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Volumn 75, Issue 3, 1998, Pages 1228-1236

Trapping electrophoresis and ratchets: A theoretical study for DNA- protein complexes

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0031656225     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(98)74042-1     Document Type: Article
Times cited : (22)

References (35)
  • 2
    • 0031003997 scopus 로고    scopus 로고
    • Thermodynamics and kinetics of a Brownian motor
    • Astumian, R. D. 1997. Thermodynamics and kinetics of a Brownian motor. Science. 276:917-922.
    • (1997) Science , vol.276 , pp. 917-922
    • Astumian, R.D.1
  • 3
    • 0001559604 scopus 로고    scopus 로고
    • Particle trapping and self-focusing in temporally asymmetric ratchets with strong field gradients
    • Chacron, M. J., and G. W. Slater. 1997. Particle trapping and self-focusing in temporally asymmetric ratchets with strong field gradients. Phys. Rev. E. 56:3446-3450.
    • (1997) Phys. Rev. E. , vol.56 , pp. 3446-3450
    • Chacron, M.J.1    Slater, G.W.2
  • 4
    • 33645047496 scopus 로고
    • Asymmetric unbiased fluctuations are sufficient for the operation of a correlation ratchet
    • Chialvo, D. R., and M. M. Millonas. 1995. Asymmetric unbiased fluctuations are sufficient for the operation of a correlation ratchet. Phys. Lett. A. 209:26-30.
    • (1995) Phys. Lett. A. , vol.209 , pp. 26-30
    • Chialvo, D.R.1    Millonas, M.M.2
  • 6
    • 0027396015 scopus 로고
    • Gel electrophoresis of an end-labeled DNA. I. Dynamics and trapping in constant fields
    • Défontaines, A. D., and J. L. Viovy. 1993. Gel electrophoresis of an end-labeled DNA. I. Dynamics and trapping in constant fields. Electrophoresis. 14:8-17.
    • (1993) Electrophoresis. , vol.14 , pp. 8-17
    • Défontaines, A.D.1    Viovy, J.L.2
  • 7
    • 0028219694 scopus 로고
    • Gel electrophoresis of end-labeled DNA. II. Dynamics and detrapping in pulsed fields
    • Défontaines, A. D., and J. L. Viovy. 1994. Gel electrophoresis of end-labeled DNA. II. Dynamics and detrapping in pulsed fields. Electrophoresis. 15:111-119.
    • (1994) Electrophoresis , vol.15 , pp. 111-119
    • Défontaines, A.D.1    Viovy, J.L.2
  • 8
    • 0001625794 scopus 로고
    • Simple model of trapping electrophoresis with complicated transient dynamics
    • Desruisseaux, C., and G. W. Slater. 1994. Simple model of trapping electrophoresis with complicated transient dynamics. Phys. Rev. E. 49:5885-5888.
    • (1994) Phys. Rev. E. , vol.49 , pp. 5885-5888
    • Desruisseaux, C.1    Slater, G.W.2
  • 9
    • 0029934293 scopus 로고    scopus 로고
    • Pulsed-field trapping electrophoresis: A computer simulation study
    • Desruisseaux, C., and G. W. Slater. 1996. Pulsed-field trapping electrophoresis: a computer simulation study. Electrophoresis. 17: 623-632.
    • (1996) Electrophoresis , vol.17 , pp. 623-632
    • Desruisseaux, C.1    Slater, G.W.2
  • 10
    • 0000521703 scopus 로고
    • "Gliding assays" for motor proteins: A theoretical analysis
    • Duke, T. A. J., T. E. Holy, and S. Leibler. 1995. "Gliding assays" for motor proteins: a theoretical analysis. Phys. Rev. Lett. 74:330-333.
    • (1995) Phys. Rev. Lett. , vol.74 , pp. 330-333
    • Duke, T.A.J.1    Holy, T.E.2    Leibler, S.3
  • 11
    • 0028012805 scopus 로고
    • Electrophoretic mobility of DNA in gels. I. New biased reptation theory including fluctuations
    • Duke, T. A. J., J. L. Viovy, and A. N. Semenov. 1994. Electrophoretic mobility of DNA in gels. I. New biased reptation theory including fluctuations. Biopolymers. 34:239-247.
    • (1994) Biopolymers , vol.34 , pp. 239-247
    • Duke, T.A.J.1    Viovy, J.L.2    Semenov, A.N.3
  • 12
    • 0029790881 scopus 로고    scopus 로고
    • Two-dimensional polyacrylamide gel electrophoresis
    • Dunn, M. J., and J. M. Corbett. 1996. Two-dimensional polyacrylamide gel electrophoresis. Methods Enzymol. 271:177-203.
