Microsatellite development and survey of variation in northern bluefin tuna (Thunnus thynnus)

Molecular Marine Biology and Biotechnology

Volumn 6, Issue 4, 1997, Pages 308-314

  Broughton, Richard E ^a,b   Gold, John R ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b Cornell University ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENETIC VARIATION; MICROSATELLITE MARKER; MICROSATELLITE MARKET; NORTHERN BLUEFIN TUNA; STOCK ASSESSMENT;

THUNNUS THYNNUS;

EID: 0031448758     PISSN: 10536426     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (29)

1. Bartlet, S.E., and Davidson, W.S. (1991). Identification of Thunnus tuna species by the polymerase chain reaction and direct sequence analysis of their mitochondrial cytochrome b genes. Can J Fish Aquat Sci 48:309-317.
2. Block, B.A., Finnerty, J.R., Stewart, A.F.R., and Kidd, J. (1993). Evolution of endothermy in fish: mapping physiological traits on a molecular phylogeny. Science 260:210-214.
3. Brooker, A.L., Cook, D., Bentzen, P., Wright, J.M., and Doyle, R.W. (1994). Organization of microsatellites differs between mammals and cold-water teleost fishes. Can J Fish Aquat Sci 51:1959-1966.
4. Chow, S., and Kishino, H. (1995). Phylogenetic relationships between tuna species of the genus Thunnus (Scombridae: Teleostei): inconsistent implications from morphology, nuclear and mitochondrial genomes. J Mol Evol 41:741-748.
5. Edmunds, P.H., and Sammons, J.I. (1973). Similarity of genic polymorphism of tetrazolium oxidase in bluefin tuna (Thunnus thynnus) from the Atlantic coast of France and the western North Atlantic. J Fish Res Board Can 30: 1031-1032.
6. Estoup, A., Presa, P., Krieg, F., Vaiman, D., and Guyomard, R. (1993). (CT)n and (GT)n microsatellites: a new class of genetic markers for Salmo trutta L. (brown trout). Heredity 71:488-496.
7. Excoffier, L., Smouse, P., and Quattro, J. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial restriction data. Genetics 131:479-491.
8. Garcia de Leon, F.J., Dallas, J.F., Chatain, B., Canonne, M., Versini, J.J., and Bonhomme, F. (1995). Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1958) (Perciformes: Serranidae). Mol Mar Biol Biotechnol 4:62-68.
9. Goff, D.J., Galvin, K., Katz, H., Westerfield, M., Lander, E.S., Tabin, C.J. (1992). Identification of polymorphic simple sequence repeats in the genome of the zebrafish. Genomics 14:200-202.
10. Graves, J. E., (1996). Conservation genetics of fishes in the pelagic marine realm. In: Avise, J.C., and Hamrick, J.L. (eds.). Conservation Genetics: Case Histories from Nature. New York: Chapman & Hall, 335-366.
11. Jarne, P., and Lagoda, P.J.L. (1996). Microsatellites, from molecules to populations and back. Trends Ecol Evol 11:424-429.
12. Levinson, G., and Gutman, G.A. (1987). Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Mol Biol Evol 4:203-221.
13. Miller, L.M., and Kapuscinski, A.R. (1996). Microsatellite DNA markers reveal new levels of genetic variation in northern pike. Trans Am Fish Soc 125:971-977.
14. National Research Council (1994). An Assessment of Atlantic Bluefin Tuna. Washington, D.C.: National Academy Press.
15. Queller, D.C., Strassmann, J.E., and Hughes, C.R. (1993). Microsatellites and kinship. Trends Ecol Evol 8:285-288.
16. Rice, W.R. (1989). Analyzing tables of statistical tests. Evolution 43:223-225.
17. Richards, W.J. (1976). Spawning of bluefin tuna (Thunnus thynnus) in the Atlantic Ocean and adjacent seas. ICCAT, Coll Vol Sci Pap 5:267-278.
18. Rico, C., Zadworny, D., Kuhnlein, U., and FitzGerald, G.J. (1993). Characterization of hypervariable microsatellite loci in the threespine stickleback Gasterosteus aculeatus. Mol Ecol 2:271-272.
19. Roff, D.A., and Bentzen, P. (1989). The statistical analysis of mitochondrial DNA polymorphisms: X2 and the problem of small samples. Mol Biol Evol 6:539-545.
20. Rousset, F. (1996). Equilibrium values of measures of population subdivision for stepwise mutation processes. Genetics 142:1357-1362.
21. Slatkin, M. (1995). A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
22. Slettan, A., Olsaker, I., and Lie, O. (1993). Isolation and characterization of (GT)n repetitive sequences from Atlantic salmon, Salmo salar L. Anim Genet 24:195-197.
23. Suzuki, Z. (1991). Migration - western Atlantic. In: Deriso, R.B., and Bayliff, W.H. (eds.). World Meeting on Stock Assessment of Bluefin Tunas: Strengths and Weaknesses. La Jolla, Calif.: Inter-American Tropical Tuna Commission, 129-130.
24. Swofford, D.L., and Selander, R.K. (1981). BIOSYS-1. Urbana, Ill.: University of Illinois, Urbana-Champain.
25. Tautz, D. (1989). Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res 17:6463-6471.
26. Thompson, H.C., and Contin, R.F. (1979). Electrophoretic study of Atlantic bluefin tuna from the eastern and western North Atlantic Ocean. ICCAT SCRS 79/96.
27. Weber, J., and May, D. (1989). Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am J Hum Genet 44:388-396.
28. Weber, J.L. (1990). Informativeness of human (dC-dA)n-(dG-dT)n polymorphisms. Genomics 7:524-530.
29. Wright, S. (1978). Evolution and the Genetics of Populations, vol. 4, Variability Within and Among Natural Populations. Chicago, Ill.: University of Chicago Press.