Redundant RNA recognition events in bicoid mRNA localization

RNA

Volumn 3, Issue 12, 1997, Pages 1413-1420

  Macdonald, Paul M ^a   Kerr, Karen ^a  

^a STANFORD UNIVERSITY   (United States)

Author keywords

3' UTR; Drosophila; Oogenesis; Posttranscriptional control

Indexed keywords

CIS ACTING ELEMENT; MESSENGER RNA; RNA;

ARTICLE; DROSOPHILA; MOLECULAR RECOGNITION; NONHUMAN; OOCYTE DEVELOPMENT; PRIORITY JOURNAL; RNA TRANSPORT; TRANSGENE;

ANIMALS; BASE SEQUENCE; BIOLOGICAL TRANSPORT; DROSOPHILA; DROSOPHILA PROTEINS; EGG PROTEINS; GENES, INSECT; HOMEODOMAIN PROTEINS; MOLECULAR SEQUENCE DATA; MUTATION; NUCLEIC ACID CONFORMATION; OOCYTES; OOGENESIS; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE DELETION; TRANS-ACTIVATORS; TRANSGENES;

EID: 0031467467     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (37)

1. Berleth T, Burri M, Thoma G, Bopp D, Richstein S, Frigerio G, Noll M, Nüsslein-Volhard C. 1988. The role of localization of bicoid RNA in organizing the anterior pattern of the Drosophila embryo. EMBO J 7:1749-1756.
2. Chalfie M, Tu Y, Euskirchen G, Ward WW, Prasher DC. 1994. Green fluorescent protein as a marker for gene expresion. Science 263:802-805.
3. Chao YC, Donahue KM, Pokrywka NJ, Stephenson BC. 1991. Sequence of strullow, a gene required for the localization of bicoid message in Drosophila eggs. Dev Genet 12:333-341.
4. Clark I, Giniger E, Ruohola-Baker H, Jan LY, Jan YN. 1994. Transient posterior localization of a kinesin fusion protein reflects antero-posterior polarity of the Drosophila oocyte. Curr Biol 4:289-300.
5. Clark IE, Jan LY, Jan YN. 1997. Reciprocal localization of Nod and kinesin fusion proteins indicates microtubule polarity in the Drosophila oocyte, epithelium, neuron and muscle. Development 124:461-470.
6. Davis I, Ish-Horowicz D. 1991. Apical localization of pair-rule transcripts requires 3′ sequences and limits protein diffusion in the Drosophila bastoderm embryo. Cell 67:927-940.
7. Ferrandon D, Elphick I., Nüsslein-Volhard C, St Johnston D. 1994. Staufen protein associates with the 3′UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner. Cell 79:1221-1232.
8. Fenandon D, Koch I, Westhof E, Nüsslein-Volhard C. 1997. RNA-RNA interaction is required for the formation of specific bicoid mRNA 3′ UTR-STAUFEN ribonucleoprotein particles. EMBO J. 16:1751-1758.
9. Gavis ER, Curtis D, Lehmann R. 1996. Identification of cis-acting sequences that control nanos RNA localization. Dev Biol 176:36-50.
10. Karlin-McGinness M, Serano TL, Cohen RS. 1996. Comparative analysis of The kinetics and dynamics of K10, bicoid, and oskar mRNA localization in the Drosophila oocyte. Dev Genetics 19:238-248.
11. Kim-Ha J, Kerr K, Macdonald PM. 1995. Translational regulation of oskar mRNA by bruno, an overian RNA-binding protein, is essential. Cell 81:403-412.
12. Kim-Ha J, Webster PJ, Smith JL, Macdonald PM. 1993. Multiple RNA regulatory elements mediate distinct steps in localization of oskar mRNA. Devolopment 119:169-178.
13. Kislauskis EH, Zhu X, Singer RH. 1994. Sequences responsible for intracellular localization of β-actin messenger RNA also affect cell phenotype. J Cell Biol 127:441-451.
14. Lantz V, Schedl P. 1994. Multiple cis-acting targeting sequences are required for orb mRNA localization during Drosophila oogenesis. Mol Cell Biol 14:2235-2242.
15. Li Mg, McGrail M, Serr M, Hays TS. 1994. Drosophila cytoplasmic dynein, a microtubule motor that is asymmetrically localized in the oocyte. J Cell Biol 126:1475-1494.
