Morphological, physiological and molecular genetic characterization of Arabidopsis himalaica, with reference to A. thaliana

Journal of Plant Research

Volumn 110, Issue 1, 1997, Pages 15-23

  Tsukaya, Hirokazu ^a   Yokoyama, Jun ^a,b   Ikeda, Hiroshi ^c   Kuroiwa, Haruko ^d   Kuroiwa, Tsuneyoshi ^a   Iwatsuki, Kunio ^a,e  

^a UNIVERSITY OF TOKYO   (Japan)

^b TOHOKU UNIVERSITY   (Japan)

^c MUSEUM OF NATURE AND HUMAN ACTIVITIES   (Japan)

^d KYORITSU WOMEN'S UNIVERSITY   (Japan)

^e RIKKYO UNIVERSITY   (Japan)

Author keywords

Arabidopsis himalaica; Chromosome number; Himalaya; Phylogenetic tree; Rbcl; Size of genome

Indexed keywords

ARABIDOPSIS THALIANA; CRUCIHIMALAYA HIMALAICA;

EID: 0031287622     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/bf02506838     Document Type: Article

References (45)

1. Al-Shehbaz, I.A. 1994. Erysimum hedgeanum (Brassicaceae), a new name replacing Arabidopsis erysimoides. Novon 4: 1-2.
2. Al-Shehbaz, I.A. and O'Kane, S.L. 1995. Placement of Arabidopsis parvula in Thellugiella (Brassicaceae). Novon 5: 309-310.
3. Al-Shehbaz, I.A. and O'Kane, S.L. Arabidopsis gamosepala and A. tuemurica transferred to Neotorularia. Novon (in press).
4. Bowman, J.L., Alvarez, J., Weigel, D., Meyerowitz, E.M., and Smyth, D.R. 1993. Control of flower development in Arabidopsis thaliana by APETALA1 and interacting genes. Development 119: 721-743.
5. Chang, C., Bowman, J.L., DeJohn, A.W., Lander, E.S. and Meyerowitz, E.M. 1988. Restriction fragment length polymorphism linkage map for Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA 85: 6856-6860.
6. Chase, M.W., D.E. Soltis, R.G. Olmstead, D. Morgan, D.H. Les, B.D. Mishler, M.R. Duvall, R.A. Price, H.G. Hills, Y.-L. Qiu, K.A. Kron, J.H. Retting, E. Conti, J.D. Palmer, J.R. Manhart, K.J. Sytsma, H.J. Michaels, W.J. Kress, K.G. Karol, W.D. Clark, M. Hedrén, B.S. gaut, R.K. Jansen, K.-J. Kim, C.F. Wimpee, J.F. Smith, G.R. Furnier, S.H. Strauss, Q.-Y. Xiang, G.M. Plunkett, P.S. Soltis, S.M. Swensen, S.E. Williams, P.A. Gadek, C.J. Quinn, L.E. Eguiarte, E. Golenberg, G.H. Learn, Jr., S.W. Graham, S.C.H. Barrett, S. Dayanandan and V.A. Albert 1993. Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL. Ann. Missouri Bot. Gard. 80: 528-580.
7. Conti, E., Fischbach, A. and Sytsma, K.J. 1993. Tribal relationships in Onageraceae: Implications from rbcL sequence data. Ann. Missouri Bot. Gard. 80: 672-685.
8. Felsenstein, J. 1981. Evolutionary trees from DNA sequences: A maximum liklihood approach. J. Mol. Evol. 17: 368-376.
9. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
10. Gielly, L. and Taberlet, P. 1994. The use of chloroplast DNA to resolve plant phylogenies: Noncording versus rbcL sequences. Mol. Biol. Evol. 11: 769-777.
11. Higgins, D.G., Bleasby, A.J. and Fuchs, R. 1992. CLUSTAL V: improved software for multiple sequence alignment. Compt. Appl. Biosci. 8: 189-191.
12. Hülskamp, M., Miséra, S. and Jürgens, G. 1994. Genetic dissection of trichome cell development in Arabidopsis. Cell 76: 555-566.
13. Johnson, L.A. and Soltis, D.E. 1995. Phylogenetic inference in Saxifragaceae sensu stricto and Gilia (Polemoniaceae) using matK sequences. Ann. Missouri Bot. Gard. 82: 149-175.
14. 6 fluorescence microscopy. Protoplasma 186: 183-192.
15. Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
16. Kuroiwa, T., Miyamura, S., Kawano, S., Hizume, M., Toh-e, A., Miyakawa, I. and Sando, N. 1986. Cytological characterization of NOR in the bivalent of Saccharomyces cerevisiae. Exp. Cell. Res. 165: 199-206.
17. Lin, C.M., Liu, Z.-Q. and Kung, S.D. 1986. Nicotiana chloroplast genome, X: Correlation between the DNA sequences and the isoelectric focusing patterns of the LS of Rubisco. Pl. Mol. biol. 6: 81-87.
18. Lloyd, A.M., Walbot, V. and Davis, R.W. 1992. Arabidopsis and Nicotiana anthocyanin production activated by maize regulators R and C1. Science 258: 1773-1775.
19. Meyerowitz, E.M. and Pruitt, R.E. 1985. Arabidopsis thaliana and plant molecular genetics. Science 229: 1214-1218.
20. Mummenhoff, K. and Koch, M. 1994. Chloroplast DNA restriction site variation and phylogenetic relationships in the genus Thlaspi sensu lato (Brassicaceae). Syst. Bot. 19: 73-88.
