Organization, sequence, and expression of the gene encoding IGFII from barramundi (teleosteii; Lates calcarifer)

Biochemical Genetics

Volumn 35, Issue 7-8, 1997, Pages 211-224

  Collet, Chris ^a   Candy, Judith ^a   Richardson, Neil ^a   Sara, Vicki ^a  

^a QUEENSLAND UNIVERSITY OF TECHNOLOGY   (Australia)

Author keywords

Barramundi; Gene structure; IGFII; Teleost

Indexed keywords

DNA; MESSENGER RNA; SOMATOMEDIN B;

ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; EXON; GENE EXPRESSION; GENE SEQUENCE; GENE STRUCTURE; GENETIC ORGANIZATION; INTRON; NONHUMAN; PROMOTER REGION; RAINBOW TROUT; SALMON; SEQUENCE HOMOLOGY; TELEOST;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BLOTTING, NORTHERN; CLONING, MOLECULAR; FISHES; GENE EXPRESSION; INSULIN-LIKE GROWTH FACTOR II; MOLECULAR SEQUENCE DATA; POLYMERASE CHAIN REACTION; RNA, MESSENGER; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID;

ANIMALIA; LATES CALCARIFER; ONCORHYNCHUS MYKISS; SALMONIDAE; TELEOSTEI;

EID: 0031471415     PISSN: 00062928     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1021840931297     Document Type: Article

References (26)

1. Bulmer, M., Wolfe, K. H., and Sharp, P. M. (1994). Synonymous nucleotide substitution rates in mammalian genes: Implications for the molecular clock and the relationship of mammalian orders. Proc. Natl. Acad. Sci. USA 88:5974.
2. Cao, Q.-P., Duguay, S. J., Plisetskaya, E., Steiner, D. F., and Chan, S. J. (1989). Nucleotide sequence and growth hormone-regulated expression of salmon insulin-like growth factor 1 mRNA. Mol. Endocrinol 3:2005.
3. Chomczynski, P., and Sacchi, N. (1987). Single-step method of RNA isolation by acid guanidium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162:156.
4. Duguay, S. J., Park, L. K., Samadpour, M., and Dickhoff, W. W. (1992). Nucletotide sequence and tissue distribution of three insulin-like growth factor 1 prohormones in salmon. Mol. Endocrinol. 6:1202.
5. Duguay, S. J., Swanson, P., and Dickhoff, W. W. (1994). Differential expression and hormonal regulation of alternatively spliced IGF-1 mRNA transcripts in salmon. J. Mol. Endocrinol. 12:25.
6. Duguay, S. J., Chan, S. J., Mommsen, T. P., and Steiner, D. F. (1995). Divergence of insulin-like growth factors I and II in the elasmobranch Squalus acanthias. FEBS Lett. 371:69.
7. Duguay, S. J., Lai-Shang, J., Steiner, D. F., Fukenstein, B., and Chan, S. J. (1996). Developmental and tissue-regulated expression of IGF-I and IGF-II mRNAs in Sparus aurata. J. Mol. Endocrinol. 16:123.
8. Easteal, S., and Collet, C. (1994). Consistent variation in amino-acid substitution rates, despite uniformity of mutation rate: protein evolution in mammals is not neutral. Mol. Biol. Evol. 11:643.
9. Jones, J. I., and Clemmons, D. R. (1995). Insulin-like growth factors and their binding proteins: biological actions. Endocrinol. Rev. 16:3.
10. Kavsan, V. M., Koval, A. P., Grebenjuk, V. A., Chan, S. J., Steiner, D. F., Roberts, C. T., Jr., and LeRoith, D. (1993a). Structure of the chum salmon insulin-like growth factor I gene. DNA Cell Biol. 12:729.
11. Kavsan, V., Koval, A., Petrenko, O., Roberts, C. T., Jr., and LeRoith, D. (1993b). Two insulin genes are present in the salmon genome. Biochem. Biophys. Res. Comm. 191:1373.
12. Kavsan, V. M., Grebenjuk, V. A., Koval, A. P., Skorokhod, A. S., Roberts, C. T., Jr., and LeRoith, D. (1994). Isolation of a second non-allelic insulin-like growth factor I gene from the salmon genome. DNA Cell Biol. 13:555.
13. Kinhult, A. (1996). Barramundi (Lates calcarifer) IGF-I: Characterisation of cDNA, Genomic Sequences, and Regulation of mRNA Expression, Ph.D. thesis, Queensland University of Technology, Brisbane, Australia.
14. Nagamatsu, S., Chan, S. J., Falkmer, S., and Steiner, D. F. (1991). Evolution of the insulin gene superfamily. Sequence of a preproinsulin-like growth factor cDNA from the Atlantic hagfish. J. Biol. Chem. 266:2397.
15. Nelson, J. S. (1984). Fishes of the World, 2nd ed., Wiley, New York.
16. Nimer, S., Fraser, J., Richards, J., Lynch, M., and Gasson, J. (1990). The repeated sequence CATT(A/T) is required for granulocyte-macrophage colony stimulating factor promoter activity. Mol. Cell. Biol. 10:6084.
17. Palamarchuk, A. Y., Nektrutenko, A. Y., Gritzenko, O. B., and Kavsan, V. M. (1996). Genbank accession number X97225.
18. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989). Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
19. Sanger, F., Nicklen, S., and Coulson, A. R. (1977). DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci, USA 74:5463.
20. Sara, V. R., and Hall, K. (1990). Insulin-like growth factors and their binding proteins. Physiol. Rev. 70:591.
21. Shamblott, M. J., and Chen, T. T. (1992). Identification of a second insulin-like growth factor in a fish species. Proc. Natl. Acatl. Sci USA 89:8913.
22. Shamblott, M. J., and Chen, T. T. (1993). Age-related and tissue-specific levels of five forms of insulin-like growth factor mRNA in a teleost. Mol. Marine Biol. Biotech. 2:351.
23. Shamblott, M. J., Cheng, C. M., Bolt, D., and Chen, T. T. (1995). Appearance of insulin-like growth factor mRNA in the liver and pyloric caeca of a teleost in response to exogenous growth hormone. Proc. Natl. Acad. Sci. USA 92:6943.
24. Shen, X., Wang, Y., Welt, M., Liu, D., and Leung, F. C. (1993). Genbank accession number L04688.
25. Wallis, A. E., and Devlin, R. H. (1993). Dupicate insulin-like growth factor I genes in salmon display alternative splicing pathways. Mol. Endocrinol. 7:409.
26. Yowe, D. L., and Epping, R. J. (1995). Cloning of barramundi growth hormone-encoding gene: A comparative analysis of higher and lower vertebrate GH genes. Gene 162:255.