Molecular and physiological investigations of Exophiala species described from fish

Systematic and Applied Microbiology

Volumn 20, Issue 4, 1997, Pages 585-594

  Uijthof, J M J ^a   Figge, M J ^a   De Hoog, G S ^a  

^a CBS KNAW FUNGAL BIODIVERSITY CENTRE   (Netherlands)

Author keywords

Black yeasts; Fish pathology; ITS1 sequences; Nutritional physiology; PCR RFLP; Soil fungi; Taxonomy

Indexed keywords

FUNGAL DNA; RIBOSOME DNA;

ARTICLE; FISH; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SPECIES DIFFERENCE; YEAST;

EID: 0031466778     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0723-2020(97)80030-6     Document Type: Article

References (38)

1. BLAZER, V. S., WOLKE, R. E.: An Exophiala like fungus as the cause of a systemic mycosis of marine fish. J. Fish Dis. 2, 145-152 (1979)
2. CARMICHAEL, J. W.: Cerebral mycetoma of trout due to a Phialophora like fungus. Sabouraudia 5, 120-123 (1966)
3. DE HOOG, G. S.: Rhinocladiella and allied genera. Stud. Mycol. 15, 1-140 (1977)
4. DE HOOG, G. S., GERRITS VAN DEN ENDE, A. H. G., UIJTHOF, J. M. J., UNTEREINER, W. A.: Nutritional physiology of type isolates of currently accepted species of Exophiala and Phaeococcomyces. Antonie van Leeuwenhoek 68, 43-49 (1995)
5. DE HOOG, G. S., GUARRO, J. (eds.): Atlas of Clinical Fungi. Baarn / Reus, Centraalbureau voor Schimmelcultures / Universitat Rovira i Virgili 1995
6. DE HOOG, G. S., GUÉHO, E. MASCLAUX, F., GERRITS VAN DEN ENDE, A. H. G., KWON-CHUNG, K. J., MCGINNIS, M. R.: Nutritional physiology and taxonomy of human-pathogenic Cladosporium-Xylohypha species. J. Med. Vet. Mycol. 33, 339-347 (1995)
7. DE HOOG, G. S., MCGINNIS, M. R.: Ascomycetous black yeasts. Stud. Mycol. 30, 187-199 (1987)
8. DEPRIEST, P. T.: Small subunit rDNA variation in a population of lichen fungi due to optional group I introns. Gene 134, 67-71 (1993)
9. DE RIJK, P., DE WACHTER, R.: DCSE, an interactive tool for sequence alignment and secondary structure research. Comp. Appl. Biosci. 9, 315-322 (1993)
10. FIJAN, N.: Systematic mycosis in channel fish. Bull. Wildlife Dis. Assoc. 5, 109 (1969)
11. GARGAS, A., DEPRIEST, P. T., TAYLOR, J. W.: Positions of multiple insertions in SSU rDNA of lichen-forming fungi. Mol. Biol. Evol. 12, 208-218 (1995)
12. GOTO, S., AONO, R., SUGIYAMA, J., HORIKOSHI, K.: Exophiala alcalophila, a new black yeast-like hyphomycete with an accompanying Phaeococcomyces alcalophilus morph, and its physiological characteristics. Trans. Mycol. Soc. Japan. 22, 429-439 (1981)
13. HAASE, G., SONNTAG, L., VAN DE PEER, Y., UIJTHOF, J. M. J., PODBIELSKI, A., MELZER-KRICK, B.: Phylogenetic analysis of ten black yeast species using small subunit rRNA gene sequences. Antonie van Leeuwenhoek 68, 19-33 (1995)
14. IWATSU, T., UDAGAWA, S.: Materials for the fungus flora of Japan. Trans. Mycol. Soc. Japan 25, 389-394 (1984)
15. KAWASAKI, M., ISHIZAKI, H., NISHIMURA, K., MIYAJI, M.: Mitochondrial DNA analysis of Exophiala jeanselmei and Exophiala dermatitidis. Mycopathologia 110, 107-112 (1990)
16. KAWASAKI, M., ISHIZAKI, H., NISHIMURA, K., MIYAJI, M.: Mitochondrial DNA analysis of Exophiala moniliae. Mycopathologia 121, 7-10 (1993)
17. LANGDON, J. S., MCDONALD, W. L.: Cranial Exophiala pisciphila infection in Salmo solar in Australia. Bull. Eur. Assoc. Fish Pathol. 7, 35-37 (1987)
18. LANGVAD, F., PEDERSEN, O., ENGJOM, K.: A fungal disease caused by Exophiala sp. nova in farmed Atlantic salmon in Western Norway, pp. 323-328. In: Fish and Shellfish Pathology; First Int. Conf. Eur. Assoc. Fish Pathol. (A. E. ELLIS, ed.) London, Academic Press 1985
