Analysis of TCRAV and TCRBV repertoires in healthy individuals by microplate hybridization assay

Human Immunology

Volumn 56, Issue 1-2, 1997, Pages 57-69

  Matsutani, Takaji ^a   Yoshioka, Takeshi ^a   Tsuruta, Yuji ^a   Iwagami, Shoji ^a   Suzuki, Ryuji ^a  

^a SHIONOGI AND CO LTD   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

OLIGONUCLEOTIDE; RNA; T LYMPHOCYTE RECEPTOR ALPHA CHAIN; T LYMPHOCYTE RECEPTOR BETA CHAIN;

ARTICLE; BIOTINYLATION; CONTROLLED STUDY; DNA POLYMORPHISM; DOT HYBRIDIZATION; ENZYME LINKED IMMUNOSORBENT ASSAY; FLUORESCENCE ACTIVATED CELL SORTER; HLA SYSTEM; HUMAN; HUMAN CELL; MONONUCLEAR CELL; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REPRODUCIBILITY; T LYMPHOCYTE;

FLOW CYTOMETRY; HUMANS; IMMUNOBLOTTING; IMMUNOGLOBULIN VARIABLE REGION; IN SITU HYBRIDIZATION; OLIGONUCLEOTIDE PROBES; OLIGONUCLEOTIDES; POLYMORPHISM, GENETIC; RECEPTORS, ANTIGEN, T-CELL, ALPHA-BETA;

EID: 0031473166     PISSN: 01988859     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0198-8859(97)00102-X     Document Type: Article

References (32)

