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Volumn 265, Issue 4, 1997, Pages 385-393

Role of the spacer BoxA of Escherichia coli ribosomal RNA operons in efficient 23 S rRNA synthesis in vivo

Author keywords

E. coli rrnB operon; Leader and spacer boxA mutations; Primer extension analysis; Regulation of rRNA synthesis; rRNA antitermination

Indexed keywords

RIBOSOME RNA; RNA 16S; RNA 23S; RNA POLYMERASE; SPACER DNA;

EID: 0031592481     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1996.0744     Document Type: Article
Times cited : (20)

References (29)
  • 1
    • 0025369425 scopus 로고
    • Antitermination of characterized transcriptional terminators by the Escherichia coli rrnG leader region
    • Albrechtsen, B., Squires, C. L., Li, S. & Squires, C. (1990). Antitermination of characterized transcriptional terminators by the Escherichia coli rrnG leader region. J. Mol. Biol. 213, 123-134.
    • (1990) J. Mol. Biol. , vol.213 , pp. 123-134
    • Albrechtsen, B.1    Squires, C.L.2    Li, S.3    Squires, C.4
  • 2
    • 0024457861 scopus 로고
    • Ribosomal RNA operon antitermination: Function of leader and spacer region boxB-boxA sequences and their conservation in diverse micro-organisms
    • Berg, K. L., Squires, C. & Squires, C. L. (1989). Ribosomal RNA operon antitermination: function of leader and spacer region boxB-boxA sequences and their conservation in diverse micro-organisms. J. Mol. Biol. 209, 345-358.
    • (1989) J. Mol. Biol. , vol.209 , pp. 345-358
    • Berg, K.L.1    Squires, C.2    Squires, C.L.3
  • 3
    • 0019513663 scopus 로고
    • Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli
    • Brosius, J., Dull, T. J., Sleeter, D. D. & Noller, H. F. (1981). Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J. Mol. Biol. 148, 107-127.
    • (1981) J. Mol. Biol. , vol.148 , pp. 107-127
    • Brosius, J.1    Dull, T.J.2    Sleeter, D.D.3    Noller, H.F.4
  • 4
    • 0023646046 scopus 로고
    • Feedback regulation of rRNA synthesis in Escherichia coli: Requirement for initiation factor IF2
    • Cole, J. R., Olsson, C. L., Hershey, J. W. B., Grunberg-Manago, M. & Nomura, M. (1987). Feedback regulation of rRNA synthesis in Escherichia coli: requirement for initiation factor IF2. J. Mol. Biol. 198, 383-392.
    • (1987) J. Mol. Biol. , vol.198 , pp. 383-392
    • Cole, J.R.1    Olsson, C.L.2    Hershey, J.W.B.3    Grunberg-Manago, M.4    Nomura, M.5
  • 5
    • 0027432869 scopus 로고
    • Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies
    • Condon, C., French, S., Squires, C. & Squires, C. L. (1993). Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies. EMBO J. 12, 4305-4315.
    • (1993) EMBO J. , vol.12 , pp. 4305-4315
    • Condon, C.1    French, S.2    Squires, C.3    Squires, C.L.4
  • 6
    • 0028804889 scopus 로고
    • Control of rRNA transcription in Escherichia coli
    • Condon, C., Squires, C. & Squires, C. L. (1995a). Control of rRNA transcription in Escherichia coli. Microbiol. Rev. 59, 623-645.
    • (1995) Microbiol. Rev. , vol.59 , pp. 623-645
    • Condon, C.1    Squires, C.2    Squires, C.L.3
  • 7
    • 0029048945 scopus 로고
    • rRNA operon multiplicity in Escherichia coli and the physiological implications of rrn inactivation
    • Condon, C., Liveris, D., Squires, C., Schwartz, I. & Squires, C. L. (1995b). rRNA operon multiplicity in Escherichia coli and the physiological implications of rrn inactivation. J. Bacteriol. 177, 4152-4156.
    • (1995) J. Bacteriol. , vol.177 , pp. 4152-4156
    • Condon, C.1    Liveris, D.2    Squires, C.3    Schwartz, I.4    Squires, C.L.5
  • 8
    • 0026768827 scopus 로고
    • How the phage lambda N gene product suppresses transcription termination: Communication of RNA polymerase with regulatory proteins mediated by signals in nascent RNA
    • Das, A. (1992). How the phage lambda N gene product suppresses transcription termination: communication of RNA polymerase with regulatory proteins mediated by signals in nascent RNA. J. Bacteriol. 174, 6711-6716.
    • (1992) J. Bacteriol. , vol.174 , pp. 6711-6716
    • Das, A.1
  • 9
    • 0017137372 scopus 로고
    • Cooperative effects of bacterial mutations affecting λ N gene expression
    • Friedman, D. I., Baumann, M. & Baron, L. S. (1976). Cooperative effects of bacterial mutations affecting λ N gene expression. Virology, 73, 119-127.
    • (1976) Virology , vol.73 , pp. 119-127
