메뉴 건너뛰기




Volumn 14, Issue 7, 1998, Pages 624-631

An NMR assignment module implemented in the gifa NMR processing program

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER ANALYSIS; COMPUTER PROGRAM; DATA BASE; INFORMATION PROCESSING; INTERNET; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN STRUCTURE;

EID: 0031682193     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/14.7.624     Document Type: Article
Times cited : (21)

References (25)
  • 1
    • 0040300415 scopus 로고
    • A spectral correlation function for efficient sequential NMR assignments of uniformly N-15-labeled proteins
    • Bartels, C. and Wüthrich, K. (1994) A spectral correlation function for efficient sequential NMR assignments of uniformly N-15-labeled proteins. J. Biomol. NMR, 4, 775-785.
    • (1994) J. Biomol. NMR , vol.4 , pp. 775-785
    • Bartels, C.1    Wüthrich, K.2
  • 2
    • 0343459675 scopus 로고
    • The program XEASY for computer-supported NMR spectral analysis of biological macromolecules
    • Bartels, C., Xia, T.H., Billeter, M., Güntert, P. and Wüthrich, K. (1995) The program XEASY for computer-supported NMR spectral analysis of biological macromolecules. J Biomol. NMR, 6, 1-10.
    • (1995) J Biomol. NMR , vol.6 , pp. 1-10
    • Bartels, C.1    Xia, T.H.2    Billeter, M.3    Güntert, P.4    Wüthrich, K.5
  • 3
    • 0000714031 scopus 로고    scopus 로고
    • Automated sequence-specific NMR assignment of homologous proteins using the program GARANT
    • Bartels, C., Billeter, M., Güntert, P. and Wüthrich, K. (1996) Automated sequence-specific NMR assignment of homologous proteins using the program GARANT. J. Biomol. NMR, 7, 207-213.
    • (1996) J. Biomol. NMR , vol.7 , pp. 207-213
    • Bartels, C.1    Billeter, M.2    Güntert, P.3    Wüthrich, K.4
  • 4
    • 0000441606 scopus 로고    scopus 로고
    • GARANT - A general algorithm for resonance assignment of multidimensional nuclear magnetic resonance spectra
    • Bartels, C., Güntert, P., Billeter, M. and Wüthrich, K. (1997) GARANT - A general algorithm for resonance assignment of multidimensional nuclear magnetic resonance spectra. J. Comp. Chem., 18, 139-149.
    • (1997) J. Comp. Chem. , vol.18 , pp. 139-149
    • Bartels, C.1    Güntert, P.2    Billeter, M.3    Wüthrich, K.4
  • 5
    • 12044252858 scopus 로고
    • Methodological advances in protein NMR
    • Bax, A. and Grzesiek, S. (1993) Methodological advances in protein NMR. Account Chem. Res., 26, 131-138.
    • (1993) Account Chem. Res. , vol.26 , pp. 131-138
    • Bax, A.1    Grzesiek, S.2
  • 6
    • 0011178240 scopus 로고
    • Computer-assisted assignment of multidimensional NMR spectra of proteins - Application to 3D NOESY-HMQC and TOCSY-HMQC spectra
    • Bernstein, R., Cieslar, C., Ross, A., Oschkinat, H., Freund, J. and Holak, T.A. (1993) Computer-assisted assignment of multidimensional NMR spectra of proteins - application to 3D NOESY-HMQC and TOCSY-HMQC spectra. J. Biomol. NMR, 3, 245-251.
    • (1993) J. Biomol. NMR , vol.3 , pp. 245-251
    • Bernstein, R.1    Cieslar, C.2    Ross, A.3    Oschkinat, H.4    Freund, J.5    Holak, T.A.6
  • 8
    • 0031576336 scopus 로고    scopus 로고
    • Torsion angle dynamics for NMR structure calculation with the new program DYANA
    • Güntert, P., Mumenthaler, C. and Wüthrich, K. (1997) Torsion angle dynamics for NMR structure calculation with the new program DYANA. J. Mol. Biol., 273, 283-298.
    • (1997) J. Mol. Biol. , vol.273 , pp. 283-298
    • Güntert, P.1    Mumenthaler, C.2    Wüthrich, K.3
  • 10
    • 34249765651 scopus 로고
    • NMR view: A computer program for the visualization and analysis of NMR data
    • Johnson, B.A. and Blevins, R.A. (1994) NMR view: A computer program for the visualization and analysis of NMR data. J. Biomol. NMR, 4, 603-614.
    • (1994) J. Biomol. NMR , vol.4 , pp. 603-614
    • Johnson, B.A.1    Blevins, R.A.2
  • 11
    • 0028673711 scopus 로고
    • Automated and semiautomated analysis of homo- and heteronuclear multidimensional nuclear magnetic resonance spectra of proteins: The program Pronto
    • Methods in Enzymology, Oppenheimer, N.J. and James, T.L. (eds). Academic Press, San Diego, CA
    • Kjaer, M., Andersen, K.V. and Poulsen, F.M. (1994) Automated and semiautomated analysis of homo- and heteronuclear multidimensional nuclear magnetic resonance spectra of proteins: The program Pronto. In Methods in Enzymology, Oppenheimer, N.J. and James, T.L. (eds), Nuclear Magnetic Resonance, Part C, 239. Academic Press, San Diego, CA, pp. 288-307.
    • (1994) Nuclear Magnetic Resonance, Part C , vol.239 , pp. 288-307