21. Mummenhoff, K., Kuhnt, E., Koch, M. and Zunk, K. 1995. Systematic impliations of chloroplast DNA variation in Lepidium section Carfamon, Lepiocardamon and Lepia (Brassicaceae). Pl. Syst. Evol. 196: 75-88.
22. Naqshi, A.R. and Javeid, G.N. 1985. The genus Arabidopsis Heynh. (Brassicaceae) in J & K state. Econ. Tax. Bot. 7: 617-627.
23. Nei, M. and Li, W.-H. 1979. Mathematical model for studying genetic variation in terms of restriction endonuclease. Proc. Natl. Acad. Sci. USA 76: 5269-5273.
24. O'Kane, S.L., Al-Shehbaz, I.A. and Schaal, B.A. 1995. Phylogenetics of Arabidopsis: scope and content based on DNA sequences of nuclear rDNA internal transcribed spacers. Amer. J. Bot. 82, suppl.: 154.
25. O'Kane, S.L., Schaal, B.A. and Al-Shehbaz, I.A. The origins of Arabidopsis suecica (Brassicaceae), as indicated by nuclear rDNA sequences, and implications for concerned evolution. Syst. Bot. (in press).
26. Olmstead, R., Michaels, H.J., Scott, K.M. and Palmer, J.D. 1992. Monophyly of the asteridae and identification of their major lineages inferred from DNA sequences of rbcL. Ann. Missouri. Bot. Gard. 79: 249-265.
27. Olmstead, R.G. and Reeves, P.A. 1995. Evidence for the polyphyly of the Scrophlariaceae based on chloroplast rbcL and ndhF sequences. Ann. Missouri Bot. Gard. 82: 176-193.
28. Olmstead, R.G. and Sweere, J.A. 1994. Combining data in phylogenetic systematics: An empirical approach using three molecular data sets in the Solanaceae. Syst. Biol. 43: 467-481.
29. Olsen, G. J., Matsuda, H., Hagstrom R., and Overbeek, R. 1994. fastDNAml: a tool for construcion of phylogenetic trees of DNA sequences using maximum liklihood. CABIOS 10: 41-48.
30. Palmer, J.D., Shields, C.R., Cohen, D.B. and Orton, T.J. 1983. Chloroplast DNA evolution and the origin of amphidiploid Brassica species. Theor. Appl. Genet. 65: 181-189.
31. Price, R.A., Al-Shehbaz, I.A. and Palmer, J.D. 1995. Systematic relationships of Arabidopsis: a molecular and morphological perspective. In C. Sommerville and E. Meyerowitz eds., Arabidopsis. New York, Cold Spring Harbor Press, pp. 7-19.
32. Rédei, G.P. 1970. Arabidopsis thaliana (L.) Heynh.: a review of the genetics and biology. Bib. Genet. 20: 1-151
33. Rodman, J. 1991. A taxonomic analysis of glucosinolate-producing plants, Part 2: Cladistics. Syst. Bot. 16: 619-629.
34. Rodman, J., Price, R.A., Karol, K., Conti, E., Sytsma K.J. and Palmer, J.D. 1993. Nucleotide sequences of the rbcL gene indicate monophyly of mustard oil plants. Ann. Missouri Bot. Gard. 80: 686-699.
35. Sarich, V.M. and Wilson, A.C. 1973. Generation time and genomic evolution in primates. Science 179: 1144-1147.
36. Schultz, E.A. and Haughn, G.W. 1991. LEAFY, a homeotic gene that regulates inflorescence development in Arabidopsis. Plant Cell 3: 771-781.
37. Schultz, E.A. and Haughn, G.W. 1993. Genetic analysis of the floral initiation process (FLIP) in Arabidopsis. Development 119: 745-765.
38. Schulz, O.E. 1924. Arabidopsis. In A. Engler, ed., Pflanzenreich 4 (105): 268-285. Leipzig: Verlag von Wilhelm Engelmann.
39. Shannon, S. and Meeks-Wagner 1993. Genetic interactions that regulate inflorescence development in Arabidopsis. Plant Cell 5: 639-655.
40. Swofford, D.L. 1991. PAUP: Phylogenetic Analysis Using Parsimony, version 3.1.1. Illinois Natural History Survey, Champaign.
41. Tai-yien, C., Rong-lin, G., Yong-zhen, L., Lian-li, L., Kechien, K. and Zheng-xi, A. 1987. Arabidopsis. In C, Tai-yien, ed., Flora Reipublicae Popularis Sinicae. 33: 280-288.
42. Tsukaya, H., Inaba-Higano, K., and Komeda, Y. 1995. Phenotypic characterization and molecular mapping of an acaulis2 mutant of Arabidopsis thaliana with flower stalks of much reduced length. Plant Cell Physiol. 36: 239-246.
43. Tsukaya, H., Naito, S., Rédei, G.P. and Komeda, Y. 1993. A new class of mutations in Arabidopsis thaliana, acaulis1, affecting the development of both inflorescences and leaves. Development 118: 751-764.
44. Tsukaya, T., Ohshima, S. Naito, M., Chino, and Komeda, Y. 1991. Sugar-dependent expression of the CHS-A gene for chalcone synthase from Petunia in transgenic Arabidopsis. Plant Physiology 97: 1414-1421.
45. Wu, C.-I. and Li, W.-H. 1985. Evidence for higher rate of nucleotide substitution in rodents than in man. Proc. Natl. Acad. Sci. USA 82: 1741-1745.