메뉴 건너뛰기




Volumn 4, Issue 8, 1997, Pages 595-605

Surprising fidelity of template-directed chemical ligation of oligonucleotides

Author keywords

Chemical ligation; G A Mismatch; In vitro selection; Origins of life; Self replication

Indexed keywords


EID: 0031215115     PISSN: 10745521     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1074-5521(97)90245-3     Document Type: Article
Times cited : (37)

References (40)
  • 1
    • 0017232521 scopus 로고
    • Coenzymes of fossils of an earlier metabolic state
    • White III, H.B. (1976). Coenzymes of fossils of an earlier metabolic state. J. Mol. Evol. 7, 101-104.
    • (1976) J. Mol. Evol. , vol.7 , pp. 101-104
    • White III, H.B.1
  • 2
    • 0017855377 scopus 로고
    • Bioorganic chemistry and the origin of life
    • Visser, C.M. & Kellogg, R.M. (1978). Bioorganic chemistry and the origin of life. J. Mol. Evol. 11, 163-169.
    • (1978) J. Mol. Evol. , vol.11 , pp. 163-169
    • Visser, C.M.1    Kellogg, R.M.2
  • 4
    • 0345025242 scopus 로고    scopus 로고
    • (Brack, A., ed.), University of Cambridge Press, Cambridge, UK, in press
    • James, K.D. & Ellington, A.D. (1997). In The Molecular Origins of Life (Brack, A., ed.), University of Cambridge Press, Cambridge, UK, in press.
    • (1997) The Molecular Origins of Life
    • James, K.D.1    Ellington, A.D.2
  • 5
    • 0026634324 scopus 로고
    • Molecular replication
    • Orgel, L.E. (1992). Molecular replication. Nature 358, 203-209.
    • (1992) Nature , vol.358 , pp. 203-209
    • Orgel, L.E.1
  • 6
    • 0020370504 scopus 로고
    • Oligomerization of (guanosine 5′-phosphor)-2-methylimidazolide on poly(C). An RNA polymerase model
    • Inoue, T. & Orgel, L.E. (1982). Oligomerization of (guanosine 5′-phosphor)-2-methylimidazolide on poly(C). An RNA polymerase model. J. Mol. Biol. 162, 201-217.
    • (1982) J. Mol. Biol. , vol.162 , pp. 201-217
    • Inoue, T.1    Orgel, L.E.2
  • 7
    • 0020664144 scopus 로고
    • A nonenzymatic RNA polymerase model
    • Inoue, T. & Orgel, L.E. (1983). A nonenzymatic RNA polymerase model. Science 219, 859-862.
    • (1983) Science , vol.219 , pp. 859-862
    • Inoue, T.1    Orgel, L.E.2
  • 8
    • 0021770899 scopus 로고
    • Template-directed synthesis on the pentanucleotide CpCpGpCpC
    • Inoue, T., et al., & Reese, C.B. (1984). Template-directed synthesis on the pentanucleotide CpCpGpCpC. J. Mol. Biol. 178, 669-676.
    • (1984) J. Mol. Biol. , vol.178 , pp. 669-676
    • Inoue, T.1    Reese, C.B.2
  • 9
    • 0021770666 scopus 로고
    • Non-enzymatic template-directed synthesis on RNA random copolymers. Poly(C, U) templates
    • Joyce, G.F., Inoue, T. & Orgel, L.E. (1984). Non-enzymatic template-directed synthesis on RNA random copolymers. Poly(C, U) templates. J. Mol. Biol. 176, 279-306.
    • (1984) J. Mol. Biol. , vol.176 , pp. 279-306
    • Joyce, G.F.1    Inoue, T.2    Orgel, L.E.3
  • 10
    • 0023042024 scopus 로고
    • Non-enzymic template-directed synthesis on RNA random copolymers. Poly(C, G) templates
    • Joyce, G.F. & Orgel, L.E. (1986). Non-enzymic template-directed synthesis on RNA random copolymers. Poly(C, G) templates. J. Mol. Biol. 188, 433-441.
    • (1986) J. Mol. Biol. , vol.188 , pp. 433-441
    • Joyce, G.F.1    Orgel, L.E.2
  • 11
    • 0024278974 scopus 로고
    • Non-enzymatic template-directed synthesis on RNA random copolymers. Poly(C, A) templates
