Molecular characterization and structural analysis of one alcohol dehydrogenase gene (GV-Adh 1) expressed during ripening of grapevine (Vitis vinifera L.) berry

Plant Science

Volumn 125, Issue 2, 1997, Pages 177-187

  Sarni Manchado, Pascale ^a   Verriès, Clotilde ^a   Tesnière, Catherine ^a  

^a CEMAGREF   (France)

Author keywords

Adh; Fruit; Gene; Grapevine (Vitis vinifera L.); Phylogeny; Ripening

Indexed keywords

ALCOHOL DEHYDROGENASE; PLANT DNA;

ARTICLE; CONTROLLED STUDY; FRUIT; GENE EXPRESSION; GENE STRUCTURE; MATURATION; NONHUMAN; PHYLOGENY; PROMOTER REGION;

EID: 0031591591     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-9452(97)04630-X     Document Type: Article

References (43)

1. [1] D.J. Llewellyn, E.J. Finnegan, J.G. Ellis, E.S. Dennis, W.J. Peacock, Structure and expression of an alcohol dehydrogenase 1 gene from Pisum sativum (cv. Greenfeast), J. Mol. Biol. 195 (1987) 115-123.
2. [2] T. Longhurst, E. Lee, R. Hinde, C. Brady, J. Speirs, Structure of the tomato Adh2 gene and Adh2 pseudogenes, and a study of Adh2 gene expression in fruit, Plant Mol. Biol 26 (1994) 1073-1084.
3. [3] P.J. Christie, M. Hahn, V. Walbot, Low-temperature accumulation of alcohol dehydrogenase-1 mRNA and protein activity in maize and rice seedlings, Plant Physiol. 95 (1991) 699-706.
4. [4] E.S. Dennis, M.M. Sachs, W.L. Gerlach, E.J. Finnegan, W.J. Peacock, Molecular analysis of the alcohol dehydrogenase 2 (Adh2) gene of maize, Nucl. Acids Res. 13 (1985) 727-743.
5. [5] D.P. Matton, P. Constabel, N. Brisson, Alcohol dehydrogenase gene expression in potato following elicitor and stress treatment, Plant Mol. Biol. 14 (1990) 775-783.
6. [6] M. Bucher, K.A. Brander, S. Sbicego, T. Mandel, C. Kuhlemeier, Aerobic fermentation in tobacco pollen, Plant Mol. Biol 28 (1995) 739-750.
7. [7] R.G. Gregerson, M. McLean, M. Beld, A.G.M. Gerats, J.N. Strommer, Structure, expression, chromosomal location and product of the gene encoding ADH1 in Petunia, Plant Mol. Biol. 17 (1991) 37-48.
8. [8] J.C. Ingersoll, M. Rothenberg, B.E. Liedl, K. Folkerts, D. Garvin, M.R. Hanson, J.J. Doyle, M.A. Mutschler, A novel anther-expressed adh-homologous gene in Lycoperxicon esculentum, Plant Mol. Biol. 26 (1994) 1875-1891.
9. [9] N. Terrier, F.X. Sauvage, C. Romieu, Absence de crise respiratoire, induction de l'activité alcool deshydrogénase et diminution de l'acidité vacuolaire lors de la maturation du raisin. In: Lonvaud-Funel (Ed.), Oenologie 95: 5th Symp. Inter. d'Oenologie, Ch. 1, Tec Doc, Paris, 1996, pp. 24-28.
10. [10] A.K. Kanellis, T. Solomos, K.A. Roubelakis-Angelakis, Suppression of cellulase and polygalacturonase and induction of alcohol dehydrogenase isoenzymes in avocado fruit mesocarp subjected to low oxygen stress. Plant Physiol. 96 (1991) 269-274.
11. [11] A. R Sun Chen, T.J.R. Chase, Alcohol dehydrogenase 2 and pyruvate decarboxylase induction in ripening and hypoxic tomato fruit, Plant Physiol. Biochem. 31 (1993) 875-885.
