Evidence for transcriptional regulation of plastid photosynthesis genes in Arabidopsis thaliana roots

Plant Physiology

Volumn 114, Issue 2, 1997, Pages 623-630

  Isono, Kyoichi ^a,b   Niwa, Yasuo ^a   Satoh, Kimiyuki ^b   Kobayashi, Hirokazu ^a,b  

^a UNIVERSITY OF SHIZUOKA   (Japan)

^b NATIONAL INSTITUTE FOR BASIC BIOLOGY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CELL DNA; DIGESTION; DNA MODIFICATION; ESCHERICHIA COLI; GENE ENCODING; GENE EXPRESSION REGULATION; ISOSCHIZOMERIC ENDONUCLEASE; MOLECULAR CLONING; OPERON; PHOTOSYNTHESIS; PHOTOSYSTEM II; PLASTID; POLYMERASE CHAIN REACTION; RIBOSOMAL RNA; RIBULOSE 1,5 BIPHOSPHATE CARBOXYLASE; RIBULOSE 1,5 BIPHOSPHATE OXYGENASE; RNA POLYMERASE;

ARABIDOPSIS THALIANA;

EID: 0031153933     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.114.2.623     Document Type: Article

References (41)

1. Aguettaz P, Seyer P, Pesey H, Lescure A-M (1987) Relations between the plastid gene dosage and the levels of 16S rRNA and rbcL gene transcripts during amyloplast to chloroplast change in mixotrophic spinach cell. Plant Mol Biol 8: 169-177
2. Allison LA, Simon LD, Maliga P (1996) Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants. EMBO J 15: 2802-2809
3. Baumgartner BJ, Rap JC, Mullet JE (1989) Plastid transcription activity and DNA copy number increases early in barley chloroplast development. Plant Physiol 89: 1011-1018
4. Berry JO, Breiding DE, Klessig DF (1990) Light-mediated control of transcriptional initiation of ribulose-1,5-bisphosphate carboxylase in Amaranth cotyledons. Plant Cell 2: 795-803
5. Blowers AD, Klein U, Ellmore GS, Bogorad L (1993) Functional in vivo analyses of the 3′ flanking sequences of the Chlamydomonas chloroplast rbcL and psaB genes. Mol Gen Genet 283: 339-349
6. Bülow S, Link G (1988) Sigma-like activity from mustard (Sinapis alba L.) chloroplasts conferring DNA-binding and transcription specificity to E. coli core RNA polymerase. Plant Mol Biol 10: 349-357
7. Chory J, Peto CA (1990) Mutations in the DET1 gene affect cell-type-specific expression of light-regulated genes and chloroplast development in Arabidopsis. Proc Natl Acad Sci USA 87: 8776-8780
8. Deng X-W, Gruissem W (1987) Control of plastid gene expression during development: the limited role of transcriptional regulation. Cell 49: 379-387
9. Deng X-W, Gruissem W (1988) Constitutive transcription and regulation of gene expression in non-photosynthetic plastids of higher plants. EMBO J 7: 3301-3308
10. Gausing K (1977) Regulation of ribosome production in Escherichia coli: synthesis and stability of ribosomal RNA and of ribosomal protein mRNA at different growth rates. J Mol Biol 115: 335-354
11. Greenberg BM, Narita JO, DeLuca-Flaherty CR, Gruissem W, Rushlow KA, Hallick RB (1984) Evidence for two RNA polymerase activities in Euglena gracilis chloroplasts. J Biol Chem 259: 14880-14887
12. Greenberg BM, Narita JO, DeLuca-Flaherty,CR, Hallick RB (1985) Properties of chloroplast RNA polymerases. In KE Steinback, S Bunita, CJ Arntzen, L Bogorad, eds, Molecular Biology of the Photosynthetic Apparatus. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp 303-309
13. Gruissem W, Barkan A, Deng X-W, Stern D (1988) Transcriptional and post-transcriptional control of plastid mRNA levels in higher plants. Trends Genet 4: 258-263
14. Hayes R, Kudla J, Schuster G, Gabay L, Maliga P, Gruissem W (1996) Chloroplast mRNA 3′-end processing by a high molecular weight protein complex is regulated by nuclear encoded RNA binding proteins. EMBO J 15: 1132-1141
15. Klein RR, Mullet JE (1990) Light-induced transcription of chloroplast genes: psbA transcription is differentially enhanced in illuminated barley. J Biol Chem 265: 1895-1902
16. Kobayashi H (1991) Differentiation of amyloplasts and chromoplasts. In L Bogorad, IK Vasil, eds, The Photosynthetic Apparatus: Molecular Biology and Operation (Cell Culture and Somatic Cell Genetics of Plants, Vol 7B). Academic Press, San Diego, CA, pp 395-415
17. Kobayashi H, Ngernprasirtsiri J, Akazawa T (1990) Transcriptional regulation and DNA methylation in plastids during transitional conversion of chloroplasts to chromoplasts. EMBO J 9: 307-313
