-
1
-
-
0024284650
-
Recognition of DNA operator by the repressor of phage 434: A view at high resolution
-
Aggarwal A. K., Rodger D. W., Drottar M., Ptashne M., Harrison S. C. Recognition of DNA operator by the repressor of phage 434: a view at high resolution. Science. 242:1988;899-907.
-
(1988)
Science
, vol.242
, pp. 899-907
-
-
Aggarwal, A.K.1
Rodger, D.W.2
Drottar, M.3
Ptashne, M.4
Harrison, S.C.5
-
2
-
-
0023202898
-
Structure of the repressor-operator complex of bacteriophage 434
-
Anderson J. E., Ptashne M., Harrison S. C. Structure of the repressor-operator complex of bacteriophage 434. Nature. 326:1987;846-852.
-
(1987)
Nature
, vol.326
, pp. 846-852
-
-
Anderson, J.E.1
Ptashne, M.2
Harrison, S.C.3
-
3
-
-
0027146277
-
Operator sequence context influences amino-acid-base-pair interactions in 434 repressor-operator complexes
-
Bell A. C., Koudelka G. B. Operator sequence context influences amino-acid-base-pair interactions in 434 repressor-operator complexes. J. Mol. Biol. 234:1993;542-553.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 542-553
-
-
Bell, A.C.1
Koudelka, G.B.2
-
4
-
-
0029866646
-
Galvanization of biology: A growing appreciation for the roles of zinc
-
Berg J. M., Shi Y. Galvanization of biology: a growing appreciation for the roles of zinc. Science. 271:1996;1081-1085.
-
(1996)
Science
, vol.271
, pp. 1081-1085
-
-
Berg, J.M.1
Shi, Y.2
-
5
-
-
0027478518
-
Assembly of the Arc repressor-operator complex: Cooperative interactions between DNA-bound dimers
-
Brown B. M., Sauer R. T. Assembly of the Arc repressor-operator complex: cooperative interactions between DNA-bound dimers. Biochemistry. 32:1993;1354-1363.
-
(1993)
Biochemistry
, vol.32
, pp. 1354-1363
-
-
Brown, B.M.1
Sauer, R.T.2
-
6
-
-
0000182975
-
XL1-Blue: A high efficiency plasmid transforming recA Escherichia coli strain with beta-galactosidase selection
-
Bullock W. O., Fernandez J. M., Short J. M. XL1-Blue: a high efficiency plasmid transforming recA Escherichia coli strain with beta-galactosidase selection. BioTechniques. 5:1987;376-380.
-
(1987)
BioTechniques
, vol.5
, pp. 376-380
-
-
Bullock, W.O.1
Fernandez, J.M.2
Short, J.M.3
-
8
-
-
0026346185
-
Gel retardation
-
Carey J. Gel retardation. Methods Enzymol. 208:1991;103-117.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 103-117
-
-
Carey, J.1
-
9
-
-
0027949172
-
Expression, purification and functional characterisation of the carboxyl-terminal domain fragment of bacteriophage 434 repressor
-
Carlson P. A., Koudelka G. B. Expression, purification and functional characterisation of the carboxyl-terminal domain fragment of bacteriophage 434 repressor. J. Bacteriol. 176:1994;6907-6914.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 6907-6914
-
-
Carlson, P.A.1
Koudelka, G.B.2
-
10
-
-
0027994717
-
Toward a code for interaction of zinc fingers with DNA: Selection of randomized fingers displayed on phage
-
Choo Y., Klug A. Toward a code for interaction of zinc fingers with DNA: selection of randomized fingers displayed on phage. Proc. Natl Acad. Sci. USA. 91:1994a;11163-11167.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 11163-11167
-
-
Choo, Y.1
Klug, A.2
-
11
-
-
0028046895
-
Selection of DNA binding sites for zinc fingers using rationally randomized DNA reveals coded interactions
-
Choo Y., Klug A. Selection of DNA binding sites for zinc fingers using rationally randomized DNA reveals coded interactions. Proc. Natl Acad. Sci. USA. 91:1994b;11168-11172.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 11168-11172
-
-
Choo, Y.1
Klug, A.2
-
12
-
-
0025736650
-
The isolated N-terminal domain of the c repressor of bacterophage 16-3 is functional in DNA binding in vivo and in vitro
-
Dallman G., Marincs F., Papp P., Gaszner M., Orosz L. The isolated N-terminal domain of the c repressor of bacterophage 16-3 is functional in DNA binding in vivo and in vitro. Mol. Gen. Genet. 227:1991;106-112.
