Relationship of the pelargonium flower break carmovirus (PFBV) coat protein gene with that of other carmoviruses

Archives of Virology

Volumn 143, Issue 9, 1998, Pages 1823-1829

  Berthome R ^a   Kusiak, C ^a   Renoir, J P ^a   Albouy, J ^a   Freire, M A ^a   Dinant, S ^a  

^a CEMAGREF   (France)

Author keywords

[No Author keywords available]

Indexed keywords

CARNATION MOTTLE VIRUS; DIANTHOVIRUS; GENE SEQUENCING; GENETIC ANALYSIS; IMMUNOPRECIPITATION; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA POLYMERASE; SAGUARO CACTUS VIRUS; TOMBUSVIRUS; VIRUS GENOME; VIRUS INFECTION;

BASE SEQUENCE; CAPSID; CARMOVIRUS; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PROMOTER REGIONS (GENETICS); REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

CACTACEAE; CARNATION MOTTLE VIRUS; CARNEGIEA GIGANTEA; DIANTHOVIRUS; DIANTHUS CARYOPHYLLUS; PELARGONIUM; PELARGONIUM FLOWER BREAK VIRUS; SAGUARO CACTUS VIRUS; TOMBUSVIRUS;

EID: 0031688276     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s007050050420     Document Type: Article

References (38)

