Crystallization and preliminary X-ray crystallographic study of the ribosomal protein S7 from Bacillus stearothermophilus

Journal of Structural Biology

Volumn 120, Issue 1, 1997, Pages 112-114

  Harada, Nao ^a   Sano, Kazunari ^a   Kimura, Makoto ^a   Hosaka, Harumi ^b   Nakagawa, Atushi ^b   Tanaka, Isao ^b  

^a KYUSHU UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

REPRESSOR PROTEIN;

CRYSTALLIZATION; ELECTRON MICROSCOPY; GEOBACILLUS STEAROTHERMOPHILUS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; RNA ANALYSIS; RNA BINDING; SHORT SURVEY; STRUCTURE ACTIVITY RELATION; THREE DIMENSIONAL IMAGING; X RAY CRYSTALLOGRAPHY;

EID: 0031257472     PISSN: 10478477     EISSN: None     Source Type: Journal    
DOI: 10.1006/jsbi.1997.3907     Document Type: Article

References (23)

1. Brimacombe R., Almadja J., Stiege W., Schuler D. A detailed model of the three-dimensional structure ofEscherichia coliin situ. J. Mol. Biol. 199:1988;115-136.
2. Capel M. S., Engelman D. M., Freeborm B. R., Kjeldgaard M., Langer J. A., Ramakrishnan V., Schindler D. G., Schneider D. K., Schoenborn B. P., Sillers I. Y., Yabuki S., Moore P. B. A complete mapping of the proteins in the small ribosomal subunit ofEscherichia coli. Science. 238:1987;1403-1406.
3. Acta Crystallogr. D50:1994;760-763.
4. Donstova O., Kopylov A., Brimacombe R. The location of mRNA in the ribosomal 30S initiation complex; site-directed cross-linking of mRNA analogues carrying several photo-reactive labels simultaneously on either side of the AUG start codon. EMBO J. 10:1991;2613-2620.
5. Dragon F., Brakier-Gingras L. Interaction ofEscherichia coli. Nucleic Acids Res. 21:1993;1199-1203.
6. Dragon F., Payant C., Brakier-Gingras L. Mutational and structural analysis of the RNA binding site forEscherichia coli. J. Mol. Biol. 244:1994;74-85.
7. Held W. A., Ballou B., Mizushima S., Nomura M. Assembly mapping of 30S ribosomal proteins fromEscherichia coli. J. Biol. Chem. 249:1974;3103-3111.
8. Hoffmann D. W., Davies C., Gerchman S. E., Kycia J. H., Porter S. J., White S. W., Ramakrishnan V. Crystal structure of prokaryotic ribosomal protein L9: a bi-lobed RNA-binding protein. EMBO J. 13:1994;205-212.
9. Kimura M. The nucleotide sequences ofBacillus stearothermophilusstrEscherichia coli. Agric. Biol. Chem. 55:1991;207-213.
10. Matthews B. W. Solvent contents of protein crystals. J. Mol. Biol. 33:1968;491-497.
11. Osswald M., Greuer B., Brimacombe R., Stoffler G., Baumert H., Fasold H. RNA-protein cross-linking inEscherichia coli. Nucleic Acids Res. 15:1987;3221-3240.
12. Z. Otwinowski, 1991, Oscillation Data Reduction Program, Daresbury Study Weekend Proceedings, 80, 86, Science and Engineering Research Council, Daresbury Laboratory, UK.
13. Powers T., Changchien L.-M., Craven G. R., Noller H. F. Probing the assembly of the 3′ major domain of 16S ribosomal RNA: Quaternary interactions involving ribosomal proteins S7, S9, and S19. J. Mol. Biol. 200:1988;309-319.
14. Ramarkrishnan V., Gerehman S. E. Cloning sequencing, and overexpression of genes for ribosomal proteins fromBacillus stearothermophilus. J. Biol. Chem. 266:1991;880-885.
15. Reinbolt J., Tritsch D., Wittmann-Liebold B. The primary structure of ribosomal protein S7 fromEscherichia coli. FEBS Lett. 91:1978;297-301.
16. Saito K., Mattheakis L. C., Nomura M. Post-transcriptional regulation of thestrEscherichia coli. J. Mol. Biol. 235:1994;111-124.
17. Saito K., Nomura M. Post-transcriptional regulation of thestrEscherichia coli. J. Mol. Biol. 235:1994;125-139.
18. Sakabe N., Ikemizu S., Sakabe K., Higashi T., Nakagawa A., Watanabe N., Adachi S., Sasaki K. Weissenberg camera for macromolecules with imaging plate data collection system at the Photon Factory: Present status and future plan. Rev. Sci. Instrum. 66:1995;1276-1281.
19. Sakabe N., Watanabe N., Suzuki M., Miyahara J., Sasaki K., Sakabe K. Imaging Plate ST-V and Large IP reader IPR4080. Acta Crystallogr. A52:1996.
20. Stoffler-Melicke M., Stoffler G. Hardesty B., Kramer G. Structure Function, and Genetics of Ribosomes. 1986;28-46 Springer-Verlag, New York.
21. Studier F. W., Rosenberg A. H., Dunn J. J., Dubendorff J. W. Use of T7 RNA polymerase to direct the expression of cloned genes. Methods Enzymol. 185:1990;60-89.
22. Sylvers L. A., Kopylov A. M., Wower J., Hixson S. S., Zimmermann R. A. Photochemical cross-linking of the anticodon loop of yeast tRNAPhe to 30S-subunit protein S7 at the ribosomal A and P sites. Biochimie. 14:1992;381-389.
23. Wilson K. S., Appelt K., Badger J., Tanaka I., White S. W. Crystal structure of a prokaryotic ribosomal protein. Proc. Natl. Acad. Sci. USA. 83:1986;7251-7255.