-
(1991)
Mol. Gen. Genet.
, vol.227
, pp. 106-112
-
-
Dallman, G.1
Marincs, F.2
Papp, P.3
Gaszner, M.4
Orosz, L.5
-
13
-
-
0021173913
-
Mutations that alter the DNA sequence specificity of the catabolite gene activator protein of E. coli
-
Ebright R. H., Cossart P., Gicquel-Sanzey B., Beckwith J. Mutations that alter the DNA sequence specificity of the catabolite gene activator protein of E. coli. Nature. 311:1984;232-235.
-
(1984)
Nature
, vol.311
, pp. 232-235
-
-
Ebright, R.H.1
Cossart, P.2
Gicquel-Sanzey, B.3
Beckwith, J.4
-
15
-
-
0026650770
-
Sequence-specific DNA binding by a two zinc-finger peptide from the Drosophila melanogaster Tramtrack protein
-
Fairall L., Harrison S. D., Travers A. A., Rhodes D. Sequence-specific DNA binding by a two zinc-finger peptide from the Drosophila melanogaster Tramtrack protein. J. Mol. Biol. 226:1992;349-366.
-
(1992)
J. Mol. Biol.
, vol.226
, pp. 349-366
-
-
Fairall, L.1
Harrison, S.D.2
Travers, A.A.3
Rhodes, D.4
-
16
-
-
0029915311
-
Affinity selective isolation of ligands from peptide libraries through display on a lac repressor "headpiece dimer"
-
Gates C. M., Stemmer W. P. C., Kaptein R., Schatz P. J. Affinity selective isolation of ligands from peptide libraries through display on a lac repressor "headpiece dimer" J. Mol. Biol. 255:1996;373-386.
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 373-386
-
-
Gates, C.M.1
Stemmer, W.P.C.2
Kaptein, R.3
Schatz, P.J.4
-
17
-
-
0025310356
-
DNA recognition by proteins with the helix-turn-helix motif
-
Harrison S. C., Aggarwal A. K. DNA recognition by proteins with the helix-turn-helix motif. Annu. Rev. Biochem. 59:1990;933-969.
-
(1990)
Annu. Rev. Biochem.
, vol.59
, pp. 933-969
-
-
Harrison, S.C.1
Aggarwal, A.K.2
-
18
-
-
0023766789
-
A repressor heterodimer binds to a chimeric operator
-
Hollis M., Valenzula D., Pioli D., Wharton R., Ptashne M. A repressor heterodimer binds to a chimeric operator. Proc. Natl Acad. Sci. USA. 85:1988;5834-5838.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 5834-5838
-
-
Hollis, M.1
Valenzula, D.2
Pioli, D.3
Wharton, R.4
Ptashne, M.5
-
19
-
-
0029644725
-
Repressor fusions as a tool to study protein-protein interactions
-
Hu J. C. Repressor fusions as a tool to study protein-protein interactions. Structure. 3:1995;431-433.