1. Paludan N, Begtrup J (1987) Pelargonium flower break virus and tomato ringspot virus: Infection trials, symptomatology and diagnosis. Tidsskr Planteavl 91: 183-193
2. Krczal G, Albouy J, Damy I, Kusiak C, Moreau C, Berkelmann JP, Wohanka W (1995) Transmission of pelargonium flower break virus in irrigation systems and by thrips. Plant Dis 79: 163-166
3. Murphy FA, Fauquet CM, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo MA, Summers MD (1995) Virus Taxonomy. Classification and Nomenclature of Viruses. Sixth Report of the International Committee of Taxonomy of Viruses. Springer, Wien New York (Arch Virol [Suppl] 10)
4. Morris TJ, Carrington JC (1988) Carnation mottle virus and viruses with similar properties. In: Koenig R (ed) The plant viruses, vol 3. Polyhedral virions with monopartite RNA genome. Plenum Press, New York, pp 73-112
5. Morozov SYU, Ryabov EV, Leiser RM, Zavriev SK (1995) Use of highly conserved motifs in plant virus RNA polymerases as the tags for specific detection of carmovirus-related RNA-dependent RNA polymerase genes. Virology 207: 312-315
6. Guilley H, Carrington JC, Balázs E, Jonard G, Richards K, Morris TJ (1985) Nucleotide sequence and genome organisation of carnation mottle virus RNA. Nucleic Acids Res 13: 6 663-6 677
7. Shotnicki ML, Mackenzie AM, Torronen M, Gibbs AJ (1993) The genomic sequence of cardamine chlorotic fleck carmovirus. J Gen Virol 74: 1 933-1 937
8. You XJ, Kim JW, Stuart GW, Bozarth RF (1995) The nucleotide sequence of cowpea mottle virus and its assignment to the genus carmovirus. J Gen Virol 76: 2 841-2 845
9. Weng Z, Xiong Z (1997) Genome organisation and gene expression of saguaro cactus carmovirus. J Gen Virol 78: 525-534
10. Dolja VV, Koonin EV (1991) Phylogeny of capsid proteins of small icosahedral RNA plant viruses. J Gen Virol 72: 1 481-1 486
11. Stone OM, Hollings M (1973) Some properties of pelargonium flower-break virus. Ann Appl Biol 75: 15-23.
12. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, New York
13. Devereux J, Haeberli P, Smithies G (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12: 387-395
14. Laemmli UK (1970). Cleavage of structural proteins during assembly of the head of bacteriophage T4. Nature 227: 680-685
15. Riviere CJ, Rochon DM (1990) Nucleotide sequence and genomic organisation of melon necrotic spot virus. J Gen Virol 71:1 887-1 896
16. Carrington JC, Heaton L, Zudema D, Hillman BI, Morris TJ (1989) The structure of turnip crinkle virus. Virology 170: 219-226
17. Tavazza M, Lucioli A, Ancora G, Benvenuto E (1989) cDNA cloning of artichoke mottle crinkle virus RNA and localization and sequencing of coat protein gene. Plant Mol Biol 13: 685-692
18. Domier LL, Lukasheva LI, D'Arcy CJ (1994) Coat protein sequence of RMV-like strains of barley yellow dwarf virus separate them from other luteoviruses. Intervirology 37: 2-5
19. Veidt I, Lot H, Leiser M, Sheidecker D, Guilley H, Richards K, Jonard G (1988) Nucleotide sequence of beet western yellows virus RNA. Nucleic Acids Res 16:9 917-9 932
20. Mäkinen K, Tamm T, Naess V, Truve E, Puurand Ü, Munthe T, Saarma M (1995) Characterisation of cocksfoot mottle sobemovirus genomic RNA and sequence comparison with related viruses. J Gen Virol 76: 2817-2 825
21. Rubino L, Burgyan J, Russo M (1995) Molecular cloning and complete nucleotide sequence of carnation Italian ringspot tombusvirus genomic and defective interfering RNAs. Arch Virol 140: 2 027-2 039
22. Rochon DM, Tremaine JH (1989) Complete nucleotide sequence of the cucumber necrosis virus genome. Virology 169: 251-259
23. Dalmay T, Rubino L, Burgyan J, Kollar A, Russo M (1993) Functional analysis of cymbidium ringspot virus genome. Virology 194: 697-704
24. Nutter RC, Scheets K, Panganiban LC, Lommel SA (1989) The complete nucleotide sequence of maize chlorotic mottle virus genome. Nucleic Acids Res 17: 3 163-3 177
25. Mayo MA, Robinson DJ, Jolly CA, Hyman L (1989) Nucleotide sequence of potato leafroll luteovirus RNA. J Gen Virol 70: 1 037-1 051
26. Rubino L, Russo M, Martelli GP (1995) Sequence analysis of pothos latent virus genomic RNA. J Gen Virol 76: 2 835-2 839
27. Wu S, Rinehart CA, Kaesberg P (1987) Sequence and organisation of southern bean mosaic virus genomic RNA. Virology 161: 73-80
28. Hearne PQ, Knorr DA, Hiliman BI, Morris TJ (1990) The complete genome structure and synthesis of infectious RNA from clones of tomato bushy stunt virus. Virology 177: 141-151
29. Meulewaeter F, Seurink J, Van Emmelo J (1990) Genome structure of tobacco necrosis virus strain A. Virology 177: 699-709
30. Coutts RHA, Ridjen JE, Siabas AR, Lomonosoff GP, Wise PJ (1991) The complete nucleotide sequence of tobacco necrosis virus strain D. J Gen Virol 72: 1 521-1 529
31. Richardson JS (1981) The anatomy and taxonomy of protein structure. Adv Prot Chem 34: 167-339
32. Carrington JC, Morris TJ (1986) High resolution mapping of carnation mottle virus-associated RNAs. Virology 150: 196-206
33. Gardner J, Schofield P, Lismaa T, Nicholson A (1996) SEQVU version 1.1. The Carvan Institute of Medical Research
34. Wang J, Simon A (1997) Analysis of the two subgenomic RNA promoters for turnip crinkle virus in vivo and in vitro. Virology 232: 174-186
35. Riviere CJ, Pot J, Tremaine JH, Rochon DM (1989) Coat protein of melon necrotic spot carmovirus is more similar to those of tombusvirus than those of carmovirus. J Gen Virol 70: 3 033-3 042
36. Lommel SA, Weston-Fina M, Xiong Z, Lomonossoff GP (1988) The nucleotide sequence and gene organization of red clover necrotic mosaic virus RNA-2. Nucleic Acids Res 16: 8 587-8 602
37. Xiong Z, Lommel SA (1989) The complete nucleotide sequence and genome organisation of red clover necrotic mosaic virus RNA-1. Virology 171: 543-554
38. Boonham N, Henry CM, Wood KR (1995) The nucleotide sequence and the proposed genome organisation of oat chlorotic stunt virus, a new soil-borne virus of cereals. J Gen Virol 76: 2 025-2 034