    • Kjaer, M.1    Andersen, K.V.2    Poulsen, F.M.3
  • 12
    • 0001250026 scopus 로고
    • ANSIG: A program for the assignment of protein 1H 2D NMR spectra by interactive computer graphics
    • Kraulis, P.J. (1989) ANSIG: a program for the assignment of protein 1H 2D NMR spectra by interactive computer graphics. J. Magn. Reson., 84, 627-633.
    • (1989) J. Magn. Reson. , vol.84 , pp. 627-633
    • Kraulis, P.J.1
  • 13
    • 0031133492 scopus 로고    scopus 로고
    • Automated resonance assignment of proteins using heteronuclear 3D NMR. 2. Side chain and sequence-specific assignment
    • Li, K.B. and Sanctuary, B.C. (1997a) Automated resonance assignment of proteins using heteronuclear 3D NMR. 2. Side chain and sequence-specific assignment. J Chem. Inf. Comput Sci., 37, 467-477.
    • (1997) J Chem. Inf. Comput Sci. , vol.37 , pp. 467-477
    • Li, K.B.1    Sanctuary, B.C.2
  • 14
    • 0009654864 scopus 로고    scopus 로고
    • Automated resonance assignment of proteins using heteronuclear 3D NMR. Backbone spin systems extraction and creation of polypeptides
    • Li, K.B. and Sanctuary, B.C. (1997b) Automated resonance assignment of proteins using heteronuclear 3D NMR. Backbone spin systems extraction and creation of polypeptides. J. Chem. Inf. Comput. Sci., 37, 359-366.
    • (1997) J. Chem. Inf. Comput. Sci. , vol.37 , pp. 359-366
    • Li, K.B.1    Sanctuary, B.C.2
  • 15
    • 0003880237 scopus 로고    scopus 로고
    • O'Reilly & Associates, Inc. Sebastopol, CA
    • Lutz, M. (1996) Programming Python. O'Reilly & Associates, Inc. Sebastopol, CA.
    • (1996) Programming Python
    • Lutz, M.1
  • 16
    • 0000154528 scopus 로고
    • Computer assignment of the backbone resonances of labelled proteins using two-dimensional correlation experiments
    • Morelle, N., Brutscher, B., Simorre, J.P. and Marion, D. (1995) Computer assignment of the backbone resonances of labelled proteins using two-dimensional correlation experiments. J. Biomol. NMR, 5, 154-160.
    • (1995) J. Biomol. NMR , vol.5 , pp. 154-160
    • Morelle, N.1    Brutscher, B.2    Simorre, J.P.3    Marion, D.4
  • 18
    • 0028434739 scopus 로고
    • Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: A demonstration of the connectivity tracing assignment tools (CONTRAST) software package
    • Olson, J.B. and Markley, J.L. (1994) Evaluation of an algorithm for the automated sequential assignment of protein backbone resonances: A demonstration of the connectivity tracing assignment tools (CONTRAST) software package. J. Biomol. NMR, 4, 385-410.
    • (1994) J. Biomol. NMR , vol.4 , pp. 385-410
    • Olson, J.B.1    Markley, J.L.2
  • 20
    • 0000477505 scopus 로고    scopus 로고
    • Gifa V 4: A complete package for NMR data set processing
    • Pons, J.L., Malliavin, T.E. and Delsuc, M.A. (1996) Gifa V 4: A complete package for NMR data set processing. J. Biomol. NMR, 8, 445-452.
    • (1996) J. Biomol. NMR , vol.8 , pp. 445-452
    • Pons, J.L.1    Malliavin, T.E.2    Delsuc, M.A.3
  • 21
    • 0004207406 scopus 로고
    • O'Reilly & Associates, Inc., Sebastopol, CA
    • Wall, L. and Schwartz, R.L. (1993) Programming Perl. O'Reilly & Associates, Inc., Sebastopol, CA.
    • (1993) Programming Perl
    • Wall, L.1    Schwartz, R.L.2
  • 23
    • 0029109378 scopus 로고
    • NMR - This other method for protein and nucleic acid structure determination
    • Wüthrich, K. (1995) NMR - This other method for protein and nucleic acid structure determination. Acta Crystallogr. D Biol. Crystallogr., 51, 249-270.
    • (1995) Acta Crystallogr. D Biol. Crystallogr. , vol.51 , pp. 249-270
    • Wüthrich, K.1
  • 24
    • 0028399041 scopus 로고
    • Automated sequencing of amino acid spin systems in proteins using multidimensional HCC (CO)NH-TOCSY spectroscopy and constraints propagation methods from artificial intelligence
    • Zimmerman, D.E. and Montelione, G.T. (1994) Automated sequencing of amino acid spin systems in proteins using multidimensional HCC (CO)NH-TOCSY spectroscopy and constraints propagation methods from artificial intelligence. J. Biomol. NMR, 4, 241-256.
    • (1994) J. Biomol. NMR , vol.4 , pp. 241-256
    • Zimmerman, D.E.1    Montelione, G.T.2
  • 25
    • 0028883616 scopus 로고
    • Automated analysis of nuclear magnetic resonance assignments for proteins
    • Zimmerman, D.E. and Montelione, G.T. (1995) Automated analysis of nuclear magnetic resonance assignments for proteins. Curr. Opin. Struct. Biol., 5, 664-673.
    • (1995) Curr. Opin. Struct. Biol. , vol.5 , pp. 664-673
    • Zimmerman, D.E.1    Montelione, G.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.