12. [12] D. Van der Straeten, R.A.R. Pousada, J. Gielen, M.V. van Montagu, Tomato alcohol dehydrogenase: Expression during fruit ripening and under hypoxic conditions, FEBS Lett. 295 (1991) 39-42.
13. [13] F.X. Sauvage, C. Romieu, J. Sarris, M. Pradal, J.P. Robin, C Flanxy, Evolution de quelques activités enzymatiques au cours de la maturation du raisin. Influence d'un stress hypoxique après la vendange, R. Fr. Oeno. 132 (1991) 14-20.
14. [14] C.M. Tesnière, C. Romieu, M.E. Vayda, Changes in the gene expression of grapes in response to hypoxia, Am. J. Enol. Vitic. 44 (1993) 445-451.
15. [15] C.M. Tesnière, C. Romieu, I. Dugelay, M.Z. Nicol, C. Flanzy, J.P. Robin, Partial recovery of grape energy metabolism upon aeration following anaerobic stress, J. Exp. Bot. 45 (1994) 145-151.
16. [16] J.E. Bowers, E.B. Bandman, C.P. Meredith, DNA finger-printing characterization of some wine grape cultivars, Am. J. Enol. Vitic. 44 (1993) 266-274.
17. [17] R.G. Gregerson, L. Cameron, M. McLean, P. Dennis, J. Strommer, Structure, expression, chromosomal location and product of the gene encoding ADH2 in Petunia, Genet. 133 (1993) 999-1007.
18. [18] J. Sambrook, E.F. Fritsch and T. Maniatis, in: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1989.
19. [19] F. Sanger, S. Nicklen, A.R. Coulson, DNA sequencing with chain-terminating inhibitors, Proc. Natl. Acad. Sci. USA. 74 (1977) 5463-5467.
20. [20] C. Tesnière, M.E.V. Vayda, Method for the isolation of high quality RNA from grape berry tissues without contaminating tannins or carbohydrates, Plant Mol. Biol. Rep. 9 (1991) 242-251.
21. [21] D.G. Higgins, A.J. Bleasby, R. Fuchs, CLUSTAL V: Improved software for multiple sequence alignment, Comput. Appl. Biosci. 8 (1992) 189-191.
22. [22] T.H. Jukes and C.R. Cantor, Evolution of protein molecules, in: H.N. Munro (Ed.), Mammalian Protein Metabolism. Academic Press, New York, 1969, pp. 21-132.
23. [23] N. Saitou, M. Nei, The neighbor-joining method: A new method for reconstructing phylogenetic trees, Mol. Biol. Evol. 4 (1987) 406-425.
24. [24] P. Sarni-Manchado, A. Ageorges, C. Verriès, D. Paris and C. Tesnière, Induction de gènes au cours de la maturation du raisin. Etude d'un gène de l'alcool deshydrogénase, in: A. Lonvaud-Funel (Ed.), Oenologie 95: 5th Symp. Inter. d'Oenologie, Ch.I, Tec Doc, Paris, 1996, pp. 38-43.
25. [25] R. Breathnach, P. Chambon, Organization and expression of eucaryotic split genes coding for proteins, Ann. Rev. Biochem. 50 (1981) 349-383.
26. [26] B.A. Hanley, M.A. Schuler, Plant intron sequences: Evidence for distinct groups of introns, Nucl. Acids Res. 16 (1988) 7159-7175.
27. [27] C.P. Joshi, An inspection of the domain between putative TATA box and translation start site in 79 plant genes, Nucl. Acids Res. 15 (1987) 6643-6653.
28. [28] H.A. Lütcke, K.C. Chow, F.S. Micket, K.A. Moss, H.F. Kern, G.A. Scheele, Selection of AUG initiation codons differs in plants and animals, EMBO J. 6 (1987) 43-48.