    • Joyce, G.F. & Orgel, L.E. (1988). Non-enzymatic template-directed synthesis on RNA random copolymers. Poly(C, A) templates. J. Mol. Biol. 202, 677-681.
    • (1988) J. Mol. Biol. , vol.202 , pp. 677-681
    • Joyce, G.F.1    Orgel, L.E.2
  • 12
    • 84985534863 scopus 로고
    • A self-replicating hexadeoxynucleotide
    • von Kiedrowski, G. (1986). A self-replicating hexadeoxynucleotide. Angew. Chem. Int. Ed. Engl. 25, 932-935.
    • (1986) Angew. Chem. Int. Ed. Engl. , vol.25 , pp. 932-935
    • Von Kiedrowski, G.1
  • 13
    • 33748222498 scopus 로고
    • Parabolic growth of a self-replicating hexadeoxynucleotide bearing a 3′-5′-phosphoamidate linkage
    • von Kiedrowski, G., Wlotzka, B., Helbing, J., Matzen, M. & Jordan, S. (1991). Parabolic growth of a self-replicating hexadeoxynucleotide bearing a 3′-5′-phosphoamidate linkage. Angew. Chem. Int. Ed. Engl. 30, 423-426.
    • (1991) Angew. Chem. Int. Ed. Engl. , vol.30 , pp. 423-426
    • Von Kiedrowski, G.1    Wlotzka, B.2    Helbing, J.3    Matzen, M.4    Jordan, S.5
  • 14
    • 0028306647 scopus 로고
    • Self-replication of complementary nucleotide-based oligomers
    • Sievers, D. & von Kiedrowski, G. (1994). Self-replication of complementary nucleotide-based oligomers. Nature 369, 221-224.
    • (1994) Nature , vol.369 , pp. 221-224
    • Sievers, D.1    Von Kiedrowski, G.2
  • 15
    • 0021200412 scopus 로고
    • Chiral selection in poly(C)-directed synthesis of oligo(G)
    • Joyce, G.F., et al., & van Westrenen, J. (1984). Chiral selection in poly(C)-directed synthesis of oligo(G). Nature 310, 602-604.
    • (1984) Nature , vol.310 , pp. 602-604
    • Joyce, G.F.1    Van Westrenen, J.2
  • 16
    • 0028364362 scopus 로고
    • In vitro selection of optimal DNA substrates for ligation by a water-soluble carbodiimide
    • Harada, K. & Orgel, L.E. (1994). In vitro selection of optimal DNA substrates for ligation by a water-soluble carbodiimide. J. Mol. Evol. 38, 558-560.
    • (1994) J. Mol. Evol. , vol.38 , pp. 558-560
    • Harada, K.1    Orgel, L.E.2
  • 17
    • 0024195317 scopus 로고
    • Template-directed synthesis of acyclic oligonucleotide analogues
    • Visscher, J. & Schwartz, A.W. (1988). Template-directed synthesis of acyclic oligonucleotide analogues. J. Mol. Evol. 28, 3-6.
    • (1988) J. Mol. Evol. , vol.28 , pp. 3-6
    • Visscher, J.1    Schwartz, A.W.2
  • 18
    • 0026537060 scopus 로고
    • Why pentose- and not hexosenucleic acids? Introduction to the problem, conformational analysis of oligonucleotide single strands containing 2′, 3′-dideoxyglucopyranosyl building blocks ('homo-DNA'), and reflections on the conformation of A- and B-DNA
    • Eschenmoser, A. & Dobler, M. (1992). Why pentose- and not hexosenucleic acids? Introduction to the problem, conformational analysis of oligonucleotide single strands containing 2′, 3′-dideoxyglucopyranosyl building blocks ('homo-DNA'), and reflections on the conformation of A- and B-DNA. Helv. Chim. Acta 75, 218-259.
    • (1992) Helv. Chim. Acta , vol.75 , pp. 218-259
    • Eschenmoser, A.1    Dobler, M.2
  • 19
    • 0029160308 scopus 로고
    • Template switching between PNA and RNA oligonucleotides
    • Bohler, C., Nielsen, P.E. & Orgel, L.E. (1995). Template switching between PNA and RNA oligonucleotides. Nature 376, 578-581.
    • (1995) Nature , vol.376 , pp. 578-581
    • Bohler, C.1    Nielsen, P.E.2    Orgel, L.E.3
  • 20
    • 0027772290 scopus 로고
    • Experimental testing of theories of an early RNA world
