메뉴 건너뛰기




Volumn 19, Issue 5-6, 1997, Pages 408-414

Aromatic hydrocarbon degradation by Sphingomonas yanoikuyae B1

Author keywords

Biodegradation; Biphenyl; Naphthalene; Phenanthrene; Polycyclic; Sphingomonas; Xylene

Indexed keywords

AROMATIC HYDROCARBON; BIPHENYL; NAPHTHALENE; PHENANTHRENE; POLYCYCLIC AROMATIC HYDROCARBON; TOLUENE; XYLENE;

EID: 0031468281     PISSN: 13675435     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.jim.2900475     Document Type: Article
Times cited : (112)

References (31)
  • 1
    • 0016656969 scopus 로고
    • Absolute sterochemistry of the dihydroanthracene-cis-and -trans-1,2-diols produced from anthracene by mammals and bacteria
    • Akhtar MN, DR Boyd, NJ Thompson, M Koreeda, DT Gibson, V Mahadevan and DM Jerina. 1975. Absolute sterochemistry of the dihydroanthracene-cis-and -trans-1,2-diols produced from anthracene by mammals and bacteria. J Chem Soc [Perkin 1] 23: 2506-2511.
    • (1975) J Chem Soc [Perkin 1] , vol.23 , pp. 2506-2511
    • Akhtar, M.N.1    Boyd, D.R.2    Thompson, N.J.3    Koreeda, M.4    Gibson, D.T.5    Mahadevan, V.6    Jerina, D.M.7
  • 2
    • 0018378931 scopus 로고
    • Bacterial and fungal oxidation of dibenzofuran
    • Cerniglia CE, JC Morgan and DT Gibson. 1979. Bacterial and fungal oxidation of dibenzofuran. Biochem J 180: 175-185.
    • (1979) Biochem J , vol.180 , pp. 175-185
    • Cerniglia, C.E.1    Morgan, J.C.2    Gibson, D.T.3
  • 3
    • 0025195680 scopus 로고
    • Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria
    • de Lorenzo V, M Herrero, U Jakubzik and KN Timmis. 1990. Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosomal insertion of cloned DNA in gram-negative eubacteria. J Bacteriol 172: 6568-6572.
    • (1990) J Bacteriol , vol.172 , pp. 6568-6572
    • De Lorenzo, V.1    Herrero, M.2    Jakubzik, U.3    Timmis, K.N.4
  • 4
    • 0026478831 scopus 로고
    • Bacterial metabolism of naphthalene: Construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydronaphthalene and subsequent reactions
    • Eaton RW and PJ Chapman. 1992. Bacterial metabolism of naphthalene: construction and use of recombinant bacteria to study ring cleavage of 1,2-dihydronaphthalene and subsequent reactions. J Bacteriol 174: 7542-7554.
    • (1992) J Bacteriol , vol.174 , pp. 7542-7554
    • Eaton, R.W.1    Chapman, P.J.2
  • 5
    • 0020612907 scopus 로고
    • Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo
    • Ensley BD, BJ Ratzkin, TD Osslund, MJ Simon, LP Wackett and DT Gibson. 1983. Expression of naphthalene oxidation genes in Escherichia coli results in the biosynthesis of indigo. Science 222: 167-169.
    • (1983) Science , vol.222 , pp. 167-169
    • Ensley, B.D.1    Ratzkin, B.J.2    Osslund, T.D.3    Simon, M.J.4    Wackett, L.P.5    Gibson, D.T.6
  • 6
    • 78651193202 scopus 로고
    • Oxidative metabolism of phenanthrene and anthracene by soil pseudomonads; the ring fission mechanism
    • Evans WC, HN Fernley and E Griffiths. 1965. Oxidative metabolism of phenanthrene and anthracene by soil pseudomonads; the ring fission mechanism. Biochem J 95: 819-821.
    • (1965) Biochem J , vol.95 , pp. 819-821
    • Evans, W.C.1    Fernley, H.N.2    Griffiths, E.3
  • 7
    • 0016861706 scopus 로고
