Comparison of British populations of potato cyst nematodes with populations from continental Europe and South America using RAPDs

Genome

Volumn 40, Issue 3, 1997, Pages 286-293

  Blok, V C ^a   Phillips, M S ^a   Harrower, B E ^a  

^a SCOTTISH CROP RESEARCH INSTITUTE   (United Kingdom)

Author keywords

Genetic variation; Globodera pallida; Introductions; RAPDs

Indexed keywords

EID: 0031409262     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g97-040     Document Type: Article

References (31)

1. Bakker, J., Bouwman-Smits, L., and Gommers F.J. 1992. Genetic relationships between Globodera pallida pathotypes in Europe assessed by using two dimensional gel electrophoresis of proteins. Fundam. Appl. Nematol. 15: 481-490.
2. Bakker, J., Folkerstsma, R.T., Roupe Van Der Voort, J.N.A.M., De Boer, J.M., and Gommers, F.J. 1993. Changing concepts and molecular approaches in the management of virulence genes in potato cyst nematode. Annu. Rev. Phytopathol. 31: 169-190.
3. Blok, V.C., and Phillips, M.S. 1995. The use of repeat sequence primers for investigating the genetic diversity between populations of potato cyst nematodes with differing virulence. Fundam. Appl. Nematol. 18: 575-582.
4. Blok, V.C., Malloch, G., Harrower, B.E., Phillips, M.S., and Vrain, T.C. 1997. Intraspecific variation in ribosomal DNA in populations of the potato cyst nematode G. pallida. J. Nematol. In press.
5. Canto-Saenz, M.A., and de Scurrah, M.M. 1977. Races of the potato cyst nematode in the Andean region and a new system of classification. Nematologica, 23: 340-349.
6. Caswell-Chen, E.P., Williamson, V.M., and Wu, F.F. 1992. Random amplified polymorphic DNA analysis of Heterodera cruciferae and H. schachtii populations. J. Nematol. 24: 343-351.
7. Cenis, J.L. 1993. Identification of four major Meloidogyne spp. by random amplified polymorphic DNA (RAPD-PCR). Phytopathology, 83: 76-80.
8. Evans, K., and Stone, A.R. 1977. A review of the distribution and biology of the potato cyst nematodes Globodera rostochiensis and G. pallida. PANS Bull. 23: 417-430.
9. Felsenstein, J. 1985. Confidence-limits on phylagenies - an approach using the bootstrap. Evolution, 39: 783-791.
10. Ferris, V.R., Miller, L.I., Faghihi, J., and Ferris, J.M. 1995. Ribosomal DNA comparisons of Globodera from two continents. J. Nematol. 27: 273-283.
11. Fleming, C.C., and Marks, R.J. 1983. The identification of the potato cyst nematodes Globodera rostochiensis and G. pallida by isoelectric focusing of proteins on polyacrylamide gels. Ann. Appl. Biol. 103: 277-281.
12. Folkertsma, R.T., Rouppe Van Der Voort, J.N.A.M, Van Gent-pelzer, M.P.E., De Groot, K.E. Van Den Bos, W.J., Schots, A., Bakker, J., and Gommers, F.J. 1994. Inter- and infra-specific variation between populations of Globodera rostochiensis and G. pallida revealed by random amplified polymorphic DNA. Phytopathology, 84: 807-811.
13. Folkertsma, R.T., De Groot, K.E., Van Koert, P.H.G., Van Gent-pelzer, M.P.E., Rouppe Van Der Voort, J.N.A.M., Schots, A., Bakker, J., Gommers, F.J., and Helder, J. 1996a. Cluster analysis of 36 Globodera pallida field populations using two sets of molecular markers. Eur. J. Plant Pathol. 102: 577-584.
14. Folkertsma, R.T., Rouppe Van Der Voort, J.N.A.M., De Groot, K.E., Van Zandvoort, P.M., Schots, A., Gommers, F.J., Helder, J., and Bakker, J. 1996b. Gene pool similarities of potato cyst nematode populations assessed by AFLP analysis. Mol. Plant-Microbe Interact. 9: 47-54.
15. Fox, P.C., and Atkinson, H.J. 1984. Isoelectric focusing of general proteins and specific enzymes from pathotypes of Globodera rostochiensis and G. pallida. Parasitology, 88: 131-139.
16. Guirao, P., Moya, A., and Cenis, L. 1995. Optimal use of random amplified polymorphic DNA in estimating the genetic relationship of four major Meloidogyne spp. Phytopathology, 85: 547-551.
17. Kort, J., Ross, H., Rumpenhorst, H.J., and Stone, A.R. 1977. An international pathotype scheme for identifying and classifying pathotypes of potato cyst nematodes Globodera rostochiensis and G. pallida. Nematologica, 23: 333-339.
18. López-Braña. I., Romero, M.D., and Delibes, A. 1996. Analysis of Heterodera avenue populations by the random amplified polymorphic DNA technique. Genome, 39: 118-122.
19. Nei, M., and Li, W. 1979. Mathematical models for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U.S.A. 76: 5269-5273.
20. Pastrik, K.H., Rumpenhorst, H.J., and Burgermeister, W. 1995. Random amplified polymorphic DNA analysis of a Globodera pallida population selected for virulence. Fundam. Appl. Nematol. 18: 109-114
21. Payne, R.W., Lane, P.W., Ainsley, E.E., Bicknell, K.E., Digby, P.G.N., Harding, S.A., Leech, P.K., Simpson, H.R., Todd, A.D., Verrier, P.J., and White, R.P. 1988. Genstat 5 Reference Manual. Clarendon Press, Oxford.
22. Phillips, M.S., and Dale, M.F.B. 1982. Assessing potato seedling progenies for resistance to the white potato cyst nematode. J. Agric. Sci. 99: 67-70.
23. Phillips, M.S., and Trudgill, D.L. 1983. Variations in the ability of Globodera pallida to produce females on potato clones bred from Solanum vernei or S. tuberosum ssp. andigena CPC 2802. Nematologica, 29, 217-226.
24. Phillips, M.S., Hackett, C.A., and Trudgill, D.L. 1991. The relationship between initial and final population densities of the potato cyst nematode Globodera pallida for partially resistant potatoes. J. Appl. Ecol. 28: 109-119.
25. Phillips, M.S., Harrower, B.E., Trudgill, D.L., Waugh, R., and Catley, M.A. 1992. Genetic variation in British populations of Globodera pallida as revealed by isozyme and DNA analysis. Nematologica, 38: 301-319.
26. Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
27. Schnick, D., Rumpenhorst H.J., and Burgermeister W. 1990. Differentiation of closely related Globodera pallida (Stone) populations by means of DNA restriction fragment length polymorphisms (RFLPs). J. Phytopathol, 130: 127-136.
28. Thiéry, M. and Mugniéry, D. 1996. Interspecific rDNA restriction fragment length polymorphism in Globodera species, parasites of Solanaceous plants. Fundam. Appl. Nematol. 19: 471-479.
29. Welsh, J. and McClelland, M. 1990. Fingerprinting genomes using PCR with arbitary primers. Nucleic Acids Res. 18: 7213-7218.
30. Williams, G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., and Tingey, S.V. 1990. DNA polymorphisms amplified by arbitrary primers are useful genetic markers. Nucleic Acids Res. 18: 6531-6535.
31. Xue, B., Baillie, D.Ll., and Webster, J.Mm. 1993. Amplified fragment length polymorphisms of Meloidogvne spp. using oligonucleotide primers. Fundam. Appl. Nematol. 16: 481-487.