    • Friedman, D.I.1    Baumann, M.2    Baron, L.S.3
  • 10
    • 0026003204 scopus 로고
    • rRNA transcription rate in Escherichia coli
    • Gotta, S. L., Miller, O. L. Jr & French, S. L. (1991). rRNA transcription rate in Escherichia coli. J. Bacteriol. 173, 6647-6649.
    • (1991) J. Bacteriol. , vol.173 , pp. 6647-6649
    • Gotta, S.L.1    Miller O.L., Jr.2    French, S.L.3
  • 11
    • 0022475085 scopus 로고
    • DNA determinants of rRNA synthesis in E. Coli: Growth rate dependent regulation, feedback inhibition, upstream activation, antitermination
    • Gourse, R. L., de Boer, H. A. & Nomura, M. (1986). DNA determinants of rRNA synthesis in E. coli: growth rate dependent regulation, feedback inhibition, upstream activation, antitermination. Cell, 44, 197-205.
    • (1986) Cell , vol.44 , pp. 197-205
    • Gourse, R.L.1    De Boer, H.A.2    Nomura, M.3
  • 12
    • 0027193751 scopus 로고
    • Human immunodeficiency virus type 1 transactivator protein, Tat, stimulates transcriptional read-through of distal terminator sequences in vitro
    • Graeble, M. A., Churcher, M. J., Lowe, A. D., Gait, M. J. & Karn, J. (1993). Human immunodeficiency virus type 1 transactivator protein, Tat, stimulates transcriptional read-through of distal terminator sequences in vitro. Proc. Natl Acad. Sci. USA, 90, 6184-6188.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 6184-6188
    • Graeble, M.A.1    Churcher, M.J.2    Lowe, A.D.3    Gait, M.J.4    Karn, J.5
  • 13
    • 0027296170 scopus 로고
    • Transcriptional antitermination
    • Greenblatt, J., Nodwell, J. R. & Mason, S. W. (1993). Transcriptional antitermination. Nature, 364, 401-406.
    • (1993) Nature , vol.364 , pp. 401-406
    • Greenblatt, J.1    Nodwell, J.R.2    Mason, S.W.3
  • 14
    • 0029030755 scopus 로고
    • Point mutations in the leader boxA of a plasmid-encoded Escherichia coli rrnB operon cause defective antitermination in vivo
    • Heinrich, T., Condon, C., Pfeiffer, T. & Hartmann, R. K. (1995). Point mutations in the leader boxA of a plasmid-encoded Escherichia coli rrnB operon cause defective antitermination in vivo. J. Bacteriol. 177, 3793-3800.
    • (1995) J. Bacteriol. , vol.177 , pp. 3793-3800
    • Heinrich, T.1    Condon, C.2    Pfeiffer, T.3    Hartmann, R.K.4
  • 15
    • 0026527507 scopus 로고
    • Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho
    • Jin, D. J., Burgess, R. R., Richardson, J. P. & Gross, C. A. (1992). Termination efficiency at rho-dependent terminators depends on kinetic coupling between RNA polymerase and rho. Proc. Natl Acad. Sci. USA, 89, 1453-1457.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 1453-1457
    • Jin, D.J.1    Burgess, R.R.2    Richardson, J.P.3    Gross, C.A.4
  • 16
    • 0020789028 scopus 로고
    • Expression of rRNA and tRNA genes in Escherichia coli: Evidence for feedback regulation by products of rRNA operons
    • Jinks-Robertson, S., Gourse, R. L. & Nomura, M. (1983). Expression of rRNA and tRNA genes in Escherichia coli: evidence for feedback regulation by products of rRNA operons. Cell, 33, 865-876.
    • (1983) Cell , vol.33 , pp. 865-876
    • Jinks-Robertson, S.1    Gourse, R.L.2    Nomura, M.3
  • 17
    • 0021748170 scopus 로고
    • Antitermination of E. coli rRNA transcription is caused by a control region segment containing lambda nut-like sequences
    • Li, S. C., Squires, C. L. & Squires, C. (1984). Antitermination of E. coli rRNA transcription is caused by a control region segment containing lambda nut-like sequences. Cell, 38, 851-860.
    • (1984) Cell , vol.38 , pp. 851-860
    • Li, S.C.1    Squires, C.L.2    Squires, C.3
  • 18
    • 0026703203 scopus 로고
    • Host factor requirements for processive antitermination of transcription and suppression of pausing by the N protein of bacteriophage λ
    • Mason, S. W., Li, J. & Greenblatt, J. (1992). Host factor requirements for processive antitermination of transcription and suppression of pausing by the N protein of bacteriophage λ. J. Biol. Chem. 267, 19418-19426.
    • (1992) J. Biol. Chem. , vol.267 , pp. 19418-19426
    • Mason, S.W.1    Li, J.2    Greenblatt, J.3
  • 19
    • 0022450979 scopus 로고
    • Antitermination mechanism in rRNA operons of Escherichia coli
    • Morgan, E. A. (1986). Antitermination mechanism in rRNA operons of Escherichia coli. J. Bacteriol. 168, 1-5.