18. Kwok SF, Piekos B, Misera S, Deng X-W (1996) A complement of ten essential and pleiotropic Arabidopsis COP/DET/FUS genes is necessary for repression of photomorphogenesis in darkness. Plant Physiol 110: 731-742
19. Lam E, Chua N-H (1987) Chloroplast DNA gyrase and in vitro regulation of transcription by template topology and novobiocin. Plant Mol Biol. 8: 415-424
20. Maier RM, Neckermann K, Igloi GL, Kössel H (1995) Complete sequence of the maize chloroplast genome: gene content, hotspots of divergence and fine tuning of genetic information by transcript editing. J Mol Biol 251: 614-628
21. Marano MR, Carrillo N (1991) Chromoplast formation during tomato fruit ripening: no evidence for plastid DNA methylation. Plant Mol Biol 16: 11-19
22. Mayfield SP, Yohn CB, Cohen A, Danon A (1995) Regulation of chloroplast gene expression. Annu Rev Plant Physiol Plant Mol Biol 46: 147-166
23. Mullet JE, Klein RR (1987) Transcription and RNA stability are important determinants of higher plant chloroplast RNA levels. EMBO J 6: 1571-1579
24. Ngernprasirtsiri J, Kobayashi H, Akazawa T (1988) DNA methylation as a mechanism of transcriptional regulation in nonpho- tosynthetic plastids in plant cells. Proc Natl Acad Sci USA 85: 4750-4754
25. Ngernprasirtsiri J, Kobayashi H, Akazawa T (1990) Expression of photosynthetic genes is distinctly different between chloroplasts and amyloplasts in the liquid-cultured cells of Sycamore (Acer Pseudoplatanus L.). Cell Struct Funct 15: 273-283
26. Piechulla B, Imlay KRC, Gruissem W (1985) Plastid gene expression during fruit ripening in tomato. Plant Mol Biol 5: 373-384
27. Piechulla B, Pichersky E, Cashmore AR, Gruissem W (1986) Expression of nuclear and plastid genes for photosynthesis-specific proteins during tomato fruit development and ripening. Plant Mol Biol 7: 367-376
28. Rapp JC, Mullet JE (1991) Chloroplast transcription is required to express the nuclear gene rbcS and cab: plastid DNA copy number is regulated independently. Plant Mol Biol 17: 813-823
29. Rodermel SR, Bogorad L (1985) Maize plastid photogenes: mapping and photoregulation of transcript levels during light-induced development. J Cell Biol 100: 463-476
30. Rogers SO, Bendich AJ (1985) Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues. Plant Mol Biol 5: 69-76
31. Salvador ML, Klein U, Bogorad L (1993) 5′ Sequences are important positive and negative determinants of the longevity of Chlamydomonas chloroplast gene transcripts. Proc Natl Acad Sci USA 90: 1556-1560
32. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, Ed 2, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
33. Schrubar H, Wanner G, Westhoff P (1990) Transcriptional control of plastid gene expression in greening Sorghum seedlings. Planta 183: 101-111
34. Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, and others (1986) The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression. EMBO J 5: 2043-2049
35. Stern DB, Gruissem W (1987) Control of plastid gene expression: 3′ inverted repeats act as mRNA processing and stabilizing elements, but do not terminate transcription. Cell 51: 1145-3157
36. Stern DB, Jones H, Gruissem W (1989) Function of plastid mRNA 3′ inverted repeats: RNA stabilization and gene-specific protein binding. J Biol Chem 264: 18742-18750
37. Stirdivant SM, Crossland LD, Bogorad L (1985) DNA supercoiling affects in vitro transcription of two maize chloroplast genes differently. Proc Natl Acad Sci USA 82: 4886-4890
38. Thompson RJ, Mosig G (1987) Stimulation of a Chlamydomonas chloroplast promoter by novobiocin in situ and E. coli implies regulation by torsional stress in the chloroplast DNA. Cell 48: 281-287
39. Tiller K, Link G (1993) Phosphorylation and dephosphorylation affect functional characteristics of chloroplast and etioplast transcription systems from mustard (Sinapis alba L). EMBO J 12: 1745-1753
40. Valvekens D, Van Montagu M, Van Lijsebettens M (1988) Agrobacterium tumefacieus-mediated transformation of Arabidopsis root expiants using kanamycin selection. Proc Natl Acad Sci USA 85: 5536-5540
41. Yang J, Schuster G, Stern DB (1996) CSP41, a sequence-specific chloroplast mRNA binding protein, is an endonuclease. Plant Cell 8: 1409-1420