-
(1995)
Structure
, vol.3
, pp. 431-433
-
-
Hu, J.C.1
-
20
-
-
0028222141
-
A permutational approach toward protein-DNA recognition
-
Hu L., Sera T., Schultz P. G. A permutational approach toward protein-DNA recognition. Proc. Natl Acad. Sci. USA. 91:1994;3969-3973.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 3969-3973
-
-
Hu, L.1
Sera, T.2
Schultz, P.G.3
-
21
-
-
0004198722
-
Protein engineering of antibody binding sites: Recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli
-
Huston J. S., Levinson D., Mudgett-Hunter M., Tai M.-S., Novotny J., Margolies M. N., Ridge R. J., Bruccoleri R. E., Haber E., Crea R., Opperman H. Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in Escherichia coli. Proc. Natl Acad. Sci. USA. 85:1988;5879-5883.
-
(1988)
Proc. Natl Acad. Sci. USA
, vol.85
, pp. 5879-5883
-
-
Huston, J.S.1
Levinson, D.2
Mudgett-Hunter, M.3
Tai, M.-S.4
Novotny, J.5
Margolies, M.N.6
Ridge, R.J.7
Bruccoleri, R.E.8
Haber, E.9
Crea, R.10
Opperman, H.11
-
23
-
-
0028227930
-
In vitro selection of zinc fingers with altered DNA-binding specificity
-
Jamieson A. C., Kim S.-H., Wells J. A. In vitro selection of zinc fingers with altered DNA-binding specificity. Biochemistry. 33:1994;5689-5695.
-
(1994)
Biochemistry
, vol.33
, pp. 5689-5695
-
-
Jamieson, A.C.1
Kim, S.-H.2
Wells, J.A.3
-
24
-
-
0007208716
-
Interaction between DNA-bound repressors govern regulation by the λ phage repressor
-
Johnson A. D., Meyer B. J., Ptashne M. Interaction between DNA-bound repressors govern regulation by the λ phage repressor. Proc. Natl Acad. Sci. USA. 76:1979;5061-5065.
-
(1979)
Proc. Natl Acad. Sci. USA
, vol.76
, pp. 5061-5065
-
-
Johnson, A.D.1
Meyer, B.J.2
Ptashne, M.3
-
25
-
-
0029153140
-
Operator binding by λ repressor heterodimers with one or two N-terminal arms
-
Kim Y.-I., Hu J. C. Operator binding by λ repressor heterodimers with one or two N-terminal arms. Proc. Natl Acad. Sci. USA. 92:1995;7510-7514.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 7510-7514
-
-
Kim, Y.-I.1
Hu, J.C.2
-
26
-
-
0027340392
-
R3 by bacteriophage 434 repressor and Cro
-
R3 by bacteriophage 434 repressor and Cro. J. Biol. Chem. 268:1993;23812-23817.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 23812-23817
-
-
Koudelka, G.B.1
Lam, C.-Y.2
-
27
-
-
0023613953
-
Rapid and efficient site specific mutagenesis without phenotypic selection
-
Kunkel T., Roberts J., Zakour R. Rapid and efficient site specific mutagenesis without phenotypic selection. Methods Enzymol. 154:1987;367-382.
-
(1987)
Methods Enzymol.
, vol.154
, pp. 367-382
-
-
Kunkel, T.1
Roberts, J.2
Zakour, R.3
-
28
-
-
0023432436
-
The interaction of the recognition helix of lac repressor with lac operator
-
Lehming N., Sartorius J., Niemöller M., Genenger G., von Wilcken-Bergmann B., Müller-Hill B. The interaction of the recognition helix of lac repressor with lac operator. EMBO J. 6:1987;3145-3153.
-
(1987)
EMBO J.
, vol.6
, pp. 3145-3153
-
-
Lehming, N.1
Sartorius, J.2
Niemöller, M.3
Genenger, G.4
Von Wilcken-Bergmann, B.5
Müller-Hill, B.6
-
29
-
-
0025780755
-
Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA
-
Luisi B. F., Xu W. X., Otwinowski Z., Freedman L. P., Yamamoto K. R., Siegler P. B. Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA. Nature. 352:1991;497-505.
