The antiterminator RNA of phage HK022

Journal of Molecular Biology

Volumn 272, Issue 5, 1997, Pages 677-687

  Banik Maiti, Sarbani ^a,b   King, Rodney A ^a   Weisberg, Robert A ^a  

^a EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH AND HUMAN DEVELOPMENT   (United States)

^b VANDERBILT UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Bacteriophage HK022; Regulatory RNA; RNA polymerase; Transcription termination; Transcriptional regulatory elements

Indexed keywords

VIRUS RNA;

ARTICLE; BACTERIOPHAGE; CONTROLLED STUDY; GENE MUTATION; NONHUMAN; PRIORITY JOURNAL; RNA STRUCTURE; TRANSCRIPTION TERMINATION; VIRUS GENE; VIRUS TRANSCRIPTION;

EID: 0031563808     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.1997.1251     Document Type: Article

References (15)

1. Baron J., Weisberg R. A. Mutations of the phage lambda nutL region that prevent the action of Nun, a site-specific transcription termination factor. J. Bacteriol. 174:1992;1983-1989.
2. Battiste J. L., Mao H., Rao N. S., Tan R., Muhandiram D. R., Kay L. E., Frankel A. D., Williamson J. R. Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex. Science. 273:1996;1547-1551.
3. Clerget M., Jin D. J., Weisberg R. A. A zinc binding region in the β′ subunit of RNA polymerase is involved in antitermination of early transcription of phage HK022. J. Mol. Biol. 248:1995;768-780.
4. Gottesman M. E., Weisberg R. A. Recent Developments in Bacteriophage Virology. 1995.
5. Ho S. N., Hunt H. D., Horton R. M., Pullen J. K., Pease L. R. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene. 77:1989;51-59.
6. Jaeger J. A., Turner D. H., Zuker M. Predicting optimal and suboptimal secondary structure for RNA. Methods Enzymol. 183:1990;281-306.
7. King R. A., Banik-Maiti S., Jin D. J., Weisberg R. A. Transcripts that increase the processivity and elongation rate of RNA polymerase. Cell. 87:1996;893-903.
8. Kunkel T. A., Bebenek K., McClary J. Efficient site-directed mutagenesis using uracil-containing DNA. Methods Enzymol. 204:1991;125-139.
9. Leung D. W., Ellison C., Goeddel D. V. A method for random mutagenesis of a defined DNA segment using a modified polymerase chain reaction. Technique. 1:1989;11-15.
10. Lowman H. B., Draper D. E. On the recognition of helical RNA by cobra venom V1 nuclease. J. Biol. Chem. 261:1986;5396-5403.
11. Menzel R. A microtiter plate-based system for the semiautomated growth and assay of bacterial cells for beta-galactosidase activity. Anal. Biochem. 181:1989;40-50.
12. Oberto J., Clerget M., Ditto M., Cam K., Weisberg R. A. Antitermination of early transcription in phage HK022. Absence of a phage-encoded antitermination factor. J. Mol. Biol. 229:1993;368-381.
13. Richardson J. P., Greenblatt J. Curtiss R. C. I. I. I., Lin E. C. C., Low K. B., Magasanik B., Neidhardt F. C., Reznikoff W. S., Riley M., Schaechter M., Umbarger H. E. Escherichia coli and Salmonella: Cellular and Molecular Biology. 1996;ASM Press, Washington.
14. Silhavy T. J., Berman M. L., Enquist L. W. Experiments with Gene Fusions. 1984;Cold Spring Harbor Laboratory Press, Cold Spring Harbor.
15. Simons R. W., Houman F., Kleckner N. Improved single and multicopy lac-based cloning vectors for protein and operon fusions. Gene. 53:1987;85-96.