    • Ellington, A.D. (1993). Experimental testing of theories of an early RNA world. Methods Enzymol. 224, 646-664.
    • (1993) Methods Enzymol. , vol.224 , pp. 646-664
    • Ellington, A.D.1
  • 21
    • 0029414939 scopus 로고
    • The search for missing links between self-replicating nucleic acids and the RNA world
    • James, K.D. & Ellington, A.D. (1995). The search for missing links between self-replicating nucleic acids and the RNA world. Orig. Life Evol. Biosph. 25, 515-530.
    • (1995) Orig. Life Evol. Biosph. , vol.25 , pp. 515-530
    • James, K.D.1    Ellington, A.D.2
  • 22
    • 0030611061 scopus 로고    scopus 로고
    • Pyranosyl-RNA: Chiroselective self-assembly of base sequences by ligative oligomerization of tetranucleotide-2′,3′-cyclophosphates (with a commentary concerning the origin of biomolecular homochirality)
    • Bolli, M., Micura, R. & Eschenmoser, A. (1997). Pyranosyl-RNA: chiroselective self-assembly of base sequences by ligative oligomerization of tetranucleotide-2′,3′-cyclophosphates (with a commentary concerning the origin of biomolecular homochirality). Chem. Biol. 4, 309-320.
    • (1997) Chem. Biol. , vol.4 , pp. 309-320
    • Bolli, M.1    Micura, R.2    Eschenmoser, A.3
  • 24
    • 0025760436 scopus 로고
    • The use of BrCN for assembling modified DNA duplexes and DNA-RNA hybrids; comparison with water-soluble carbodiimide
    • Dolinnaya, N.G., Sokolova, N.I., Ashirbekova, D.T. & Shabarova, Z.A. (1991). The use of BrCN for assembling modified DNA duplexes and DNA-RNA hybrids; comparison with water-soluble carbodiimide. Nucleic Acids Res. 19, 3067-3072.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 3067-3072
    • Dolinnaya, N.G.1    Sokolova, N.I.2    Ashirbekova, D.T.3    Shabarova, Z.A.4
  • 25
    • 0025879406 scopus 로고
    • Chemical ligation of DNA: The first non-enzymatic assembly of a biologically active gene
    • Shabarova, ZA., et al., & Bogdanov, A.A. (1991). Chemical ligation of DNA: the first non-enzymatic assembly of a biologically active gene. Nucleic Acids Res. 19, 4247-4251.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 4247-4251
    • Shabarova, Z.A.1    Bogdanov, A.A.2
  • 26
    • 0027379749 scopus 로고
    • Oligonucleotide circularization by template-directed chemical ligation
    • Dolinnaya, N.G., et al., & Shabarova, Z.A. (1993). Oligonucleotide circularization by template-directed chemical ligation. Nucleic Acids Res. 21, 5403-5407.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 5403-5407
    • Dolinnaya, N.G.1    Shabarova, Z.A.2
  • 27
    • 0023052459 scopus 로고
    • Template-directed polymerization of oligoadenylates using cyanogen bromide
    • Kanaya, E. & Yanagawa, H. (1986). Template-directed polymerization of oligoadenylates using cyanogen bromide. Biochemistry 25, 7423-7430.
    • (1986) Biochemistry , vol.25 , pp. 7423-7430
    • Kanaya, E.1    Yanagawa, H.2
  • 28
    • 0024799075 scopus 로고
    • Nonenzymatic ligation of oligodeoxyribonucleotides on a duplex DNA template by triple-helix formation
    • Luebke, K.J. & Dervan, P.B. (1989). Nonenzymatic ligation of oligodeoxyribonucleotides on a duplex DNA template by triple-helix formation. J. Am. Chem. Soc. 111, 8733-8735.
    • (1989) J. Am. Chem. Soc. , vol.111 , pp. 8733-8735
    • Luebke, K.J.1    Dervan, P.B.2
  • 29
    • 0028242115 scopus 로고
    • Chemical self-replication of palindromic duplex DNA
