Genetic mapping of 21 genes on mouse chromosome 11 reveals disruptions in linkage conservation with human chromosome 5

Genomics

Volumn 40, Issue 1, 1997, Pages 114-122

  Watkins Chow, Dawn E ^a   Buckwalter, Marion S ^a   Newhouse, Matthew M ^a   Lossie, Amy C ^a   Brinkmeier, Michelle L ^a   Camper, Sally A ^a  

^a UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ARTICLE; CHROMOSOME 11; CHROMOSOME 13; CHROMOSOME 18; CHROMOSOME 5; GENE MAPPING; GENE ORDER; GENETIC DISTANCE; GENETIC LINKAGE; GENOME; HUMAN; HUMAN CELL; MOUSE; NONHUMAN; PRIORITY JOURNAL; RAT; SEQUENCE HOMOLOGY; SPECIES DIFFERENCE;

ANIMALIA; MAMMALIA;

EID: 0031568899     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1996.4532     Document Type: Article

References (55)

1. Archibald, A. L., Haley, C. S., Brown, J. F., Couperwhite, S., McQueen, H.A., Nicholson, D., Coppieters, W., Weghe, A.V. d., Stratil, A., Winters, A. K., et al. (1995). The PiGMaP consortium linkage map of the pig (Sus scrofa). Mamm. Genome 6: 157-175.
2. Bishop, M. D., Kappes, S. M., Keele, J. W., Stone, R. T., Sunden, S. L., Hawkins, G. A., Toldo, S. S., Fries, R., Grosz, M. D., Yoo, J., et al. (1994). A genetic linkage map for cattle. Genetics 136: 619-639.
3. Buchberg, A. M., Brownell, E., Nagata, S., Jenkins, N. A., and Copeland, N. G. (1989). A comprehensive genetic map of murine chromosome 11 reveals extensive linkage conservation between mouse and human. Genetics 8: 153-161.
4. Buckwalter, M. S., Katz, R. W., and Camper, S. A. (1991). Localization of the panhypopituitary dwarf mutation (df) on mouse chromosome 11 in an intersubspecific backcross. Genomics 10: 515-526.
5. Buckwalter, M. S., Lossie, A. C., Scarlett, L. M., and Camper, S. A. (1992). Localization of the human chromosome 5q genes Gabra-1, Gabrg-2, Il-4, Il-5 and Irf-1 on mouse chromosome 11. Mamm. Genome 3: 604-607.
6. Buckwalter, M. S., Testa, C. M., Noebels, J. N., and Camper, S. A. (1993). Genetic mapping and evaluation of candidate genes for spasmodic, a neurological mouse mutation with abnormal startle response. Genomics 17: 279-286.
7. Chowdhary, B. P., Fronicke, L., Gustavsson, I., and Scherthan, H. (1996). Comparative analysis of the cattle and human genomes: Detection of ZOO-FISH and gene mapping-based chromosomal homologies. Mamm. Genome 7: 297-302.
8. Colombo, M. P., Martinotti, A., Howard, T. A., Schneider, C., D'Eustachio, P., and Seldin, M. F. (1992). Localization of growth arrest-specific genes on mouse chromosomes 1, 7, 8, 11, 13, and 16. Mamm. Genome 2: 130-134.
9. Copeland, N. G., Jenkins, N. A., Gilbert, D. J., Eppig, J. T., Maltais, L. J., Miller, J. C., Dietrich, W. F., Weaver, A., Lincoln, S. E., Steen, R. G., Nadeau, J. H., and Lander, E. S. (1993). A genetic linkage map of the mouse: Current applications and future prospects. Science 262: 57-66.
10. Crawford, A. M., Dodds, K. G., Ede, A. J., Pierson, C. A., Montgomery, G. W., Garmonsway, H. G., Beattie, A. E., Davies, K., Maddox, J. F., Kappes, S. W., et al. (1995). An autosomal genetic linkage map of the sheep genome. Genetics 140: 703-724.
11. DeBry, R. W., and Seldin, M. F. (1996). Human/mouse homology relationships. Genomics 33: 337-351.
