Biochemical characterization of Arabidopsis wild-type and mutant phytochrome B holoproteins

Plant Cell

Volumn 9, Issue 12, 1997, Pages 2271-2280

  Elich, Tedd D ^a,b   Chory, Joanne ^a,b  

^a HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^b MONSANTO COMPANY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS;

EID: 0031420987     PISSN: 10404651     EISSN: None     Source Type: Journal    
DOI: 10.1105/tpc.9.12.2271     Document Type: Article

References (36)

1. Andel III, F., Lagarias, U.C., and Mathies, R.A. (1996). Resonance raman analysis of chromophore structure in the lumi-R photoproduct. Biochemistry 35, 15997-16008.
2. Bradley, J.M., Murphy, G.P., Whitelam, G.C., and Harberd, N.P. (1996). Identification of phytochrome B amino acid residues mutated in three new phyB mutants of Arabidopsis thai/ana. J. Exp. Bot. 47,1449-1455.
3. Casa), J.J. (1996). Phytochrome A enhances the promotion of hypocotyl growth caused by reductions in levels of phytochrome B in its FR-light-absorbing form in light-grown Arabidopsis thaliana. Plant Physiol. 112,965-973.
4. Cherry, J.R., Hondred, D., Walker, J.M., Keller, J.M., Hershey, H.P., and Vierstra, R.D. (1993). Carboxy-terminal deletion analysis of oat phytochrome A reveals the presence of separate domains required for structure and biological activity. Plant Cell 5,565-575.
5. Euch, T.D., and Chory, J. (1994). Initial events in phytochrome signaling: Still in the dark. Plant Mol. Biol. 26,1315-1327.
6. Euch, T.D., and Lagarias, J.C. (1989). Formation of a photoreversible phycocyanobilin-apophytochrome adduct in vitro. J. Biol. Chem. 264,12902-12908.
7. Fankhauser, C., and Chory, J. (1997). Light control of plant development. Annu. Rev. Cell Dev. Biol., in press.
8. Furuya, M., and Song, P.-S. (1994). Assembly and properties of holophytochrome. In Photomorphogenesis in Plants, 2nd ed, R.E. Kendrick and G.H.M. Kronenberg, eds (Dordrecht, The Netherlands: Kluwer Academic Publishers), pp. 105-140.
9. Hamazato, F., Shinomura, T., Hanzawa, H., Chory, J., and Furuya, M. (1997). Fluence and wavelength requirements for Arabidopsis CAB gene induction by different pnytocnromes. Plant Physiol. 115,1533-1540.
10. Jones, A.M., and Quail, P.H. (1986). Quaternary structure of 124kilodalton phytochrome from Avena sativa L Biochemistry 25, 2987-2995.
11. Kay, S. (1997). PAS, present and future: Clues to the origin of circadian clocks. Science 276, 753-754.
12. Kleber, J.J., Rothenberg, M., Roman, G., Feldmann, K.A., and Ecker, J.R. (1993). CTR1, a negative regulator of the ethylene response pathway in Arabidopsis, encodes a member of the Raf family of protein kinases. Cell 72,427-441.
13. Kunkel, T.A., Roberts, J.D., and Zakou, R.A. (1987). Rapid and efficient site-specific mutagenesis without phenotypic selection. Methods Enzymol. 154,367-385.
14. Kunkel, T., Tomizawa, K.-l., Kern, R., Furuya, M., Chua, N.-H., and Schafer, E. (1993). In vitro formation of a photoreversible adduct of phycocyanobilin and tobacco apophytochrome B. Eur. J. Biochem. 215,587-594.
15. Kunkel, T., Speth, V., Buche, C., and Schafer, E. (1995). In vivo characterization of phytocnrome-phycocyanobilin adducts in yeast. J. Biol. Chem. 270, 20193-20200.
16. Lagarias, D.M., Wu, S.-H., and Lagarias, U.C. (1995). Atypical phytochrome gene structure in the green alga Mesotaenium caldariorum. Plant Mol. Biol. 29,1127-1142.
17. Lagarias, J.C., and Lagarias, D.M. (1989). Self-assembly of synthetic phytochrome holoprotein in vitro. Proc. Natl. Acad. Sei. USA 86, 5778-5780.