    • Oxidation of the carcinogens benzo [a] pyrene and benzo [a] anthracene to dihydrodiols by a bacterium
    • Gibson DT, V Mahadevan, DM Jerina, H Yogi and HJ Yeh. 1975. Oxidation of the carcinogens benzo [a] pyrene and benzo [a] anthracene to dihydrodiols by a bacterium. Science 189: 295-297.
    • (1975) Science , vol.189 , pp. 295-297
    • Gibson, D.T.1    Mahadevan, V.2    Jerina, D.M.3    Yogi, H.4    Yeh, H.J.5
  • 9
    • 0025787605 scopus 로고
    • Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWWO plasmid xylXYZ, genes encoding benzoate dioxygenases
    • Harayama S, M Rekik, A Bairoch, EL Neidle and LN Ornston. 1991. Potential DNA slippage structures acquired during evolutionary divergence of Acinetobacter calcoaceticus chromosomal benABC and Pseudomonas putida TOL pWWO plasmid xylXYZ, genes encoding benzoate dioxygenases. J Bacteriol 173: 7540-7548.
    • (1991) J Bacteriol , vol.173 , pp. 7540-7548
    • Harayama, S.1    Rekik, M.2    Bairoch, A.3    Neidle, E.L.4    Ornston, L.N.5
  • 11
    • 0000018869 scopus 로고
    • Synthesis and absolute configuration of the bacterial cis-1,2-, cis-8,9-, and cis-10,11-dihydrodiol metabolites of benz[a]anthracene formed by a strain of Beijerinckia
    • Jerina DM, PJ van Bladeren, H Yagi, DT Gibson, V Mahadevan, AS Neese, M Koreeda, ND Sharma and DR Boyd. 1984. Synthesis and absolute configuration of the bacterial cis-1,2-, cis-8,9-, and cis-10,11-dihydrodiol metabolites of benz[a]anthracene formed by a strain of Beijerinckia. J Org Chem 49: 3621-3628.
    • (1984) J Org Chem , vol.49 , pp. 3621-3628
    • Jerina, D.M.1    Van Bladeren, P.J.2    Yagi, H.3    Gibson, D.T.4    Mahadevan, V.5    Neese, A.S.6    Koreeda, M.7    Sharma, N.D.8    Boyd, D.R.9
  • 12
    • 0029917956 scopus 로고    scopus 로고
    • Reclassification of a polycyclic aromatic hydrocarbon-metabolizing bacterium, Beijerinckia sp strain B1, as Sphingomonas yanoikuyae by fatty acids analysis, protein pattern analysis, DNA-DNA hybridization, and 16S ribosomal DNA sequencing
    • Khan AA, R-F Wang, W-W Cao, W Franklin and CE Cerniglia. 1996. Reclassification of a polycyclic aromatic hydrocarbon-metabolizing bacterium, Beijerinckia sp strain B1, as Sphingomonas yanoikuyae by fatty acids analysis, protein pattern analysis, DNA-DNA hybridization, and 16S ribosomal DNA sequencing. Int J Syst Bacteriol 46: 466-490.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 466-490
    • Khan, A.A.1    Wang, R.-F.2    Cao, W.-W.3    Franklin, W.4    Cerniglia, C.E.5
  • 13
    • 26844574486 scopus 로고
    • MS Thesis, University of Texas at Austin, Austin
    • Kilbourn RG. 1979. MS Thesis, University of Texas at Austin, Austin.
    • (1979)
    • Kilbourn, R.G.1
  • 14
    • 0029945654 scopus 로고    scopus 로고
    • Homology between genes for aromatic hydrocarbon degradation in surface and deep-subsurface Sphingomonas strains
    • Kim E, PJ Aversano, MF Romine, RP Schneider and GJ Zylstra. 1996. Homology between genes for aromatic hydrocarbon degradation in surface and deep-subsurface Sphingomonas strains. Appl Environ Microbiol 62: 1467-1470.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 1467-1470
    • Kim, E.1    Aversano, P.J.2    Romine, M.F.3    Schneider, R.P.4    Zylstra, G.J.5
  • 16
    • 0029056671 scopus 로고