19. MASCLAUX, F., GUÉHO, E., DE HOOG, G. S.: Phylogenetic relationships of human pathogenic Cladosporium (Xylohypha) species inferred from partial LSU rRNA sequences. J. Med. Vet. Mycol. 33, 327-338 (1995)
20. MASUDA, M., NAKA, W., TAJIMA, S., HARADA, T., NISHIKAWA, T., KAUFMAN, L., STANDARD, P.: Deoxyribonucleic acid hybridization studies of Exophiala dermatitidis and Exophiala jeanselmei. Microbiol. Immunol. 33, 631-639 (1989)
21. MCGINNIS, M. R., AJELLO, L.: A new species of Exophiala isolated from channel catfish. Mycologia 66, 518-520 (1974)
22. MÖLLER, E. M., BAHNWEG, G., SANDERMANN, H., GEIGER, H. H.: A simple and efficient protocol for isolation of high molecular weight DNA from filamentous fungi, fruit bodies, and infected plant tissue. Nucleic Acids Res. 20, 6115-6116 (1992)
23. MORGAN-JONES, G., CULBREATH, A. K., RODRIGUEZ-KABANA, R.: Notes on hyphomycetes. XLIX. Xenokylindria obovata, a new species isolated from diseased eggs of the nematode Meloidogyne arenaria, and X. prolifera. Mycotaxon 20, 599-606 (1984)
24. OTIS, E. J., WOLKE, R. E., BLAZER, V. S.: Infection of Exophiala salmonis in Atlantic salmon (Salmo salar L.). J. Wildlife Dis. 21, 61-64 (1985)
25. PAPENDORF, M. C.: New South African soil fungi. Trans. Br. Mycol. Soc. 52, 483-489 (1969)
26. PEDERSEN, O. A., LANGVAD, F.: Exophiala psychrophila sp. nov., a pathogenic species of the black yeasts isolated from farmed Atlantic salmon. Mycol. Res. 92, 153-156 (1989)
27. RICHARDS, R. H., HOLLIMAN, A., HELGASON, S.: Exophiala salmonis infection in Atlantic salmon Salmo salar L. J. Fish Dis. 1, 357-368 (1978)
28. SAMBROOK, J., FRITSCH, E. F., MANIATIS, T.: Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory Press, New York 1989
29. SPATAFORA, J. W., MITCHELL, T. G., VILGALYS, R.: Analysis of genes coding for small subunit rRNA sequences in studying phylogenetics of dematiaceous fungal pathogens J. Clin. Microbiol. 33, 1322-1326 (1995)
30. SUGIYAMA, J., NAGAI, K., KOMAGATA, K.: Ubiquinone systems in strains of species in the black yeast genera Phaeococcomyces, Exophiala, Hortaea and Rhinocladiella. J. Gen. Appl. Microbiol. Tokyo 33, 197-204 (1987)
31. TAKEO, K., DE HOOG, G. S.: Karyology and hyphal characters as taxonomic criteria in Ascomycetous black yeasts and related fungi. Antonie v. Leeuwenhoek 60, 35-42 (1991)
32. UIJTHOF, J. M. J.: Relationships within the black yeast genus Exophiala based on ITS1 sequences. Mycol. Res. 100, 1265-1271 (1996)
33. UIJTHOF, J. M. J., DE HOOG, G. S.: PCR-Ribotyping of isolates of currently accepted Exophiala and Phaeococcomyces species. Antonie v. Leeuwenhoek 68, 35-42 (1995)
34. UIJTHOF, J. M. J., VAN BELKUM, A., DE HOOG, G. S., HAASE, G.: Exophiala dermatitidis and Sarcinomyces phaeomuriformis: ITS1 sequencing and development of a molecular probe. J. Med. Vet. Mycol. 1996 (submitted)
35. VAN DE PEER, Y., DE WACHTER, R.: Treecon: a software package for the construction and drawing of evolutionary trees. Comp. Appl. Biosci. 9, 177-182 (1993)
36. VAN DER WALT, J. P., YARROW, D.: Methods for the isolation, maintenance, classification and identification of yeasts, pp. 45-104. In: The Yeasts, a Taxonomic Study (N. J. W. KREGER-VAN RIJ, ed.) 4th edn, Amsterdam, Elsevier Science Publishers 1984
37. WHITE, T. J., BRUNS, T., LEE, S., TAYLOR, J.: Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, pp. 315-322. In: PCR Protocols: A guide to methods and applications (N. INNIS, J. GELFLAND, T. WHITE, eds.) New York, Academic Press 1990
38. YAMADA, Y., SUGIHARA, K., VAN EIJK, G. W., ROEIJMANS, H. J., DE HOOG, G. S.: Coenzyme Q systems in ascomycetous black yeasts. Antonie v. Leeuwenhoek 56, 349-356 (1989)