Construction of phylogenetic tree for nicotiana species based on RAPD markers

Journal of Plant Research

Volumn 110, Issue 2, 1997, Pages 187-193

  Yu, Yung Luen ^a   Lin, Tsai Yun ^a  

^a NATIONAL TSING HUA UNIVERSITY   (Taiwan)

Author keywords

Nicotiana; Phylogenetic tree; RAPD

Indexed keywords

NICOTIANA; NICOTIANA SYLVESTRIS;

EID: 0031285940     PISSN: 09189440     EISSN: None     Source Type: Journal    
DOI: 10.1007/bf02509307     Document Type: Article

References (19)

1. Backeljau, T., De Bruyn, L., De Wolf, H., Jordaens, K., Van Dongen, S. and Winnepenninckx, B. 1996. Multiple UPGMA and neighbor-joining trees and the performance of some computer packages. Mol. Biol. Evol. 13: 309-313.
2. Beckmann, J.S. and Soller, M. 1983. Restriction fragment length polymorphisms in genetic improvement methodologies, mapping and costs. Theor. Appl. Genet. 67: 35-43.
3. Chaparro, J.X., Werner, D.J., O'Malley, D. and Sederoff, R.R. 1994. Targeted mapping and linkage analysis of morphological isozyme, and RAPD markers in peach. Theor. Appl. Genet. 87: 805-815.
4. Demeke, T., Adams, R.P. and Chibbar, R. 1992. Potential taxonomic use of random amplified polymorphic DNA (RAPD): a case study in Brassica. Theor. Appl. Genet. 84: 990-994.
5. Goodspeed, T.H. 1954. The Genus Nicotiana. Waltham, Massachusetts, Chronica, Botanica.
6. Joshi, C.P. and Nguyen, H.T. 1993. RAPD (random amplified polymorphic DNA) analysis based intervarietal genetic relationships among hexaploid wheats. Plant Sci. 93: 95-103.
7. Kostoff, D. 1943. Cytogenetics of the Genus Nicotiana. Karyosystematics, Genetics, Cytology, Cytogenetics and Phylesis of Tobaccos. Sofia, State Printing House.
8. Lamboy, W.F. 1994. Computing genetic similarity coefficients from RAPD data: the effects of PCR artifacts. PCR Methods Applic. 4: 31-37.
9. Martin, G.B., Williams, J.G.K. and Tanksley, S.D. 1991. Rapid identification of markers linked to a Pseudomonas resistance gene in tomato by using random primers and near-isogenic lines. Proc. Natl. Acad. Sci. USA 88: 2336-2340.
10. Reiter, R.S., Williams, J.G.K., Feldmann, K.A., Rafalski, J.A., Tingey, S.V. and Scolnik, P.A. 1992. Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs. Proc. Natl. Acad. Sci. USA 89: 1477-1481.
11. Rogers, S.O. and Bendich, A.J. 1988. Extraction of DNA from plant tissues. In S.B. Gelvin, R.A. Schilperoot, and D.P.S. Verma, eds., Plant Molecular Biology Manual, Dordrecht, Kluwer Academic Publishers, pp. A6: 1-10.
12. Rohlf, F.J. 1993. NTSYS-pc Numerical Taxonomy and Multivariate Analysis System, Version 1.80. New York, Applied Biostatistics.
13. Tanksley, S.D., Young, N.D., Paterson, A.H. and Bonierale, M.W. 1989. RFLP mapping in plant breeding: new tools for an old science. Biotechnology 7: 257-264.
14. Tingey, S.V. and del Tufo, J.P. 1993. Genetic analysis with random amplified polymorphic DNA markers. Plant Physiol. 101: 349-352.
15. Torres, A.M., Weeden, N.F. and Martin, A. 1993. Linkage among isozyme, RFLP and RAPD markers in Vicia faba. Theor. Appl. Genet. 85: 937-945.
16. Welsh, J. and McClelland, M. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18: 7213-7218.
17. Williams, J.G.K., Hanafey, M.K., Rafalski, J.A. and Tingey, S.V. 1993. Genetic analysis using random amplified polymorphic DNA markers. Method. Enzymol. 218: 704-740.
18. Yang, D.I., Feng, T.Y., Chen, C.C. and Lai, Y.K. 1992. Physical maps of Nicotiana chloroplast DNA constructed by an efficient procedure. Theor. Appl. Genet. 83: 515-527.
19. Yu, L.X. and Nguyen, H.T. 1994. Genetic variation detected with RAPD markers among upland and low-land rice cultivars (Oryza sativa L.). Theor. Appl. Genet. 87: 668-672.