    • (1996) Methods Enzymol. , vol.271 , pp. 177-203
    • Dunn, M.J.1    Corbett, J.M.2
  • 14
    • 0025328960 scopus 로고
    • Gel electrophoresis of micron-sized particles: A problem and a solution
    • Griess, A. G., and P. Serwer. 1990. Gel electrophoresis of micron-sized particles: a problem and a solution. Biopolymers. 29:1863-1866.
    • (1990) Biopolymers , vol.29 , pp. 1863-1866
    • Griess, A.G.1    Serwer, P.2
  • 15
    • 0006422808 scopus 로고    scopus 로고
    • Gel electrophoretic ratcheting for the fractionation of DNA-protein complexes
    • Griess, G. A., and P. Serwer. 1998. Gel electrophoretic ratcheting for the fractionation of DNA-protein complexes. Biophys. J. 74:A71.
    • (1998) Biophys. J. , vol.74
    • Griess, G.A.1    Serwer, P.2
  • 16
    • 0029817986 scopus 로고    scopus 로고
    • Capillary sodium dodecyl sulfate-gel electrophoresis of proteins
    • Guttman, A. 1996. Capillary sodium dodecyl sulfate-gel electrophoresis of proteins. Electrophoresis. 17:1333-1341.
    • (1996) Electrophoresis , vol.17 , pp. 1333-1341
    • Guttman, A.1
  • 17
    • 0027958156 scopus 로고
    • Electrophoretic mobility of DNA in gels. II. Systematic experimental study in agarose
    • Heller, C., T. A. J. Duke, and J. L. Viovy. 1994. Electrophoretic mobility of DNA in gels. II. Systematic experimental study in agarose. Biopolymers. 34:249-254.
    • (1994) Biopolymers , vol.34 , pp. 249-254
    • Heller, C.1    Duke, T.A.J.2    Viovy, J.L.3
  • 18
    • 0023650407 scopus 로고
    • Transient orientation of linear DNA molecules during pulsed-field electrophoresis
    • Holzwarth, G., C. B. Mckee, S. Steiger, and G. Crater. 1987. Transient orientation of linear DNA molecules during pulsed-field electrophoresis. Nucleic Acids Res. 15:10031-10044.
    • (1987) Nucleic Acids Res. , vol.15 , pp. 10031-10044
    • Holzwarth, G.1    Mckee, C.B.2    Steiger, S.3    Crater, G.4
  • 21
    • 5544237990 scopus 로고
    • Forced thermal ratchets
    • Magnasco, M. O. 1993. Forced thermal ratchets. Phys. Rev. Lett. 71: 1477-1481.
    • (1993) Phys. Rev. Lett. , vol.71 , pp. 1477-1481
    • Magnasco, M.O.1
  • 22
    • 0028085872 scopus 로고
    • Directional motion of Brownian particles induced by a periodic asymmetric potential
    • Rousselet, J., L. Salomé, A. Ajdari, and J. Prost. 1994. Directional motion of Brownian particles induced by a periodic asymmetric potential. Nature. 370:446-448.
    • (1994) Nature , vol.370 , pp. 446-448
    • Rousselet, J.1    Salomé, L.2    Ajdari, A.3    Prost, J.4
  • 23
    • 0029899425 scopus 로고    scopus 로고
    • Real-time velocity of DNA bands during field-inversion gel electrophoresis
    • Sabanayagam, C. R., and G. Holzwarth. 1996. Real-time velocity of DNA bands during field-inversion gel electrophoresis. Electrophoresis. 17: 1052-1059.
    • (1996) Electrophoresis , vol.17 , pp. 1052-1059
    • Sabanayagam, C.R.1    Holzwarth, G.2
  • 24
    • 0001402350 scopus 로고
    • Gel electrophoresis of DNA in moderate fields: The effect of fluctuations
    • Semenov, A. N., T. A. J. Duke, and J. L. Viovy. 1995. Gel electrophoresis of DNA in moderate fields: the effect of fluctuations. Phys. Rev. E. 51:1520-1537.
    • (1995) Phys. Rev. E. , vol.51 , pp. 1520-1537
    • Semenov, A.N.1    Duke, T.A.J.2    Viovy, J.L.3
  • 25
    • 4243306147 scopus 로고
    • Large particle gel electrophoresis
    • Serwer, P., and G. A. Griess. 1993. Large particle gel electrophoresis. Anal. Magazine. 21:M16-M20.