    • Molecular and biochemical characterization of two meia-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp strain B1
    • Kim E and GJ Zylstra. 1995. Molecular and biochemical characterization of two meia-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp strain B1. J Bacteriol 177: 3095-3103.
    • (1995) J Bacteriol , vol.177 , pp. 3095-3103
    • Kim, E.1    Zylstra, G.J.2
  • 17
    • 0000107059 scopus 로고    scopus 로고
    • Nucleotide sequence of a 40 kilobase pair region from Sphingomonas yanoikuyae B1 involved in biphenyl, naphthalene, and xylene degradation
    • Kim E and GJ Zylstra. 1996. Nucleotide sequence of a 40 kilobase pair region from Sphingomonas yanoikuyae B1 involved in biphenyl, naphthalene, and xylene degradation. Abstracts of the 96th General Meeting of the American Society of Microbiology 1996, p 444.
    • (1996) Abstracts of the 96th General Meeting of the American Society of Microbiology 1996 , pp. 444
    • Kim, E.1    Zylstra, G.J.2
  • 18
    • 0030837179 scopus 로고    scopus 로고
    • Role of 2-hydroxychromene-2-carboxylate isomerase (NahD) in degradation of anthracene by Sphingomonas yanoikuyae B1
    • Kim E, GJ Zylstra, JP Freeman, TM Heinze, J Deck and CD Cerniglia. 1997. Role of 2-hydroxychromene-2-carboxylate isomerase (NahD) in degradation of anthracene by Sphingomonas yanoikuyae B1. FEMS Microbiol Lett 153: 479-484.
    • (1997) FEMS Microbiol Lett , vol.153 , pp. 479-484
    • Kim, E.1    Zylstra, G.J.2    Freeman, J.P.3    Heinze, T.M.4    Deck, J.5    Cerniglia, C.D.6
  • 19
    • 0017165911 scopus 로고
    • Degradation of phenanthrene through o-phthalate by an Aeromonas sp
    • Kiyohara H, K Nagao and R Nomi. 1976. Degradation of phenanthrene through o-phthalate by an Aeromonas sp. Agri Biol Chem 40: 1075-1082.
    • (1976) Agri Biol Chem , vol.40 , pp. 1075-1082
    • Kiyohara, H.1    Nagao, K.2    Nomi, R.3
  • 20
    • 0018901829 scopus 로고
    • Metabolism of dibenzo-p-dioxin and chlorinated dibenzo-p-dioxins by a Beijerinckia species
    • Klecka GM and DT Gibson. 1980. Metabolism of dibenzo-p-dioxin and chlorinated dibenzo-p-dioxins by a Beijerinckia species. Appl Environ Microbiol 39: 288-296.
    • (1980) Appl Environ Microbiol , vol.39 , pp. 288-296
    • Klecka, G.M.1    Gibson, D.T.2
  • 21
    • 0000858913 scopus 로고
    • Absolute stereochemistry of cis-1,2-, trans-1,2-, and cis-3,4-dihydrodiol metabolites of phenanthrene
    • Koreeda M, MN Akhtar, DR Boyd, JD Neill, DT Gibson and DM Jerina. 1978. Absolute stereochemistry of cis-1,2-, trans-1,2-, and cis-3,4-dihydrodiol metabolites of phenanthrene. J Org Chem 43: 1023-1027.
    • (1978) J Org Chem , vol.43 , pp. 1023-1027
    • Koreeda, M.1    Akhtar, M.N.2    Boyd, D.R.3    Neill, J.D.4    Gibson, D.T.5    Jerina, D.M.6
  • 22
    • 0017741540 scopus 로고
    • Metabolism of dibenzothiophene by a Beijerinckia species
    • Laborde AL and DT Gibson. 1977. Metabolism of dibenzothiophene by a Beijerinckia species. Appl Environ Microbiol 34: 783-790.
    • (1977) Appl Environ Microbiol , vol.34 , pp. 783-790
    • Laborde, A.L.1    Gibson, D.T.2
  • 23
    • 0024099724 scopus 로고
    • Bacterial oxidation of chemical carcinogens: Formation of polycyclic aromatic acids from benz[a]anthracene