12. Deisseroth, A., Nienhuis, A., Turner, P., Velez, R., Anderson, W., Ruddle, F., Lawrence, J., Creagan, R., and Kucherlapati, R. (1977). Localization of the human alpha-globin structural gene to chromosome 16 in somatic cell hybrids by molecular hybridization assay. Cell 12: 205-218.
13. Dib, C., Faure, S., Fizames, C., Samson, D., Drouot, N., Vignal, A., Millasseau, P., Marc, S., Kazan, J., Seboun, E., Lathrop, M., Gyapay, G., Morissette, J., and Weissenbach, J. (1996). A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380: 152-154.
14. Dietrich, W. F., Miller, J., Steen, R., Merchant, M. A., Damron-Boles, D., Husain, Z., Dredge, R., Daly, M. J., Ingalls, K. A., O'Connor, T. J., Evans, C. A., DeAngelis, M. M., Levinson, D. M., Kruglyak, L., Goodman, N., Copeland, N. G., Jenkins, N. A., Hawkins, T. L., Stein, L., Page, D. C., and Lander, E. S. (1996). A comprehensive genetic map of the mouse genome. Nature 380: 149-152.
15. Epstein, D. J., Vekemans, M., and Gros, P. (1991). Splotch (Sp2H), a mutation affecting development of the mouse neural tube, shows a deletion within the paired homeodomain of Pax-3. Cell 67: 767-774.
16. Friedman, J. M., Leibel, R. L., and Bahary, N. (1991). Molecular mapping of obesity genes. Mamm. Genome 1: 130-144.
17. Friedman, T. B., Liang, Y., Weber, J. L., Hinnant, J. T., Barber, T. D., Winata, S., Arhya, I. N., and Asher, J. H. J. (1995). A gene for congenital, recessive deafness DFNB3 maps to the pericentromeric region of chromosome 17. Nature Genet. 9: 86-91.
18. Galland, F., Karamysheva, A., Mattei, M. G., Rosnet, O., Marchetto, S., and Birnbaum, D. (1992). Chromosomal localization of FLT4, a novel receptor-type tyrosine kinase gene. Genomics 13: 475-478.
19. Genome Database Version 6.0 (1996). Hosted by Johns Hopkins University School of Medicine, Baltimore, MD. Available http:// gdbwww.gdb.org/.
20. Greco, T. L., Takada, S., Newhouse, M. M., McMahon, J. A., McMahon, A. P., and Camper, S. A. (1996). Analysis of the vestigial tail mutation demonstrates that Wnt-3a gene dosage regulates mouse axial development. Genes Dev. 10: 313-324.
21. Hatada, I., Sugama, T., and Mukai, T. (1993). A new imprinted gene cloned by a methylation-sensitive genome scanning method. Nucleic Acids Res. 21: 5577-5582.
22. Janis, E. M., Siliciano, J. D., Isaac, D. D., Griffin, C. A., Hawkins, A. L., Kozak, C. A., and Desiderio, S. (1994). Mapping of the gene for the tyrosine kinase Itk to a region of conserved synteny between mouse chromosome 11 and human chromosome 5q. Genomics 23: 269-271.
23. Kalcheva, I., Plass, C., Sait, S., Eddy, R., Shows, T., Watkins-Chow, D., Camper, S., Shibata, H., Ueda, T., Takagi, N., Hayashizaki, Y., and Chapman, V. (1995). Comparative mapping of the imprinted U2afbpL gene on mouse chromosome 11 and human chromosome 5. Cytogenet. Cell Genet. 68: 19-24.
24. Kingsmore, S. F., Watson, M. L., and Seldin, M. F. (1995). Genetic mapping of the T lymphocyte-specific transcription factor 7 gene on mouse Chromosome 11. Mamm. Genome 6: 378.
25. Leon, P. E., Raventos, H., Lynch, E., Morrow, J., and King, M.-C. (1992). The gene for an inherited form of deafness maps to chromosome 5q31. Proc. Natl Acad. Sci. USA 89: 5181-5184.
