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Volumn 14, Issue 6, 1998, Pages 508-515

SSMAL: Similarity searching with alignment graphs

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; BIOLOGY; COMPUTER PROGRAM; DATA BASE; PRIORITY JOURNAL;

EID: 0031671418     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/14.6.508     Document Type: Article
Times cited : (5)

References (18)
  • 2
    • 0030093114 scopus 로고    scopus 로고
    • A flexible Motif search technique based on Generalized Profiles
    • Bucher, P., Karplus, K., Moeri, N. and Hofman, K. (1996) A flexible Motif search technique based on Generalized Profiles. Comput. Chem., 20, 3-24.
    • (1996) Comput. Chem. , vol.20 , pp. 3-24
    • Bucher, P.1    Karplus, K.2    Moeri, N.3    Hofman, K.4
  • 4
    • 0028221642 scopus 로고
    • Volume changes in protein evolution
    • Appendix
    • Gerstein, M., Sonnhamer, E. and Chothia, C. (1994) Volume changes in protein evolution. J. Mol. Biol. 236, 1067-1078 (Appendix).
    • (1994) J. Mol. Biol. , vol.236 , pp. 1067-1078
    • Gerstein, M.1    Sonnhamer, E.2    Chothia, C.3
  • 5
    • 0028250468 scopus 로고
    • Profile analysis
    • Gribskov, M. (1994) Profile analysis. Methods Mol. Biol., 25, 247-266.
    • (1994) Methods Mol. Biol. , vol.25 , pp. 247-266
    • Gribskov, M.1
  • 6
  • 7
    • 0024766957 scopus 로고
    • A new method that simultaneously aligns and reconstructs ancestral sequences for any number of homologous sequences, when the phytogeny is given
    • Hein, J. (1989) A new method that simultaneously aligns and reconstructs ancestral sequences for any number of homologous sequences, when the phytogeny is given. Mol. Biol. Evol., 6, 649-668.
    • (1989) Mol. Biol. Evol. , vol.6 , pp. 649-668
    • Hein, J.1
  • 8
    • 0025342577 scopus 로고
    • Unified approach to alignment and phylogenies
    • Hein, J. (1990) Unified approach to alignment and phylogenies. Methods Enzymol., 183, 626-645.
    • (1990) Methods Enzymol. , vol.183 , pp. 626-645
    • Hein, J.1
  • 9
    • 0026410103 scopus 로고
    • Automated assembly of proteins blocks for database searching
    • Henikoff, S. and Henikoff, J.G. (1991) Automated assembly of proteins blocks for database searching. Nucleic Acids Res., 19, 6565-6572.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6565-6572
    • Henikoff, S.1    Henikoff, J.G.2
  • 10
    • 0026605537 scopus 로고
    • Clustal V: Improved software for multiple sequence alignment
    • Higgins, D., Fuchs, R. and Bleasby, A.J. (1992) Clustal V: improved software for multiple sequence alignment. Comput. Applic. Biosci., 8, 189-191.
    • (1992) Comput. Applic. Biosci. , vol.8 , pp. 189-191
    • Higgins, D.1    Fuchs, R.2    Bleasby, A.J.3
  • 11
    • 0025259313 scopus 로고
    • Methods for assessing the statistical significance of molecular sequences features by using general scoring schemes
    • Karlin, S. and Altschul, S.F. (1990) Methods for assessing the statistical significance of molecular sequences features by using general scoring schemes. Proc. Natl Acad. Sci. USA, 87, 2264-2268.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 2264-2268
    • Karlin, S.1    Altschul, S.F.2
  • 13
    • 0028181441 scopus 로고
    • Hidden Markov models in computational biology. Applications to protein modelling
    • Krogh, A., Brown, M., Mian, I.S., Siblander, K. and Haussler, D. (1994) Hidden Markov models in computational biology. Applications to protein modelling. J. Mol. Biol., 235, 1501-1531.
    • (1994) J. Mol. Biol. , vol.235 , pp. 1501-1531
    • Krogh, A.1    Brown, M.2    Mian, I.S.3    Siblander, K.4    Haussler, D.5
  • 15
    • 0030795485 scopus 로고    scopus 로고
    • The deferred path for the generalized tree alignment problem
    • Schwikowski, B. and Vingron, M. (1997) The deferred path for the generalized tree alignment problem. J. Comput. Biol., 4, 415-431.
    • (1997) J. Comput. Biol. , vol.4 , pp. 415-431
    • Schwikowski, B.1    Vingron, M.2
  • 16
    • 0028218683 scopus 로고
    • The modular arrangement of proteins as inferred from analysis of homology
    • Sonnhamer, E.L. and Kahn, D. (1994) The modular arrangement of proteins as inferred from analysis of homology. Protein Sci., 3, 482-492.
    • (1994) Protein Sci. , vol.3 , pp. 482-492
    • Sonnhamer, E.L.1    Kahn, D.2
  • 18
    • 84972546031 scopus 로고
    • Sequence comparison significance and Poisson approximation
    • Waterman, M. and Vingron, M. (1994) Sequence comparison significance and Poisson approximation. Stat. Sci., 9, 367-381.
    • (1994) Stat. Sci. , vol.9 , pp. 367-381
    • Waterman, M.1    Vingron, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.