1. Davis MM, Bjorkman PK. T-cell antigen receptor genes and T-cell recognition. Nature. 334:1988;395.
2. Wilson RK, Lai E, Concannon P, Barth RK, Hood LE. Structure, organization and polymorphism of murine and human T-cell receptor α and β chain gene family. Immunol Rev. 101:1988;149.
3. Jenkins RN, Nikaein A, Zimmermann A, Meek K, Lipsky PE. T cell receptor Vb gene bias in rheumatoid synovial fluid T lymphocytes. Clin Exp Immunol. 92:1993;2688.
4. Plushke G, Ricken G, Taube S, Kroninger S, Melchers I, Peter H, Eickmann K, Krawinkel U. Biased T cell receptor V region repertoire in the synovial fluid of rheumatoid arthrist patients. Eur J Immunol. 21:1991;2749.
5. Ben-nun A, Liblau RS, Cohen L, Lehmann D, Tournier-lasserve A, Rosenzweig A, Zhang J, Raus JCM, Bath M-A. Restricted T-cell receptor Vb gene usage by myelin basic protein-specific T-cell clones in multiple sclerosis Predominant genes vary in individuals . Proc Natl Acad Sci USA. 88:1991;2466.
6. O'hanlon TP, Dalakas MC, Plotz PH, Miller FW. Predominant TCR-ab variable and joining gene expression by muscle-infiltrating lymphocytes in the idiopathic inflammatory myopathies. J Immunol. 152:1994;2569.
7. Tsuruta Y, Yoshioka T, Suzuki R, Sakata T. Analysis of the population of human T cell receptor g and d chain variable region subfamilies by reverse dot blot hybridization. J Immunol Methods. 169:1994;17.
8. Matsutani T, Oishi C, Kaneshige T, Igimi H, Uchida K, Tsuruta Y, Yoshioka T, Suzuki R, Sakata T. Molecular analysis of T-cell receptor Vβ chain to detect leukemia cell clonality in patients by adaptor ligation-mediated polymerase chain reaction. J Immunol Methods. 177:1994;9.
9. Yoshioka T, Matsutani T, Iwagami S, Tsuruta Y, Kaneshige T, Toyosaki T, Suzuki R. Quantitative analysis of the usage of human T cell receptor α and β chain variable regions by reverse dot blot hybridization. J Immunol Methods. 201:1997;145.
10. Kostyu DD, Pfohl J, Ward FE, Lee J, Murray A, Amos DB. Rapid HLA-DR oligotyping by an enzyme-linked immunosorbent assay performed in microtiter trays. Human Immunol. 38:1993;148.
11. NagataY Yokota H, Kusuda O, Yokoo K, Takemura K, Kikuchi T. Quantification of picogram levels of specific DNA immobilized in microtiter wells. FEMS LETTERS. 183:1985;379.
12. Varga JM, Fretsch P. Immobilization of small molecules and proteins by radio-derivatized polystyrene. The FASEB Journal. 4:1990;2671.
13. Larsson PH, Johansson SGO, Hult A, Gothe S. Covalent binding of proteins to grafted plastic surfaces suitable for immunoassays. J Immunol Methods. 98:1987;129.
14. Staros JV, Wright RW, Swingle DM. Enhancement by N-hydroxysulfosuccinimide of water-soluble carbodiimide-mediated coupling reactions. Analytical Biochemistry. 156:1986;220.
15. Rasmussen SE. Covalent immobilization of biomolecules onto polystyrene microwells for use in biospecific assays. Ann Biol Clin. 48:1990;647.
16. Rasmussen SR, Larsen MR, Raumussen SE. Covalent immobilization of DNA onto polystyrene microwells The molecules are only bound at the 5′ end . Analytical Biochemistry. 198:1991;138.
17. Tung CH, Rudolph MJ, Stein S. Preparation of oligonucleotide-peptide conjugates. Bioconjugate Chem. 2:1991;464.
18. Tsuruta Y, Iwagami S, Furue S, Teraoka H, Yoshida T, Sakata T, Suzuki R. Detection of human T cell receptor cDNA (α, β, γ, and δ) by ligation of a universal adaptor to various region. J Immunol Methods. 161:1993;7.
19. Chomczynski P, Sacchi N. Single-step method of RNA isolated by acid guanidium-thiocyanate-phenol-chloroform extraction. Anal Biochem. 162:1987;156.
20. Choi Y, Kotzin B, Herron L, Callahan P, Marrack P, Kapper J. Interaction of Staphylococcus aureus toxin "superantigen" with human T-cells. Proc Natl Acad Sci USA. 86:1989;8941.
21. Diu A, Romagne F, Genevee C, Rocher C, Bruneau JM, David A, Praz F, Hercend T. Fine specificity of monoclonal antibodies directed at human T cell receptor variable regions comparison with oligonucleotide-deriven amplification for evaluation of Vβ expression . Eur J Immunol. 23:1993;1422.
22. Loh EY, Elliot JF, Cwirla S, Lanier LL, Davis MM. Polymerase chain reaction with single-sided specificity Analysis of T cell receptor γ chain . Science. 243:1989;217.
23. Roman-Roman S, Ferradini L, Azocar J, Genevee C, Hercevd T, Triebel F. Studies on the human T cell receptor α/β variable region genes I. Identification of 7 additional Vα subfamilies and 14 Ja gene segments . Eur J Immunol. 21:1991;927.
24. Uematsu Y, Wege H, Straus A, Ott M, Bannwarth W, Lanchbury J, Panayi G, Steinmetz M. The T-cell receptor repertoire in synovial fluid of a patient with rheumatoid arthritis is polyclonal. Proc Natl Acad Sci USA. 88:1991;8534.
25. Malhotra U, Spielman R, Concannon P. Variability in T cell receptor V-beta gene usage in human peripheral blood lymphocytes Studies of identical twins, siblings, and insulin-dependent diabetes mellitus patients . J Immunol. 149:1992;1802.
26. Alokor PN, Gulwani-Alokar B, Pergolizzi R, Bigler RD, Silver J. Influence of HLA genes on T cell receptor V segment frequencies and expression levels in peripheral blood lymphocytes. J Immunol. 150:1993;2761.
27. Charmley P, Concannon P. PCR-based genotyping and haplotype analysis of human TCRBV gene segment polymorphisms. Immunogenetics. 42:1995;254.
28. Vissinga CS, Charmley P, Concannon P. Influence of coding region polymorphism on the peripheral expression of human TCR Vβ gene. J Immunol. 152:1992;1222.
29. Posnett DN, Vissinga CS, Pambuccian C, Wei S, Robinson MA, Kostyu D, Concannon P. Level of human TCRBV3S1 (Vβ3) expression correlates with allelic polymorphism in spacer region of recombination signal sequence. J Exp Med. 179:1994;1701.
30. Donahue JP, Ricalton NS, Behrendt CE, Ritterhaus C, Calaman S, Marrack P, Kappler JW, Kotzin BL. Genetic analysis of low Vβ3 expression in humans. J Exp Med. 179:1994;1701.
31. Concannon P, Robinson MA. Human T-cell receptor gene nomenclature. Ann NY Acad Sci. 756:1995;124.
32. Wei S, Charmley P, Robinson MA, Concannon P. The extent of the human germline T-cell receptor V beta gene segment repertoire. Immunogenetics. 40:1994;27.