26. McPherron, A. C., and Lee, S. J. (1993). GDF-3 and GDF-9: Two new members of the transforming growth factor-beta superfamily containing a novel pattern of cysteines. J. Biol. Chem. 268: 3444-34449.
27. Milatovich, A., Qui, R.-G., Grosschedl, R., and Francke, U. (1994). Gene for a tissue-specific transcriptional activator (EBF or Olf-1), expressed in early B lymphocytes, adipocytes, and olfactory neurons, is located on human chromosome 5, band q34, and proximal mouse chromosome 11. Mamm. Genome 5: 211-215.
28. Mouse Genome Database Version 3.1 (1996). Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME. Available http://www.informatics.jax.org/.
29. Nadeau, J. H., Davisson, M. T., Doolittle, D. P., Grant, P., Hillyard, A. L., Kosowsky, M. R., and Roderick, T. H. (1992). Comparative map for mice and humans. Mamm. Genome 3: 480-536.
30. Oakey, R. J., Caron, M. G., Lefkowitz, R. J., and Seldin, M. F. (1991). Genomic organization of the adrenergic and serotonin receptors in the mouse: Linkage mapping of sequence-related genes provides a method for examining mammalian chromosome evolution. Genomics 10: 338-344.
31. Oakey, R., Watson, M. L., and Seldin, M. F. (1992). Construction of a physical map on mouse and human chromosome 1: Comparison of 13 Mb of mouse and 11 Mb of human DNA. Hum. Mol. Genet. 1: 613-620.
32. O'Brien, S. J., Womack, J. E., Lyons, L. A., Moore, K. J., Jenkins, N. A., and Copeland, N. G. (1993). Anchored reference loci for comparative genome mapping in mammals. Nature Genet. 3: 103-112.
33. Oosterwegel, M., Wetering, M. v. d., Dooijes, D., Klomp, L., Winoto, A., Georgopoulos, K., Meijlink, F., and Clevers, H. (1991). Cloning of murine TCF-1, a T cell-specific transcription factor interacting with functional motifs in the CD3-Πand T cell receptor a enhancers. J. Exp. Med. 173: 1133-1142.
34. Patel, P. I., Roa, B. B., Welcher, A. A., Schoener-Scott, R., Trask, B. J., Pentao, L., Snipes, G. J., Garcia, C. A., Francke, U., Shooter, E. M., Lupski, J. R., and Suter, U. (1992). The gene for the peripheral myelin protein PMP-22 is a candidate for Charcot-Marie-Tooth disease type 1A. Nature Genet. 1: 159-165.
35. Pilz, A., Prohaska, R., Peters, J., and Abbott, C. (1994). Genetic linkage analysis of the Ak1, Col5a1, Epb7.2, Fpgs, Grp78, Pbx3, and Notch1 genes in the region of mouse chromosome 2 homologous to human chromosome 9q. Genomics 21: 104-109.
36. Pownall, S., Kozak, C. A., Schappert, K., Sarkar, M., Hull, E., Schachter, H., and Marth, J. D. (1992). Molecular cloning and characterization of the mouse UDP-N-acetylglucosamine:α-3-D-mannoside β-1,2-N-acetylglucosaminyltransferase I gene. Genomics 12: 699-704.
37. Reeves, R. H., Crowley, M. R., O'Hara, B. F., and Gearhart, J. D. (1990). Sex, strain and species differences affect recombination across an evolutionarily conserved segment of mouse chromosome 16. Genomics 8: 141-148.
38. Roelink, H., and Nusse, R. (1991). Expression of two members of the Wnt family during mouse development - Restricted temporal and spatial patterns in the developing neural tube. Genes Dev. 5: 381-388.