-
(1991)
Nature
, vol.352
, pp. 497-505
-
-
Luisi, B.F.1
Xu, W.X.2
Otwinowski, Z.3
Freedman, L.P.4
Yamamoto, K.R.5
Siegler, P.B.6
-
30
-
-
0025499733
-
A family of expression vectors based on the rrnB P2 promoter of Escherichia coli
-
Lukacsovich T., Orosz A., Baliko G., Venetianer P. A family of expression vectors based on the rrnB P2 promoter of Escherichia coli. J. Biotechnol. 16:1990;49-56.
-
(1990)
J. Biotechnol.
, vol.16
, pp. 49-56
-
-
Lukacsovich, T.1
Orosz, A.2
Baliko, G.3
Venetianer, P.4
-
31
-
-
0018846636
-
Sequencing end-labeled DNA with base-specific chemical cleavages
-
Maxam A. M., Gilbert W. Sequencing end-labeled DNA with base-specific chemical cleavages. Methods Enzymol. 65:1980;499-560.
-
(1980)
Methods Enzymol.
, vol.65
, pp. 499-560
-
-
Maxam, A.M.1
Gilbert, W.2
-
32
-
-
0003785155
-
-
Cold Spring Harbor: Cold Spring Harbor Laboratory Press
-
Miller J. H. Experiments in Molecular Genetics. 1972;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
33
-
-
0021767948
-
Specificity of mutations induced in transfected DNA by mammalian cells
-
Miller J. H., Lebkowski J. S., Greisen K. S., Calos M. P. Specificity of mutations induced in transfected DNA by mammalian cells. EMBO J. 3:1984;3117-3121.
-
(1984)
EMBO J.
, vol.3
, pp. 3117-3121
-
-
Miller, J.H.1
Lebkowski, J.S.2
Greisen, K.S.3
Calos, M.P.4
-
34
-
-
0026349170
-
A streptomycin selection for DNA-binding activity
-
Mossing M. C., Bowie J. U., Sauer R. T. A streptomycin selection for DNA-binding activity. Methods Enzymol. 208:1991;604-619.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 604-619
-
-
Mossing, M.C.1
Bowie, J.U.2
Sauer, R.T.3
-
35
-
-
0021683036
-
The construction of a versatile plasmid vector that allows direct selection of fragments cloned into six unique sites of the c I gene of coliphage 434
-
Nikolnikov S., Pósfai G., Sain B. The construction of a versatile plasmid vector that allows direct selection of fragments cloned into six unique sites of the c I gene of coliphage 434. Gene. 30:1984;261-265.
-
(1984)
Gene
, vol.30
, pp. 261-265
-
-
Nikolnikov, S.1
Pósfai, G.2
Sain, B.3
-
36
-
-
0026682657
-
Transcription factors: Structural families and principles of DNA recognition
-
Pabo C. O., Sauer R. T. Transcription factors: structural families and principles of DNA recognition. Annu. Rev. Biochem. 61:1992;1053-1095.
-
(1992)
Annu. Rev. Biochem.
, vol.61
, pp. 1053-1095
-
-
Pabo, C.O.1
Sauer, R.T.2
-
37
-
-
0029026712
-
Rationally designed helix-turn-helix proteins and their conformational changes upon DNA binding
-
Percipalle P., Simoncsits A., Zakhariev S., Guarnaccia C., Sanchez R., Pongor S. Rationally designed helix-turn-helix proteins and their conformational changes upon DNA binding. EMBO J. 14:1995a;3200-3205.
-
(1995)
EMBO J.
, vol.14
, pp. 3200-3205
-
-
Percipalle, P.1
Simoncsits, A.2
Zakhariev, S.3
Guarnaccia, C.4
Sanchez, R.5
Pongor, S.6
-
38
-
-
85030300084
-
Synthetic dimeric peptides based on the phage 434 c I repressor
-
H.L.S. Maia. ESCOM
-
Percipalle P., Zakhariev S., Tossi A., Guarnaccia C., Cserzö M., Simoncsits A., Pongor S. Synthetic dimeric peptides based on the phage 434 c I repressor. Maia H. L. S. Peptides ′94. 1995b;ESCOM.