    • (1993) Anal. Magazine , vol.21
    • Serwer, P.1    Griess, G.A.2
  • 26
    • 0026669810 scopus 로고
    • A small (58-nm) attached sphere perturbs the sieving of 40-80-kilobase DNA in 0.2-2.5% agarose gels: Analysis of bacteriophage T7 capsid-DNA complexes by use of pulsed field electrophoresis
    • Serwer, P., S. J. Hayes, E. T. Moreno, and C. Y. Park. 1992. A small (58-nm) attached sphere perturbs the sieving of 40-80-kilobase DNA in 0.2-2.5% agarose gels: analysis of bacteriophage T7 capsid-DNA complexes by use of pulsed field electrophoresis. Biochemistry. 31: 8397-8405.
    • (1992) Biochemistry , vol.31 , pp. 8397-8405
    • Serwer, P.1    Hayes, S.J.2    Moreno, E.T.3    Park, C.Y.4
  • 27
    • 0027398084 scopus 로고
    • Theory of band broadening for DNA gel electrophoresis and sequencing
    • Slater, G. W. 1993. Theory of band broadening for DNA gel electrophoresis and sequencing. Electrophoresis. 14:1-7.
    • (1993) Electrophoresis , vol.14 , pp. 1-7
    • Slater, G.W.1
  • 28
    • 0029030863 scopus 로고
    • Trapping gel electrophoresis of end-labeled DNA: An analytical model for mobility and diffusion
    • Slater, G. W., C. Desruisseaux, C. Villeneuve, H. L. Guo, and G. Drouin. 1995. Trapping gel electrophoresis of end-labeled DNA: an analytical model for mobility and diffusion. Electrophoresis. 16:704-712.
    • (1995) Electrophoresis , vol.16 , pp. 704-712
    • Slater, G.W.1    Desruisseaux, C.2    Villeneuve, C.3    Guo, H.L.4    Drouin, G.5
  • 29
    • 0031075415 scopus 로고    scopus 로고
    • Bidirectional transport of polyelectrolytes using self-modulating entropic ratchets
    • Slater, G. W., H. L. Guo, and G. I. Nixon. 1997. Bidirectional transport of polyelectrolytes using self-modulating entropic ratchets. Phys. Rev. Lett. 78:1170-1173.
    • (1997) Phys. Rev. Lett. , vol.78 , pp. 1170-1173
    • Slater, G.W.1    Guo, H.L.2    Nixon, G.I.3
  • 30
    • 84996098737 scopus 로고
    • On the reptation theory of gel electrophoresis
    • Slater, G. W., and J. Noolandi. 1986. On the reptation theory of gel electrophoresis. Biopolymers. 25:431-454.
    • (1986) Biopolymers , vol.25 , pp. 431-454
    • Slater, G.W.1    Noolandi, J.2
  • 31
    • 0023355867 scopus 로고
    • On the stretching of DNA in the reptation theories of gel electrophoresis
    • Slater, G. W., J. Rousseau, and J. Noolandi. 1987. On the stretching of DNA in the reptation theories of gel electrophoresis. Biopolymers. 26:863-872.
    • (1987) Biopolymers , vol.26 , pp. 863-872
    • Slater, G.W.1    Rousseau, J.2    Noolandi, J.3
  • 32
    • 0027078887 scopus 로고
    • A computer simulation of trapping electrophoresis
    • Slater, G. W., and C. Villeneuve. 1992. A computer simulation of trapping electrophoresis. J. Polym. Sci. B. 30:1451-1457.
    • (1992) J. Polym. Sci. B. , vol.30 , pp. 1451-1457
    • Slater, G.W.1    Villeneuve, C.2
  • 33
    • 0027274907 scopus 로고
    • Pulsed-field acceleration: The electrophoretic behavior of large spherical particles in agarose gels
    • To, K.-Y., and T. R. C. Boyde. 1993. Pulsed-field acceleration: the electrophoretic behavior of large spherical particles in agarose gels. Electrophoresis. 14:597-600.
    • (1993) Electrophoresis , vol.14 , pp. 597-600
    • To, K.-Y.1    Boyde, T.R.C.2
  • 35
    • 0025062607 scopus 로고
    • DNA trapping electrophoresis
    • Ulanovsky, L., G. Drouin, and W. Gilbert. 1990. DNA trapping electrophoresis. Nature. 343:190-192.
    • (1990) Nature , vol.343 , pp. 190-192
    • Ulanovsky, L.1    Drouin, G.2    Gilbert, W.3


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