Brook.
30. White, T. J., Bruns, T., Lee, S. & Taylor, J. (1990). In PCR Protocols: A Guide to Methods and Applications. (ed. M. A. Innis, D. H. Gelfand, J. J. Sninsky, T. J. White, (1990), (pp. 315-322). Academic Press: San Diego.
31. Windels, C. E., Burnes, P. M. & Kommedahl, T. (1988). Five-year preservation of Fusarium species on silica gel and soil. Phytopathology 78, 107-109.
32. Yoon, C. S. (1992). Molecular Systematics and Population Genetics of Hypoxylon Truncatum Sensu Miller Using RAPD. Ph.D. Thesis, Korea University, Seoul.