Three different GB virus C/hepatitis G virus genotypes. Phylogenetic analysis and a genotyping assay based on restriction fragment length polymorphism

FEBS Letters

Volumn 407, Issue 1, 1997, Pages 51-58

  Mukaide, Motokazu ^a,b   Mizokami, Masashi ^a   Orito, Etsuro ^a   Ohba, Ken ichi ^a   Nakano, Tatsunori ^a   Ueda, Ryuzo ^a   Hikiji, Kazumasa ^b   Iino, Shiro ^c   Shapiro, Sarah ^d   Lahat, Nitza ^d   Park, Young Min ^e   Kim, Boo Sung ^e   Oyunsuren, Tsendsuren ^f   Rezieg, Mohammed ^g   Al Ahdal, Mohammed N ^g   Lau, Johnson Y N ^h  

^a NAGOYA CITY UNIV MEDICAL SCHOOL   (Japan)

^b SRL INC   (Japan)

^c ST MARIANNA UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^d CARMEL MEDICAL CENTER   (Israel)

^e The Catholic University of Korea College of Medicine   (South Korea)

^f Academy of Science   (Mongolia)

^g KING FAISAL SPECIALIST HOSPITAL AND RESEARCH CENTER   (Saudi Arabia)

^h UNIVERSITY OF FLORIDA   (United States)

Author keywords

5' UTR; GB virus C; Genotype; Hepatitis G virus; Phylogenetic tre; Restriction fragment length polymorphism; Reverse transcription polymerase chain reaction

Indexed keywords

ARTICLE; GENOTYPE; HEPATITIS VIRUS; HUMAN; PHYLOGENY; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SERUM;

BASE SEQUENCE; CLONING, MOLECULAR; FLAVIVIRIDAE; GENOTYPE; HUMANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

GB VIRUS C/HEPATITIS G VIRUS;

EID: 0031582211     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(97)00136-1     Document Type: Article

References (15)

1. Simons, J.N., Leary, T.P., Dawson, G.J., Pilot-Matias, T.J., Muerhoff, A.S., Schlauder, G.G., Desai, S.M. and Mushuhwar, I.K. (1995) Nature Med. 1, 564-569.
2. Linnen, J., Wages Jr., J., Zhang-Keck, Z.Y., Fry, K.E., Krawczynski, K.Z., Alter, H., Koonin, E., Gallagher, M., Alter, M., Hadziyannis, S., Karayiannis, P., Fung, K., Nakatsuji, Y., Shih, J.W., Young, L., Piatak Jr., M., Hoover, C., Fernandez, J., Chen, S., Zou, J.C., Morris, T., Hyams, K.C., Ismay, S., Lifson, J.D., Hess, G., Foung, S.K.H., Thomas, H., Bradley, D., Margolis, H. and Kim, J.P. (1996) Science 271, 505-508.
3. Masuko, K., Mitsui, T., Iwano, K., Yamazaki, C., Okuda, K., Meguro, T., Murayama, N., Inoue, T., Tsuda, F., Okamoto, H., Miyakawa, Y. and Mayumi, M. (1996) N. Engl. J. Med. 334, 1485-1490.
4. Aikawa, T., Sugai, Y. and Okamoto, H. (1996) Lancet 334, 195-196.
5. Zuckerman, A.J. (1996) Lancet 347, 558-559.
6. Muerhoff, A.S., Simons, J.N., Leary, T.P., Erker, J.C., Chalmers, M.L., Pilot-Matias, T.J., Dawson, G.J., Desai, S.M. and Mushahwar, I.K. (1996) J. Hepatol. 25, 379-384.
7. Ina, Y. (1994) CABIOS 10, 11-12.
8. Gojobori, T., Ishii, K. and Nei, M. (1982) J. Mol. Evol. 18, 414-423.
9. Nei, M. (1975) Molecular Population and Genetics, North-Holland, Amsterdam.
10. Saitou, N. and Nei, M. (1987) Mol. Biol. Evol. 4, 406-425.
11. Felstein, J. (1993) PHYLIP interface package, ver. 3.5. Department of Genetics, University of Washington, Seattle, WA.
12. Felsenstein, J. (1985) Evolution 39, 783-791.
13. Simons, J.N., Desai, S.M., Schultz, D.E., Lemon, S.M. and Muschahwar, I.K. (1996) J. Virol. 70, 6126-6135.
14. Simmonds, P., Smith, D.B., McOmish, F., Yap, P.L., Kolberg, J., Urdea, M.S. and Holmes, E.C. (1994) J. Gen. Virol. 75, 1053-1061.
15. Ohba, K., Mizokami, M., Ohno, T., Suzuki, K., Orito, E., Ina, Y., Lau, J.Y.N. and Gojobori, T. (1995) Virus Res. 36, 201-214.