    • Mahaffey WR, DT Gibson and CE Cerniglia. 1988. Bacterial oxidation of chemical carcinogens: formation of polycyclic aromatic acids from benz[a]anthracene. Appl Environ Microbiol 54: 2415-2423.
    • (1988) Appl Environ Microbiol , vol.54 , pp. 2415-2423
    • Mahaffey, W.R.1    Gibson, D.T.2    Cerniglia, C.E.3
  • 25
    • 0026017943 scopus 로고
    • Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases
    • Neidle EL, C Hartnett, LN Ornston, A Bairoch, M Rekik and S Harayama. 1991. Nucleotide sequences of the Acinetobacter calcoaceticus benABC genes for benzoate 1,2-dioxygenase reveal evolutionary relationships among multicomponent oxygenases. J Bacteriol 173: 5385-5395.
    • (1991) J Bacteriol , vol.173 , pp. 5385-5395
    • Neidle, E.L.1    Hartnett, C.2    Ornston, L.N.3    Bairoch, A.4    Rekik, M.5    Harayama, S.6
  • 26
    • 0027494959 scopus 로고
    • Oxidation of carbazole to 3-hydroxycarbazole by naphthalene 1,2-dioxygenase and biphenyl 2,3-dioxygenase
    • Resmck SM, DS Torok and DT Gibson. 1993. Oxidation of carbazole to 3-hydroxycarbazole by naphthalene 1,2-dioxygenase and biphenyl 2,3-dioxygenase. FEMS Microbiol Lett 113: 297-302.
    • (1993) FEMS Microbiol Lett , vol.113 , pp. 297-302
    • Resmck, S.M.1    Torok, D.S.2    Gibson, D.T.3
  • 27
    • 0028263710 scopus 로고
    • Pseudomonas aeruginosa 142 uses a three-component ortho-halobenzoate 1,2-dioxygenase for metabolism of 2,4-dichloro- and 2-chlorobenzoate
    • Romanov V and RP Hausinger. 1994. Pseudomonas aeruginosa 142 uses a three-component ortho-halobenzoate 1,2-dioxygenase for metabolism of 2,4-dichloro- and 2-chlorobenzoate. J Bacteriol 176: 3368-3374.
    • (1994) J Bacteriol , vol.176 , pp. 3368-3374
    • Romanov, V.1    Hausinger, R.P.2
  • 28
    • 0024939288 scopus 로고
    • Geology and hydrology of the deep subsurface microbiology sampling sites at the Savannah River Plant, South Carolina
    • Sargent KA and CB Fliermans. 1995. Geology and hydrology of the deep subsurface microbiology sampling sites at the Savannah River Plant, South Carolina. Geomicrobiology 7: 3-13.
    • (1995) Geomicrobiology , vol.7 , pp. 3-13
    • Sargent, K.A.1    Fliermans, C.B.2
  • 29
    • 0021210237 scopus 로고
    • Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene
    • Schocken MJ and DT Gibson. 1984. Bacterial oxidation of the polycyclic aromatic hydrocarbons acenaphthene and acenaphthylene. Appl Environ Microbiol 48: 10-16.
    • (1984) Appl Environ Microbiol , vol.48 , pp. 10-16
    • Schocken, M.J.1    Gibson, D.T.2
  • 30
    • 0023705037 scopus 로고
    • Genetics of naphthalene catabolism in pseudomonads
    • Yen K-M and CM Serdar. 1988. Genetics of naphthalene catabolism in pseudomonads. Crit Rev Microbiol 15: 247-267.
    • (1988) Crit Rev Microbiol , vol.15 , pp. 247-267
    • Yen, K.-M.1    Serdar, C.M.2
  • 31
    • 0000515385 scopus 로고
    • The absolute stereochemistry of several cis-dihydrodiols microbially produced from substituted benzenes
    • Ziffer H, K Kabuto, DT Gibson, VM Kobal and DM Jenna. 1977. The absolute stereochemistry of several cis-dihydrodiols microbially produced from substituted benzenes. Tetrehedron 33: 2491-2496.
    • (1977) Tetrehedron , vol.33 , pp. 2491-2496
    • Ziffer, H.1    Kabuto, K.2    Gibson, D.T.3    Kobal, V.M.4    Jenna, D.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.