18. Lagarias, U.C., and Mercuric, P.M. (1985). Structure function studies on phytochrome. Identification of light-induced conformational changes in 124-kDa Avena phytochrome in vitro. J. Biol. Chem. 260,2415-2423.
19. Li, L., and Lagarias, J.C. (1992). Phytochrome assembly. Defining chromophore structural requirements for covalent attachment and photoreversibility. J. Biol. Chem. 267,19204-19210.
20. Murphy, J.T., and Lagarias, J.C. (1997). Purification and characterization of recombinant affinity-peptide-tagged oat phytochrome A. Photochem. Photobiol. 65, 750-758.
21. Nagatani, A., Reed, J.W., and Chory, J. (1993). Isolation and initial characterization of Arabidopsis mutants that are deficient in phytochrome A. Plant Physiol. 102,269-277.
22. Parks, B.M., and Quail, P.H. (1993). hy8, a new class of Arabidopsis long hypocotyl mutants deficient in functional phytochrome A. Plant Cell 5,39-48.
23. Quail, P.H., Boylan, M.T., Parks, B.M., Short, T.W., Xu, Y., and Wagner, D. (1995). Phytochromes: Photosensory perception and signal transduction. Science 268, 675-680.
24. Reed, J.W., Nagpal, P., Poole, D.S., Furuya, M., and Chory, J. (1993). Mutations in the gene for the red/far-red light receptor phytochrome B alter cell elongation and physiological responses throughout Arabidopsis development. Plant Cell 5,147-157.
25. Robson, P.R.H., Whitelam, G.G., and Smith, H. (1993). Selected components of the shade-avoidance syndrome are displayed in a normal manner in mutants of Arabidopsis thaliana and Brassica napa deficient in phytochrome B. Plant Physiol. 102,1179-1184.
26. Ruddat, A., Schmidt, P., Gatz, C., Braslavsky, S.E., Gartner, W., and Schaffner, K. (1997). Recombinant type A and B phytochromes from potato: Transient absorption spectroscopy. Biochemistry 36,103-111.
27. Schmidt, T.G.M., and Skerra, A. (1994). One step affinity purification of bacterially produced proteins by means of the "Strep tag" and immobilized recombinant core streptavidin. J. Chromatogr. 676, 337-345.
28. Schneider-Poetsch, H.A.W. (1992). Signal transduction by phytochrome: Phytochromes have a module related to the transmitter modules of bacterial sensor proteins. Photochem. Photobiol. 56, 839-846.
29. Shinomura, T., Nagatani, A., Hanzawa, H., Kubota, M., Watanabe, M., and Furuya, M. (1996). Action spectra for phytochrome A- and B-specific photoinduction of seed germination in Arabidopsis thaliana. Proc. Natl. Acad. Sei. USA 93, 8129-8133.
30. Smith, H. (1995). Physiological and ecological function within the phytochrome family. Annu. Rev. Plant Physiol. Plant Mol. Biol. 46, 289-315.
31. Terry, M.J., Maines, M.D., and Lagarias, J.C. (1993). Inactivation of phytochrome- and phycobiliprotein-chromophore precursors by rat liver biliverdin reductase. J. Biol. Chem. 268, 26099-26106.
32. Wagner, D., and Quail, P.H. (1995). Mutational analysis of phytochrome B identifies a small COOH-terminal-domain region critical for regulatory activity. Proc. Nail. Acad. Sei. USA 92,8596-8600.
33. Wagner, D., Tepperman, Ü.M., and Quail, P.H. (1991). Overexpression of phytochrome B induces a short hypocotyl phenotype in transgenic Arabidopsis. Plant Cell 3,1275-1288.
34. Wahleithner, J.A., Li, L., and Lagarias, J.C. (1991). Expression and assembly of spectrally active recombinant holophytochrome. Proc. Natl. Acad. Sei. USA 88,10387-10391.
35. Whitelam, G.C., Johnson, E., Peng, J., Carol, P., Anderson, M.L., Cowl, J.S., and Harberd, N.P. (1993). Phytochrome A null mutants of Arabidopsis display a wild-type phenotype in white light. Plant Cell 5, 757-768.
36. Yen, K.-C., Wu, S.-H., Murphy, J.T., and Lagarias, J.C. (1997). A cyanobacterial phytochrome two-component light sensory system. Science 277,1505-1508.