-
(1995)
Peptides ′94
-
-
Percipalle, P.1
Zakhariev, S.2
Tossi, A.3
Guarnaccia, C.4
Cserzö, M.5
Simoncsits, A.6
Pongor, S.7
-
39
-
-
0028948325
-
Structure-based design of transcription factors
-
Pomerantz J. L., Sharp P. A., Pabo C. O. Structure-based design of transcription factors. Science. 267:1995;93-96.
-
(1995)
Science
, vol.267
, pp. 93-96
-
-
Pomerantz, J.L.1
Sharp, P.A.2
Pabo, C.O.3
-
41
-
-
0004194541
-
-
Cambridge: Cell Press and Blackwell Scientific Publications
-
Ptashne M. A Genetic Switch. 1992;Cell Press and Blackwell Scientific Publications, Cambridge.
-
(1992)
A Genetic Switch
-
-
Ptashne, M.1
-
42
-
-
0028328872
-
Zinc finger phage: Affinity selection of fingers with new DNA-binding specificities
-
Rebar E. J., Pabo C. O. Zinc finger phage: affinity selection of fingers with new DNA-binding specificities. Science. 263:1994;671-673.
-
(1994)
Science
, vol.263
, pp. 671-673
-
-
Rebar, E.J.1
Pabo, C.O.2
-
44
-
-
0029671279
-
Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA
-
Robinson C. R., Sauer R. T. Covalent attachment of Arc repressor subunits by a peptide linker enhances affinity for operator DNA. Biochemistry. 35:1996;109-116.
-
(1996)
Biochemistry
, vol.35
, pp. 109-116
-
-
Robinson, C.R.1
Sauer, R.T.2
-
47
-
-
0018386029
-
Regulatory functions of λ repressor reside in the amino-terminal domain
-
Sauer R. T., Pabo C. O., Meyer B. J., Ptashne M., Backman K. D. Regulatory functions of λ repressor reside in the amino-terminal domain. Nature. 279:1979;396-400.
-
(1979)
Nature
, vol.279
, pp. 396-400
-
-
Sauer, R.T.1
Pabo, C.O.2
Meyer, B.J.3
Ptashne, M.4
Backman, K.D.5
-
48
-
-
0027410046
-
The pRSET family of T7 promoter expression vectors for Escherichia coli
-
Schoepfer R. The pRSET family of T7 promoter expression vectors for Escherichia coli. Gene. 124:1993;83-85.
-
(1993)
Gene
, vol.124
, pp. 83-85
-
-
Schoepfer, R.1
-
49
-
-
0024217479
-
Synthesis, cloning and expression in Escherichia coli of artificial genes coding for biologically active elongated precursors of the vasoactive intestinal polypeptide
-
Simoncsits A., Tjörnhammar M. L., Kálmán M., Cserpán I., Gafvelin G., Bartfai T. Synthesis, cloning and expression in Escherichia coli of artificial genes coding for biologically active elongated precursors of the vasoactive intestinal polypeptide. Eur. J. Biochem. 178:1988;343-350.
-
(1988)
Eur. J. Biochem.
, vol.178
, pp. 343-350
-
-
Simoncsits, A.1
Tjörnhammar, M.L.2
Kálmán, M.3
Cserpán, I.4
Gafvelin, G.5
Bartfai, T.6
-
50
-
-
0028085946
-
Deletion mutants of human interleukin 1β with significantly reduced agonist properties: Search for agonist/antagonist switch in ligands to the interleukin 1 receptors
-
Simoncsits A., Bristulf J., Tjörnhammar M. L., Cserzö M., Pongor S., Rybakina E., Gatti S., Bartfai T. Deletion mutants of human interleukin 1β with significantly reduced agonist properties: search for agonist/antagonist switch in ligands to the interleukin 1 receptors. Cytokine. 6:1994;206-214.
