Linkage map of phenotype and RFLP markers in rice

Plant Molecular Biology

Volumn 35, Issue 1-2, 1997, Pages 49-60

  Yoshimura, Atsushi ^a   Ideta, Osamu ^a   Iwata, Nobuo ^a  

^a KYUSHU UNIVERSITY   (Japan)

Author keywords

Linkage mapping; Phenotype markers; RFLP markers; Rice

Indexed keywords

EID: 0031239037     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/978-94-011-5794-0_5     Document Type: Article

References (36)

1. Causse MA, Fulton TM, Cho YG, Ahn SN, Chunwongse J, Wu K, Xiao J, Yu Z, Ronald PC, Harrington SE, Second G, McCouch SR, Tanksley SD: Saturated molecular map of the rice genome based on an interspecific backcross population. Genetics 138: 1251-1274 (1994).
2. Ideta O, Yoshimura A, Iwata N: An integrated linkage map of rice. In: Rice genetics III, Proceedings of the Third International Rice Genetics Symposium, October 1995. International Rice Research Institute, Manila, Philippines (in press).
3. Ishikawa R, Harada T, Niizeki M, Saito KI: Reconstruction of linkage map with isozyme, morphological and physiological markers in rice chromosome 12. Japan J Breed 42: 235-244 (1992).
4. Iwata N: The relationship between cytologically identified chromosomes and linkage groups in rice. In: Rice genetics. Proceedings of the International Rice Genetics Symposium; 27-31 May 1995, pp. 229-238. International Rice Research Institute, Manila, Philippines (1986).
5. Iwata N: Report of the committee on genetic stocks. Rice Genet Newsl 10: 40-61 (1993).
6. Iwata N, Omura T: Studies on the trisomics in rice plants (Oryza sativa L.). III. Relation between trisomics and genetic linkage groups. Japan J Breed 25: 363-368 (1975).
7. Iwata N, Omura T: Studies on the trisomics in rice plants (Oryza sativa L.). IV. On the possibility of association of three linkage groups with one chromosome. Jpn J Genet 51: 135-137 (1976).
8. Iwata N, Omura T: Linkage studies in rice (Oryza sativa L.). On some mutants derived from chronic gamma irradiation. J Fac Agric Kyushu Univ 21: 117-127 (1977).
9. Iwata N, Omura T, Satoh H: Linkage studies in rice (Oryza sativa L.). On some mutants for physiological leaf spots. J Fac Agric Kyushu Univ 22: 243-251 (1978).
10. Iwata N, Omura T, Satoh H: Linkage studies in rice. The sequence of genes at the eighth and eleventh linkage groups. Japan J Breed 28 (Suppl 1): 170-171 (1978) (in Japanese).
11. Iwata N, Satoh H, Omura T: Linkage studies in rice. New genes belonging to the 11th linkage group. Japan J Breed 29 (Suppl 2): 182-183 (1979) (in Japanese).
12. Iwata N, Satoh H, Omura T: Linkage studies in rice. On some marker genes locating on chromosome 12. Japan J Breed 33 (Suppl 1): 114-115 (1983) (in Japanese).
13. Iwata N, Satoh H, Omura T: Studies on the trisomics in rice plants (Oryza sativa L.). VII. Some marker genes located on chromosome 2 and their sequence on the linkage map. J Fac Agric Kyushu Univ 29: 139-144 (1984).
14. Iwata N, Satoh H, Omura T: The relationships between chromosomes identified cytologically and linkage groups. Rice Genet Newsl 1: 128-132 (1984).
15. Iwata N, Satoh H, Omura T: Linkage studies in rice. On the loci of some marker genes locating on the chromosome 5. Japan J Breed 35 (Suppl 1): 204-205 (1985) (in Japanese).
16. Iwata N, Satoh H, Yoshimura A: Linkage studies in rice (Oryza sativa L.). Linkage map of chromosome 3. Bull Inst Trop Agric Kyushu Univ 12: 1-9 (1989).
17. Iwata N, Satoh H, Yoshimura A: Linkage map of Nishimura's chromosome 8. Rice Genet Newsl 6: 106-108 (1989).
