Nonlinear dynamic processes in an ensemble of photosynthetic reaction centers. Theory and experiment

Journal of Physical Chemistry B

Volumn 101, Issue 38, 1997, Pages 7612-7619

  Goushcha, Alexander O ^a   Kapoustina, Marina T ^b   Kharkyanen, Valery N ^b   Holzwarth, Alfred R ^a  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ENERGY CONVERSION   (Germany)

^b INSTITUTE OF PHYSICS   (Ukraine)

Author keywords

[No Author keywords available]

Indexed keywords

APPROXIMATION THEORY; BACTERIA; CONFORMATIONS; FREE ENERGY; LIGHT ABSORPTION; MARKOV PROCESSES; MATHEMATICAL MODELS; MOLECULAR STRUCTURE; PHOTOSYNTHESIS; PROTEINS;

KOLMOGOROV EQUATIONS; PHOTOSYNTHETIC REACTION CENTERS;

MOLECULAR DYNAMICS;

EID: 0031234905     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp970868k     Document Type: Article

References (45)

1. Deisenhofer, J.; Epp, O.; Sinning, I. Michel, H. J. Mol. Biol. 1995, 246, 429.
2. Allen, J. P.; Feher, G.; Yeates, T. O.; Rees, D. C.; Deisenhofer, J.; Michel, H.; and Huber, R. Proc. Natl. Acad. Sci. U.S.A. 1986, 83, 8589.
3. Treutlein, H.; Schulten, K.; Brunger, A. T.; Karplus. M.; Deisenhofer, J.; Michel, H. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 75.
4. Schulten, K.; Tesch, M. Chem. Phys. 1991, 158, 421.
5. Shaitan, K. V.; Uporov, V.; Lukashev, E. P.; Kononenko, A. A.; Rubin, A. B. Mol. Biol. (Moscow) 1991, 25, 695.
6. Yruela, I.; Churio, M.; Geusch, T.; Braslavsky, S.; Holzwarth, A. J. Phys. Chem. 1994, 98, 12789.
7. Stowell, M. H. B.; McPhillips, T. M.; Rees, D. C.; Soltis, S. M.; Abresch, E. C.; Feher, G. Science 1997, 276, 812.
8. Gardiner, C. W. Handbook of Stochastic Methods: Springer-Verlag: Berlin, 1985.
9. Haken, H. Synergetics - An Introduction; Springer-Verlag: Berlin, 1978.
10. Glansdorf, P.; Prigogine, I. Thermodynamics Theory of Structure, Stability and Fluctuations; Wiley: London, 1971.
11. Nicolis, G.; Prigogine, I. Selforganization in Nonequilibrium Systems; Wiley: New York, 1977.
12. Gushcha, A.; Dobrovolskii, A.; Kapoustina, M.; Privalko, A.; Kharkyanen, V. Phys. Lett. 1994. A191, 393.
13. Goushcha, A.; Kapoustina, M.; Kharkyanen, V. J. Biol. Phys. 1994, 19, 273.
14. Christoforov, L. Phys. Lett. 1995, A205, 14.
15. Chinarov, V. A.; Gaididei, Yu. B.; Kharkyanen, V. N.; Sit'ko, S. P. Phys. Rev. 1992, A46, 5232.
16. Dobrovolskii, A.; Filippov, A.; Goushcha, A.; Privalko, A.; Kharkyanen, V. J. Biol. Phys. 1994, 19, 285.
17. Goushcha, A.; Kharkyanen, V.; Holzwarth, A. J. Phys. Chem. 1997, 101, 259.
18. Dobrovolskii, A.; Filippov, A.; Goushcha, A.; Kapoustina, M.; Karataev, V.; Privalko, A.; Kharkyanen, V. J. Biol. Phys. 1995, 21, 265.
19. Goushcha, A.; Berezetska, N.; Kapoustina, M.; Kharkyanen, V. J. Biol. Phys. 1996, 22, 113.
20. Goushcha, A. O.; Bösinger, C. S.; Kharkyanen, V. N.; Holzwarth, A. R. J. Phys. Chem., submitted.
21. Risken, H. The Fokker-Planck Equation; Springer: Berlin, 1984.
22. Gardiner, C. W. Handbook of Stochastic Methods for Physics, Chemistry and the natural sciences; Springer-Verlag: Berlin, 1985.
23. Feller, W. An introduction to probability theory and its applications, 2nd ed.; Wiley: New York, 1974.
24. Puchenkov, O. V.; Kopf, Z.; Malkin, S. Biochim. Biophys. Acta. 1995, 1231, 197.
25. Kleinfeld, D.; Okamura, M. Y.; Feher, G. Biochemistry 1984, 23, 5780.
26. Malkin, S.; Churio, M. S.; Shochat, S.; Braslavsky, S. E. J. Photochem. Photobiol. 1994, 23, 79.
27. Mauzerall, D. C.; Gunner, M. R.; Zhang, J. M. Biophys. J. 1995, 68, 275.
28. Marcus, R. A. J. Chem. Phys. 1956, 24, 966.
29. Marcus, R. A.; Sutin, N. Biochim. Biophys. Acta 1985, 811, 265.
30. Agmon, N.; Hopfield, J. J. J. Chem. Phys. 1983, 78, 6947.
31. Haken, H.; Light. Vol. 2. Laser Light Dynamics; North-Holland: Amsterdam, 1985.
32. Nienhaus, G. U.; Mourant, J. R.; Frauenfelder, H. Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 2902.
33. Schoepp, B.; Parot, P.; Lavorel, J.; Vermeglio, A. In The Photosynthetic Bacterial Reaction Center II; Breton, J., Vermeglio, A., Eds. Plenum Press: New York, 1992; pp 331-339.
34. Wraight, C. A. Biochim. Biophys. Acta 1979, 459, 309.
35. Kleinfeld, D.; Okamura, M. Y.; Feher, G. Biochim. Biophys. Acta. 1984, 766, 126.
36. McComb, J. C.; Stein, R. R.; Wraight, C. A. Biochim. Biophys. Acta 1990, 1015, 156.
37. Beroza, P.; Fredkin, D. R.; Okamura, M. Y.; Feher, G. Proc. Natl. Acad. Sci. U.S.A. 1991, 88, 5804.
38. Beroza, P.; Fredkin, D. R.; Okamura, M. Y.; Feher, G. Biophys. J. 1995, 68, 2233.
39. Gao, J.-L.; Shopes, R. J.; Wraight, C. A. Biochim. Biophys. Acta. 1991, 1056, 259.
40. Okamura, M. Y.; Feher, G. Annu. Rev. Biochem. 1992, 61, 861.
41. Wraight, C. A. Isr. J. Chem. 1981, 21, 348.
42. Nonella, M.; Schulten, K. J. Phys.Chem. 1991, 95, 2059.
43. Zusman, L. D. Chem. Phys. 1980, 49, 295.
44. Müller, M. G.; Griebenow, K.; Holzwarth, A. R. Chem. Phys. Lett. 1992, 199, 465.
45. A binding pocket.