39. Rowe, L. B., Nadeau, J. H., Turner, R., Frankel, W. N., Letts, V. A., Eppig, J. T., Ko, M. S. H., Thurston, S. J., and Birkenmeier, E. H. (1994). Maps from two interspecific backcross DNA panels available as a community genetic mapping resource. Mamm. Genome 5: 253-274.
40. Ryan, S. G., Buckwalter, M. S., Lynch, J. W., Handford, C. A., Segura, L., Shiang, R., Wasmuth, J. J., Camper, S. A., Schofield, P., and O'Connell, P. (1994). A missense mutation in the gene encoding the α1 subunit of the inhibitory glycine receptor in the spasmodic mouse. Nature Genet. 7: 131-135.
41. Ryan, S. G., Sherman, S. L., Terry, J. C., Sparkes, R. S., Torres, M. C., and Mackey, R. W. (1992). Startle disease, or hyperekplexia: Response to clonazepam and assignment of the gene (STHE) to chromosome 5q by linkage analysis. Ann. Neurol. 31: 663-668.
42. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). "Molecular Cloning: A Laboratory Manual," Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
43. Schaible, R., and Gowen, J. W. (1961). A new dwarf mouse. Genetics 46: 896.
44. Shibata, H. (1995). Electrophoresis 16: 210-217.
45. Siliciano, J. D., Morrow, T. A., and Desiderio, S. V. (1992). Itk, a T cell-specific tyrosine kinase gene inducible by interleukin-2. Proc. Natl. Acad. Sci. USA 89: 11194-11198.
46. Solinas-Toldo, S., Lengauer, C., and Fries, R. (1995). Comparative genome map of human and cattle. Genomics 27: 489-496.
47. Suter, U., Welcher, A. A., Özcelik, T., Snipes, G. J., Kosaras, B., Francke, U., Billings-Gagliardi, S., Sidman, R. L., and Shooter, E. M. (1992). Trembler mouse carries a point mutation in a myelin gene. Nature 356: 241-243.
48. Tassabehji, M., Read, A. P., Newton, V. E., Harris, R., Balling, R., Gruss, P., and Strachan, T. (1992). Waardenburg's syndrome patients have mutations in the human homologue of the Pax-3 paired box gene. Nature 355: 635-636.
49. Valentijn, L. J., Baas, F., Wolterman, R. A., Hoogendijk, J. E., van den Bosch, N. H., Zorn, I., Gabreels-Festen, A. W., de Visser, M., and Bolhuis, P. A. (1992). Identical point mutations of PMP-22 in Trembler-J mouse and Charcot-Marie-Tooth disease type 1A. Nature Genet. 2: 288-291.
50. Warrington, J. A., and Bengtsson, U. (1994). High-resolution physical mapping of human 5q31-q33 using three methods: Radiation hybrid mapping, interphase fluorescence in situ hybridization, and pulsed-field gel electrophoresis. Genomics 24: 295-398.
51. Watkins-Chow, D., Roller, M., Newhouse, M. M., Buchberg, A. M., and Camper, S. A. (1996). Mouse chromosome 11. Mamm. Genome 6: S201-S220.
52. Westbrook, C., Neuman, W., McPherson, J., Camper, S., Wasmuth, J., Platke, R., and Williamson, R. (1992). Report of the second international workshop on human chromosome 5 mapping. Cytogenet. Cell Genet. 61: 226-230.
53. Yamada, J., Kuramoto, T., and Serikawa, T. (1994). A rat genetic linkage map and comparative maps for mouse or human homologous rat genes. Mamm. Genome 5: 63-83.
54. Yang, Y.-P., and Womack, J. E. (1995). Human chromosome 17 comparative anchor loci are conserved on bovine chromosome 19. Genomics 27: 293-297.
55. Zhang, N., and Womack, J. E. (1992). Synteny mapping in the bovine: Genes from human chromosome 5. Genomics 14: 126-130.