    • Li, T. & Nicolaou, K.C. (1994). Chemical self-replication of palindromic duplex DNA. Nature 369, 218-221.
    • (1994) Nature , vol.369 , pp. 218-221
    • Li, T.1    Nicolaou, K.C.2
  • 30
    • 0029037839 scopus 로고
    • Convergent DNA synthesis: A non-enzymatic dimerization approach to circular oligodeoxynucleotides
    • Rubin, E., Rumney, ST., Wang, S. & Kool, ET. (1995). Convergent DNA synthesis: a non-enzymatic dimerization approach to circular oligodeoxynucleotides. Nucleic Acids Res. 23, 3547-3553.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 3547-3553
    • Rubin, E.1    Rumney, S.T.2    Wang, S.3    Kool, E.T.4
  • 31
    • 0029968822 scopus 로고    scopus 로고
    • Improved nearest-neighbor parameters for predicting DNA duplex stability
    • SantaLucia, J., Allawi, H.T. & Seneviratne, P.A. (1996). Improved nearest-neighbor parameters for predicting DNA duplex stability. Biochemistry 35, 3555-3562.
    • (1996) Biochemistry , vol.35 , pp. 3555-3562
    • Santalucia, J.1    Allawi, H.T.2    Seneviratne, P.A.3
  • 32
    • 0021754242 scopus 로고
    • Deoxyguanosine-deoxyadenosine pairing in the d(C-G-A-G-A-A-T-T-C-G-C-G) duplex: Conformation and dynamics at and adjacent to the dG:dA mismatch site
    • Patel, D.J., Kozlowski, S.A., Ikuta, S. & Itakura, K. (1984). Deoxyguanosine-deoxyadenosine pairing in the d(C-G-A-G-A-A-T-T-C-G-C-G) duplex: conformation and dynamics at and adjacent to the dG:dA mismatch site. Biochemistry 23, 3207-3217.
    • (1984) Biochemistry , vol.23 , pp. 3207-3217
    • Patel, D.J.1    Kozlowski, S.A.2    Ikuta, S.3    Itakura, K.4
  • 33
    • 0027053086 scopus 로고
    • Selection of a ribozyme that functions as a superior template in a self-copying reaction
    • Green, R. & Szostak, J.W. (1992). Selection of a ribozyme that functions as a superior template in a self-copying reaction. Science 258, 1910-1915.
    • (1992) Science , vol.258 , pp. 1910-1915
    • Green, R.1    Szostak, J.W.2
  • 34
    • 0029037713 scopus 로고
    • A DNA metalloenzyme with DNA ligase activity
    • Cuenoud, B. & Szostak, J.W. (1995). A DNA metalloenzyme with DNA ligase activity. Nature 375, 611-614.
    • (1995) Nature , vol.375 , pp. 611-614
    • Cuenoud, B.1    Szostak, J.W.2
  • 35
    • 0027057737 scopus 로고
    • DNA sequencing by primer walking with strings of contiguous hexamers
    • Kieleczawa, J., Dunn, J.J. & Studier, F.W. (1992). DNA sequencing by primer walking with strings of contiguous hexamers. Science 258, 1787-1791.
    • (1992) Science , vol.258 , pp. 1787-1791
    • Kieleczawa, J.1    Dunn, J.J.2    Studier, F.W.3
  • 37
    • 0028114541 scopus 로고
    • Molecular computation of solutions to combinatorial problems
    • Adleman, L.M. (1994). Molecular computation of solutions to combinatorial problems. Science 266, 1021-1024.
    • (1994) Science , vol.266 , pp. 1021-1024
    • Adleman, L.M.1
  • 38
    • 0029278612 scopus 로고
    • DNA solution of hard computational problems
    • Lipton, R.J. (1995). DNA solution of hard computational problems. Science 268, 542-545.
    • (1995) Science , vol.268 , pp. 542-545
    • Lipton, R.J.1
  • 39
    • 0030091966 scopus 로고    scopus 로고
    • Molecular computing: Does DNA compute?
    • Rozen, D.E., McGrew, S. & Ellington, A.D. (1996). Molecular computing: does DNA compute? Curr. Biol. 6, 254-257.
    • (1996) Curr. Biol. , vol.6 , pp. 254-257
    • Rozen, D.E.1    McGrew, S.2    Ellington, A.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.