    • (1986) J. Bacteriol. , vol.168 , pp. 1-5
    • Morgan, E.A.1
  • 20
    • 0027453160 scopus 로고
    • Recognition of boxA antiterminator RNA by the E. coli antitermination factors NusB and ribosomal protein S10
    • Nodwell, J. R. & Greenblatt, J. (1993). Recognition of boxA antiterminator RNA by the E. coli antitermination factors NusB and ribosomal protein S10. Cell, 72, 261-268.
    • (1993) Cell , vol.72 , pp. 261-268
    • Nodwell, J.R.1    Greenblatt, J.2
  • 21
    • 0028957034 scopus 로고
    • The Escherichia coli ribosomal RNA leader nut region interacts specifically with mature 16 S RNA
    • Pardon, B. & Wagner, R. (1995). The Escherichia coli ribosomal RNA leader nut region interacts specifically with mature 16 S RNA. Nucl. Acids Res. 23, 932-941.
    • (1995) Nucl. Acids Res. , vol.23 , pp. 932-941
    • Pardon, B.1    Wagner, R.2
  • 22
    • 0028121454 scopus 로고
    • The Escherichia coli ribosomal RNA leader: A structural and functional investigation
    • Pardon, B., Thelen, L. & Wagner, R. (1994). The Escherichia coli ribosomal RNA leader: a structural and functional investigation. Biol. Chem. Hoppe-Seyler, 375, 11-20.
    • (1994) Biol. Chem. Hoppe-Seyler , vol.375 , pp. 11-20
    • Pardon, B.1    Thelen, L.2    Wagner, R.3
  • 23
    • 2642687335 scopus 로고
    • Defective antitermination of rRNA transcription and derepression of rRNA and tRNA synthesis in the nusB5 mutant of Escherichia coli
    • Sharrock, R. A., Gourse, R. L. & Nomura, M. (1985). Defective antitermination of rRNA transcription and derepression of rRNA and tRNA synthesis in the nusB5 mutant of Escherichia coli. Proc. Natl Acad. Sci. USA, 82, 5275-5279.
    • (1985) Proc. Natl Acad. Sci. USA , vol.82 , pp. 5275-5279
    • Sharrock, R.A.1    Gourse, R.L.2    Nomura, M.3
  • 24
    • 0027463435 scopus 로고
    • Ribosomal RNA antitermination in vitro: Requirement for Nus factors and one or more unidentified cellular components
    • Squires, C. L., Greenblatt, J., Li, J., Condon, C. and Squires, C. L. (1993). Ribosomal RNA antitermination in vitro: requirement for Nus factors and one or more unidentified cellular components. Proc. Natl Acad. Sci. USA, 90, 970-974.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 970-974
    • Squires, C.L.1    Greenblatt, J.2    Li, J.3    Condon, C.4    Squires, C.L.5
  • 25
    • 0022429275 scopus 로고
    • A mutation in an Escherichia coli ribosomal RNA operon that blocks the production of precursor 23 S ribosomal RNA by RNase III in vivo and in vitro
    • Stark, M. J. R., Gourse, R. L., Jemiolo, D. K. & Dahlberg, A. E. (1985). A mutation in an Escherichia coli ribosomal RNA operon that blocks the production of precursor 23 S ribosomal RNA by RNase III in vivo and in vitro. J. Mol. Biol. 182, 205-216.
    • (1985) J. Mol. Biol. , vol.182 , pp. 205-216
    • Stark, M.J.R.1    Gourse, R.L.2    Jemiolo, D.K.3    Dahlberg, A.E.4
  • 26
    • 0025049935 scopus 로고
    • Functional importance of the Escherichia coli ribosomal RNA leader boxA sequence for post-transcriptional events
    • Theißen, G., Behrens, S. E. & Wagner, R. (1990). Functional importance of the Escherichia coli ribosomal RNA leader boxA sequence for post-transcriptional events. Mol. Microbiol. 4, 1667-1678.
    • (1990) Mol. Microbiol. , vol.4 , pp. 1667-1678
    • Theißen, G.1    Behrens, S.E.2    Wagner, R.3
  • 28
    • 0029166388 scopus 로고
    • Effects of the antiterminator boxA on transcription elongation kinetics and ppGpp inhibition of transcription elongation in Escherichia coli
    • Vogel, U. & Jensen, K. F. (1995). Effects of the antiterminator boxA on transcription elongation kinetics and ppGpp inhibition of transcription elongation in Escherichia coli. J. Biol. Chem. 270, 18335-18340.
    • (1995) J. Biol. Chem. , vol.270 , pp. 18335-18340
    • Vogel, U.1    Jensen, K.F.2
  • 29
    • 0023646048 scopus 로고
    • Feedback regulation of rRNA synthesis: A mutational alteration in the anti-Shine-Dalgarno region of the 16 S rRNA gene abolishes regulation
    • Yamagishi, M., de Boer, H. A. & Nomura, M. (1987). Feedback regulation of rRNA synthesis: a mutational alteration in the anti-Shine-Dalgarno region of the 16 S rRNA gene abolishes regulation. J. Mol. Biol. 198, 547-550.
    • (1987) J. Mol. Biol. , vol.198 , pp. 547-550
    • Yamagishi, M.1    De Boer, H.A.2    Nomura, M.3


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