29. [29] J. Messing, D. Geraghty, G. Herdecker, H. Nien-Tai, J. Kridl and I. Rubenstein, Plant gene structure, in: T. Kosuge, O. Merridith and A. Hollaender (Eds.), Genetic Engineering in Plants, Plenum Press, New York, 1983, pp. 211-227.
30. [30] Q. Zhu, T. Dabi, C. Lamb, TATA box and initiator functions in the accurate transcription of a plant minimal promoter in vitro, Plant Cell 7 (1995) 1681-1689.
31. [31] C. Dean, S. Tamaki, P. Dunsmuir, M. Favreau, C. Katayama, H. Dooner, J. Bedbrook, mRNA transcripts of several plant genes are polyadenylated at multiple sites in vivo, Nucl. Acids Res. 14 (1986) 2229-2240.
32. [32] A.L. Paul, R.J. Ferl, In vivo footprinting reveals unique cis-elements and different modes of hypoxic induction in maize Adh1 and Adh2, Plant Cell 3 (1991) 159-168.
33. [33] E.S. Dennis, J.C. Walker. D.S. Llewellyn, J.G. Ellis, K. Singh, J.G. Tokuhisa, D.R. Wolstenholme and W.J. Peacock, The response to anaerobic stress: transcriptional regulation of genes for anaerobically induced proteins, in: D. von Wettstein and N.H. Chua (Eds.), Plant Molecular Biology, NATO ASI Series, Vol. 140, Plenum Press, New York, 1987, pp. 407-417.
34. [34] J.C. Walker, E.A. Howard, E.S. Dennis, W.J. Peacok, DNA sequences required for anaerobic expression of the maize alcohol dehydrogenase 1 gene, Proc. Natl. Acad. Sci. USA. 84 (1987) 6624-6628.
35. [35] D.J. Wolyn, G. Jelenkovic, Nucleotide sequence of an alcohol dehydrogenase gene in octoptoid strawberry (Fragaria × Ananassa Duch.), Plant Mol. Biol. 14 (1990) 855-857.
36. [36] E.F. Atkinson, L.A. Cameron, J.N. Strommer, Isolation and characterization of the Adh2 5' region from Petunia hybrida, Plant Mol. Biol. 30 (1996) 367-371.
37. [37] I. Molina, M. Nicolas, J. Crouzet, Grape alcohol dehydrogenase. I. Isolation and characterization, Am. J. Enol. Vitic. 37 (1986) 169-173.
38. [38] S. Yokoyama, D.E. Harry, Molecular phylogeny and evolutionary rates of alcohol dehydrogenases in vertebrates and plants, Mol. Biol. Evol. 10 (1993) 1215-1226.
39. [39] H. Jörnvall, Differences in thiol groups and multiple forms of rat liver alcohol dehydrogenase, Biochem. Biophys. Res. Com. 53 (1973) 1096-1101.
40. [40] J.P. Shaw, M. Rekik, F. Schwager, S. Harayama, Kinetic studies on benzyl alcohol dehydrogenase encoded by TOL plasmid pWW0. A member of the zinc-containing long chain alcohol dehydrogenase family, J. Biol. Chem. 268 (1993) 10842-10850.
41. [41] C.I. Bränden, H. Eklund, C. Cambillau, A.J. Pryor, Correlation of exons with structural domains in alcohol dehydrogenase. EMBO J. 3 (1984) 1307-1310.
42. [42] H. Eklund, B. Nordström, E. Zeppezauer, G. Söderlund, I. Ohlsson, T. Boiwe, B.O. Söderberg, O. Tapia, C.I. Bränden, Three-dimensional structure of horse liver alcohol dehydrogenase at 2.4 Å resolution, J. Mol. Biol. 102 (1976) 27-59.
43. [43] W.H. Wolfe, Identification of grape varieties by isozyme banding patterns. Am. J. Enol. Vitic. 27 (1976) 68-73.