-
(1994)
Cytokine
, vol.6
, pp. 206-214
-
-
Simoncsits, A.1
Bristulf, J.2
Tjörnhammar, M.L.3
Cserzö, M.4
Pongor, S.5
Rybakina, E.6
Gatti, S.7
Bartfai, T.8
-
52
-
-
0026289219
-
Direct selection vectors, promoter-active adaptors and their use for gene assembly by a single-stranded cloning method
-
Tjörnhammar M. L., Simoncsits A. Direct selection vectors, promoter-active adaptors and their use for gene assembly by a single-stranded cloning method. Nucl. Acids Res. Symp. Series. 24:1991;252.
-
(1991)
Nucl. Acids Res. Symp. Series
, vol.24
, pp. 252
-
-
Tjörnhammar, M.L.1
Simoncsits, A.2
-
53
-
-
0014202305
-
Characterization by in vitro complementation of a peptide corresponding to an operator-proximal segment of the β-galactosidase structural gene of Escherichia coli
-
Ullmann A., Jacob F., Monod J. Characterization by in vitro complementation of a peptide corresponding to an operator-proximal segment of the β-galactosidase structural gene of Escherichia coli. J. Mol. Biol. 24:1967;339-343.
-
(1967)
J. Mol. Biol.
, vol.24
, pp. 339-343
-
-
Ullmann, A.1
Jacob, F.2
Monod, J.3
-
54
-
-
0026567576
-
Efficient repression by a heterodimeric repressor in Escherichia coli
-
Webster C., Merryweather A., Brammar W. Efficient repression by a heterodimeric repressor in Escherichia coli. Mol. Microbiol. 6:1992;371-377.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 371-377
-
-
Webster, C.1
Merryweather, A.2
Brammar, W.3
-
55
-
-
0022386929
-
Changing the binding specificity of a repressor by redesigning an α-helix
-
Wharton R. P., Ptashne M. Changing the binding specificity of a repressor by redesigning an α-helix. Nature. 316:1985;601-605.
-
(1985)
Nature
, vol.316
, pp. 601-605
-
-
Wharton, R.P.1
Ptashne, M.2
-
56
-
-
0023240206
-
A new specificity mutant of 434 repressor that defines an amino acid-base pair contact
-
Wharton R. P., Ptashne M. A new specificity mutant of 434 repressor that defines an amino acid-base pair contact. Nature. 326:1987;888-891.
-
(1987)
Nature
, vol.326
, pp. 888-891
-
-
Wharton, R.P.1
Ptashne, M.2
-
57
-
-
0021130173
-
Substituting an α-helix switches the sequence-specific DNA interactions of a repressor
-
Wharton R. P., Brown E. L., Ptashne M. Substituting an α-helix switches the sequence-specific DNA interactions of a repressor. Cell. 38:1984;361-369.
-
(1984)
Cell
, vol.38
, pp. 361-369
-
-
Wharton, R.P.1
Brown, E.L.2
Ptashne, M.3
-
58
-
-
0029101879
-
Linkage of protein assembly to protein-DNA binding
-
Wong I., Lohman T. M. Linkage of protein assembly to protein-DNA binding. Methods Enzymol. 259:1995;95-127.
-
(1995)
Methods Enzymol.
, vol.259
, pp. 95-127
-
-
Wong, I.1
Lohman, T.M.2
-
59
-
-
0028888530
-
Building zinc fingers by selection: Toward a therapeutic application
-
Wu H., Yang W.-P., Barbas C. F., III. Building zinc fingers by selection: toward a therapeutic application. Proc. Natl Acad. Sci. USA. 92:1995;344-348.
-
(1995)
Proc. Natl Acad. Sci. USA
, vol.92
, pp. 344-348
-
-
Wu, H.1
Yang, W.-P.2
Barbas C.F. III3
-
60
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
-
Yanisch-Perron C., Vieira J., Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 33:1985;103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
|