16. Macdonald PM. 1990. bicoid mRNA localization signal: Phylogenetic conservation of function and RNA secondary structure. Development 170:161-171.
17. Macdonald PM. 1992. The means to the ends: Localization of maternal messenger RNAs. Dev Biol 3:413-424.
18. Macdonald PM, Ingham P, Struhl G. 1986. Isolation, structure and expression of even-skipped: A second pair-rule gene of Drosophila containing a homeo box. Cell 47:721-734.
19. Macdonald PM, Kerr K, Smith JL, Leask A. 1993. RNA regulatory element BLE1 directs the early steps of bicoid mRNA localization. Development 118:1233-1243.
20. Macdonald PM, Leask A, Kerr K. 1995 exl protein specifically binds BLE1, a bicoid mRNA localization element, and is required for one phase of its activity. Proc Natl Acad Sci USA 92:10787-10791.
21. Macdonald PM, Luk SKS, Kilpatrick M. 1991. Protein encoded by the exuperantia gene is concentrated at sites of bicoid mRNA accumulation in Drosophila nurse cells but not in oocytes or embryos. Genes& Dev 5:2455-2466.
22. Macdonald PM, Struhl G. 1988. Cis-acting sequences responsible for anterior localization of bicoid mRNA in Drosophila embryos. Nature 336:595-598.
23. Marcey D, Watkins WS, Hazelrigg T. 1991. The temporal and spatial distribution pattern of maternal exuperantia protein: Evidence for a role in establishment but not maintenance of bicoid mRNA localization. EMBO J 10:4259-4266.
24. Markussen FH, Michon AM, Breitwieser W, Ephrussi A. 1995. Translational control of oskar generates Short OSK, the isoform that induces pole plasm assembly. Development 121:3723-3732.
25. McCrail M, Gepner J, Silvanovich A, Ludmann S, Serr M, Hays TS. 1995 Regulation of cytoplasmic dynein function in vivo by the Drosophila glued complex. J Cell Biol 131:411-425.
26. Pokrywka N, Stephenson EC. 1991. Microtubules mediate the localization of bicoid mRNA during Drosophila oogenesis. Development 113:55-66.
27. Rongo C, Gavis ER, Lehmann R. 1995. Localization of oskar RNA regulates oskat translation and requires Oskar protein. Development 121:2737-2746.
28. Seeger MA, Kaufman TC. 1990. Molecular analysis of the bicoid gene from Drosophila pseudocbscura: Identification of conserved domains within coding and noncoding regions of the bicoid mRNA. EMBO J 9:2977-2987.
29. Serano TL, Cohen RS. 1995. A small predicted stem-loop struture mediates oocyte localization of Drosophila K10 mRNA. Devolopment 121:3809-3818.
30. St Johnston D. 1995. The intracellular localization of messenger RNAs. Cell 81:161-170.
31. St Johnston D, Brown NH, Gau JG. Jantsch M. 1992. A conserved double-stranded RNA-binding domain. Proc Natl Acad Sci USA 89:10979-10983.
32. St Johnston D, Driever W, Berleth T, Richstein S, Nüsslein-Volhard C. 1989. Multiple steps in the localization of bicoid RNA to the anterior pole of the Drosophila oocyte. Development 107(Suppl):13-19.
33. Stephenson EC, Chao Y, Fackenthal JD. 1988. Molecular analysis of the strullow gene of Drosophila melanogaster. Genes & Dev 2:1655-1665.
34. Theurkauf WE, Smiley S, Wang ML, Alberts BM. 1992. Reorganization of the cytoskeleton during Drosophila oogenesis: Implication for axis specifications and intercellular transport. Development 115:923-936.
35. Wang C, Lehmann R. 1991. Nanos is the localized posterior determinant in Drosophila, Cell 66:637-647.
36. Wang S, Hazelrigg T. 1994. Implication for bcd mRNA localization from spatial distribution of exu protein in Drosophila oogenesis. Nature 369:400-403.
37. Zuker M. 1989. On finding all suboptimal foldings of an RNA molecule. Science 244:48-52.