18. Khush GS, Kinoshita T: Rice karyotype, marker genes and linkage groups. In: Khush GS, Toenniesen GH (ed) Rice Biotechnology, pp. 83-108. CAB International, Wallingford (1991).
19. Kinoshita T: Report of committee on gene symbolization, nomenclature and linkage groups. Rice Genet Newsl 12: 9-153 (1995).
20. Kishimoto N, Shimosaka E, Matsuura S, Saito A: A current RFLP linkage map of rice: alignment of the molecular map with the classical map. Rice Genet Newsl 9: 118-124 (1992).
21. Kurata N, Nagamura Y, Yamamoto K, Harushima Y, Sue N, Wu J, Antonio BA, Shomura A, Shimizu T, Lin SY, Inoue T, Fukuda A, Shimano T, Kuboki Y, Toyama T, Miyamoto Y, Kirihara T, Hayasaka K, Miyao A, Monna L, Zhong HS, Tamura Y, Wang ZX, Momma T, Umehara Y, Yano M, Sasaki T, Minobe Y: A 300 kilobase interval genetic map of rice including 883 expressed sequences. Nature Genet 8: 365-372 (1994).
22. Matsuo T, Yano M, Satoh H, Omura T: Location of gene shr-1 on chromosome 3. Rice Genet Newsl 3: 60-61 (1986).
23. Matsuo T, Yano M, Satoh H, Iwata N, Omura T: Gene shr-2 located on chromosome 12. Rice Genet Newsl 3: 61-62 (1986).
24. McCouch SR, Kochert G, Yu ZH, Wang ZY, Khush GS, Coffman WR, Tanksley SD: Molecular mapping of rice chromosomes. Theor Appl Genet 76: 815-829 (1988).
25. Nagao S, Takahashi M: Trial construction of twelve linkage groups in Japanese rice. (Genetical studies on rice plant, XXVII). J Fac Agric Hokkaido Univ 53: 72-130 (1963).
26. Nonomura KI, Yoshimura A, Iwata N: Regional location of RFLP linkage groups on pachytene chromosomes 1, 3, 4, 9, and 12. Rice Genet Newsl 11: 117-119 (1994).
27. Omura T, Iwata N, Satoh H: Linkage studies in rice (Oryza sativa L.). On some virescent and chlorina mutants. J Fac Agric Kyushu Univ 23: 85-93 (1978).
28. Saito A, Yano M, Kishimoto N, Nakagahra M, Yoshimura A, Saito K, Kuhara S, Ukai Y, Kawase M, Nagamine T, Yoshimura S, Ideta O, Ohsawa R, Hayano Y, Iwata N, Sugiura M: Linkage map of restriction fragment length polymorphism loci in rice. Japan J Breed 41: 665-670 (1991).
29. Satoh H, Iwata N: Linkage analysis in rice. On three mutant loci for endosperm properties, ge (giant embryo), du-4 (dull endosperm-4) and flo-1 (floury endosperm-1). Japan J Breed 40 (Suppl 2): 268-269 (1990) (in Japanese).
30. Satoh H, Iwata N, Omura T: Linkage analysis in rice. On the loci of new virescent genes, v-9(t), v-10(t) and v-11(t). Japan J Breed 34 (Suppl 1): 286-287 (1984) (in Japanese).
31. Satoh H, Iwata N, Omura T: Linkage analysis in rice. On the loci of dripping-wet leaf genes, drp-5, drp-6, drp-7 and drp-8(t). Japan J Breed 36 (Suppl 1): 352-353 (1986) (in Japanese).
32. Singh K, Multani DS, Khush GS: Secondary trisomies and telotrisomics of rice: origin, characterization, and use in determining the orientation of chromosome map. Genetics 143: 517-529 (1996).
33. Singh K, Ishii T, Parco A, Huang N, Brar DS, Khush GS: Centromere mapping and orientation of the molecular linkage map of rice (Oryza sativa L.) Proc Natl Acad Sci USA 93: 6163-6168 (1996).
34. Tsunematsu H, Yoshimura A, Harushima Y, Nagamura Y, Kurata N, Yano M, Sasaki T, Iwata N: RFLP framework map using recombinant inbred lines in rice. Breed Sci 46: 279-284 (1996).
35. Yano M, Okuno K, Satoh H, Omura T: Chromosomal location of genes conditioning low amylose content of endosperm starches in rice, Oryza sativa. Theor Appl Genet 76: 183-189 (1988).
36. YuZH, McCouch SR, Kinoshita T, Sato S, Tanksley SD: Association of morphological and RFLP markers in rice (Oryza sativa L.). Genome 38: 566-574 (1995).