New satellite RNAs, but no DI RNAs, are found in natural populations of tomato bushy stunt tombusvirus

Virology

Volumn 239, Issue 2, 1997, Pages 277-284

  Celix, Ana ^a   Rodriguez Cerezo, Emilio ^a   Garcia Arenal, Fernando ^a,b  

^a CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

^b Electrotechnical Section   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

SATELLITE RNA;

ARTICLE; EVOLUTION; NORTHERN BLOTTING; OPEN READING FRAME; PLANT VIRUS; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; SPECIES DIFFERENTIATION; TOMATO; TOMBUSVIRUS; VIRUS INFECTION;

LYCOPERSICON ESCULENTUM; NICOTIANA CLEVELANDII; RNA VIRUSES; SOLANUM MELONGENA; TOMATO BUSHY STUNT VIRUS; TOMBUSVIRUS;

EID: 0031583847     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1997.8864     Document Type: Article

References (32)

1. Aranda M. A., Fraile A., García-Arenal F. Genetic variability and evolution of the satellite RNA of cucumber mosaic virus during natural epidemics. J. Virol. 67:1993;5896-5901.
2. Aranda M. A., Fraile A., Dopazo J., Malpica J. M., García-Arenal J. M. Contribution of mutation and RNA recombination to the evolution of a plant pathogenic RNA. J. Mol. Evol. 44:1997;81-88.
3. Bangham C. R., Kirkwood T. B. L. Defective interfering particles: Effects in modulating virus growth and persistence. Virology. 179:1990;821-826.
4. Burgyan J., Grieco F., Russo M. A defective interfering RNA molecule in cymbidium ringspot virus infections. J. Gen. Virol. 70:1989;235-239.
5. Burgyan J., Rubino L., Russo M. De novo generation of cymbidium ringspot virus defective interfering RNA. J. Gen. Virol. 72:1991;505-509.
6. Chang Y. C., Borja M., Scholthof H. B., Jackson A. O., Morris T. J. Host effects and sequences essential for accumulation of defective interfering RNAs of cucumber necrosis and tomato bushy stunt tombusviruses. Virology. 210:1995;41-53.
7. Donis-Keller H., Maxam A. M., Gilbert W. Mapping adenines, guanines and pyrimidines in RNA. Nucleic Acids Res. 4:1977;2527-2538.
8. England T. E., Uhlenbeck O. C. 3′-Terminal labelling of RNA with T4 RNA ligase. Nature. 275:1978;560-561.
9. Fichot O., Girard M. An improved method for sequencing RNA templates. Nucleic Acids Res. 18:1990;6162.
10. Gallitelli D., Hull R. Characterization of satellite RNAs associated with tomato bushy stunt virus and five other definitive tombusviruses. J. Gen. Virol. 66:1985;1533-1543.
11. Gallitelli D., Hull R., Koenig R. Relationships among viruses in the tombusvirus group: Nucleic acid hybridization studies. J. Gen. Virol. 66:1985;1523-1531.
12. Grieco F., Burgyan J., Russo M. The nucleotide sequence of cymbidium ringspot virus RNA. Nucleic Acids Res. 17:1989;6383.
13. Grieco F., Lanave C., Gallitelli D. Evolutionary dynamics of cucumber mosaic virus satellite RNA during natural epidemics in Italy. Virology. 229:1997;166-174.
14. Hearne P. Q., Knorr D. A., Hillman B. I., Morris T. J. The complete genome structure and synthesis of infectious RNA from clones of tomato bushy stunt virus. Virology. 177:1990;141-151.
15. Hillman B. I., Morris T. J., Schlegel D. E. Effects of low-molecular-weight RNA and temperature on tomato bushy stunt virus symptom expression. Phytopathology. 75:1985;361-365.
16. Hillman B. I., Carrington J. C., Morris T. J. A defective interfering RNA that contains a mosaic of a plant virus genome. Cell. 51:1987;427-433.
17. Kirkwood T. B. L., Bangham C. R. M. Cycles, chaos, and evolution in virus cultures: A model of defective interfering particles. Proc. Natl. Acad. Sci. USA. 91:1994;8685-8689.
18. Knorr D. A., Mullin R. H., Hearne P. Q., Morris T. J. De novo generation of defective interfering RNAs of tomato bushy stunt virus by high multiplicity passage. Virology. 181:1991;193-202.
19. Kollar A., Dalmay T., Burgyan J. Defective interfering RNA-mediated resistance against cymbidium ringspot tombusvirus in transgenic plants. Virology. 193:1993;313-318.
20. Law M. D., Morris T. J. De novo generation and accumulation of tomato bushy stunt virus defective interfering RNAs without serial host passage. Virology. 198:1994;377-380.
21. Luis-Arteaga M., Rodriguez-Cerezo E., Fraile A., Saez E., Garcia-Arenal F. Different tomato bushy stunt virus strains that cause disease outbreaks in solanaceous crops in Spain. Phytopathology. 86:1996;535-542.
22. Mawassi M., Karasev A. V., Mietkiewska E., Gafny R., Lee R. F., Dawson W. O., Barjoseph M. Defective RNA molecules associated with citrus tristeza virus. Virology. 208:1995a;383-387.
23. Mawassi M., Mietkiewska E., Hilf M. E., Ashoulin L., Karasev A. V., Gafny R., Lee R. F., Garnsey S. M., Dawson W. O., Barjoseph M. Multiple species of defective RNAs in plants infected with citrus tristeza virus. Virology. 214:1995b;264-268.
24. Romero J., Huang Q., Pogany J., Bujarski J. J. Characterization of defective interfering RNA components that increase symptom severity of broad bean mottle virus infections. Virology. 194:1993;576-584.
25. Roossinck M. J., Sleat D., Palukaitis P. Satellite RNAs of plant viruses: Structure and biological effects. Microbiol. Rev. 56:1992;265-279.
26. Roux L., Simon A. E., Holland J. J. Effects of defective interfering viruses on virus replication and pathogenesis in vitro and in vivo. Adv. Virus Res. 40:1991;181-211.
27. Rubino L., Burgyan J., Grieco F., Russo M. Sequence analysis of cymbidium ringspot virus satellite and defective interfering RNAs. J. Gen. Virol. 71:1990;1655-1660.
28. Russo M., Burgyan J., Martelli G. P. Molecular biology of tombusviridae. Advances in Virus Research. 1994;Academic Press, San Diego. p. 381-428.
29. J. Sambrook, E. F. Fritsch, T. Maniatis, 1989, Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
30. Steere R. L. Strains of tomato bushy stunt virus. Phytopathology. 43:1953;485.
31. Stenger D. C. Genotypic variability and the occurrence of less than genome-length viral DNA forms in a field population of beet curly top geminivirus. Phytopathology. 85:1995;1316-1322.
32. White K. A. Formation and evolution of Tombusvirus defective interfering RNAs. Semin. Virol. 7:1997;409-416.