Construction of a 5-Mb YAC contig from the putative 10q25 tumor- suppressor region for glioblastomas

Genomics

Volumn 41, Issue 3, 1997, Pages 345-349

  Albarosa, R ^a   Finocchiaro, G ^a,c   Chiariello, E ^a   Russo, G ^a   Susani, L ^b   Vezzoni, P ^b   Zucchi, I ^b  

^a DEPARTMENT OF NEUROSURGERY   (Italy)

^b CNR   (Italy)

^c Divisione di Biochimica e Genetica   (Italy)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BRAIN TUMOR; CHROMOSOME 10; CHROMOSOME SATELLITE; DNA FINGERPRINTING; GENE DELETION; GLIOBLASTOMA; PRIORITY JOURNAL; TUMOR GROWTH; TUMOR SUPPRESSOR GENE; YEAST;

EID: 0031149557     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1006/geno.1997.4664     Document Type: Article

References (20)

1. Albarosa, R., Colombo, B. M., Roz, L., Magnani, I., Pollo, B., Cirenei, N., Giani, C., Fuhrman Conti, A. M., DiDonato, S., and Finocchiaro, G. (1996). Deletion mapping of gliomas suggests the presence of two small regions for candidate tumor suppressor genes in a 17 cM interval on chromosome 10q. Am. J. Hum. Genet. 58: 1260-1267.
2. Cohen, D., Chumakov, I., and Weissenbach, J. (1993). A first-generation physical map of the human genome. Nature 366: 698-701.
3. Green, E. D., Mohr, R. M., Idol, J. R., Jones, M., Buckingham, J. M., Deaven, L. L., Moyzis, R. K., and Olson, M. V. (1991). Systematic generation of sequence-tagged sites for physical mapping of human chromosomes: Application to the mapping of human chromosome 7 using yeast artificial chromosomes. Genomics 11: 548-564.
4. Gyapay, G., Morissette, J., Vignal, A., Dib, C., Fizames, C., Millasseau, P., Marc, S., Bernardi, G., Lathrop, M., and Weissenbach, J. (1994). The 1993-94 Genethon human genetic linkage map. Nature Genet. 7: 246-339.
5. Herbst, R. A., Weiss, J., Ehnis, A., Cavenee, W. K., and Arden, K. C. (1994). Loss of heterozygosity for 10q22-10qter in malignant melanoma progression. Cancer Res. 54: 3111-3114.
6. Kere, J., Nagaraja, R., Mumm, S., Ciccodicola, A., D'Urso, M., and Schlessinger, D. (1992). Mapping human chromosomes by walking with sequence-tagged sites from end-fragments of yeast artificial chromosomes inserts. Genomics 14: 241-248.
7. Lang, F. F., Miller, D. C., Koslow, M., and Newcomb, E. W. (1994). Pathways leading to glioblastoma multiforme: A molecular analysis of genetic alterations in 65 astrocytic tumors. J. Neurosurg. 81: 427-436.
8. Lovett, M. (1994). Direct selection of cDNAs using genomic contigs. In "Current Protocols in Human Genetics," unit 6.3.
9. Magnani, I., Guarneri, S., Pollo, B., Cirenei, N., Colombo, B. M., Broggi, G., Galli, C., Bugiani, O., DiDonato, S., Finocchiaro, G., and Fuhrman Conti, A. M. (1994). Increasing complexity of the karyotype in 50 human gliomas: Progressive evolution and de novo occurrence of cytogenetic alterations. Cancer Genet. Cytogenet. 75: 77-89.
10. Morita, R., Saito, S., Ishikawa, J., Ogawa, O., Yoshida, O., Yamakawa, K., and Nakamura, Y. (1991). Common regions of deletion on chromosomes 5q, 6q and 10q in renal cell carcinoma. Cancer Res. 51: 5817-5820.
11. Moschonas, N. K., Spurr, N. K., and Mao, J. (1996). Report of the First International Workshop on Human Chromosome 10 Mapping 1995. Cytogenet. Cell Genet. 72: 99-112.
12. Nagaraja, R., Kere, J., MacMillan, S., Masisi, M. W. J., Johnson, D., Halley, G., Molini, B. A., Wein, K., Trusgnich, M., Ebel, B., Browstein, B. H., Railey, B., and Schlessinger, D. (1994). Characterization of four human YAC libraries for clone size, chimerism, and X chromosome sequence representation. Nucleic Acids Res. 22: 3406-3411.
13. Nelson, D. L., Ledbetter, S.A., Corbo, L., Victoria, M. F., Ramirez-Solis, R., Webster, T. D., Ledbetter, D. H., and Caskey, C. T. (1989). Alu polymerase chain reaction: A method for rapid isolation of human-specific sequence from complex DNA sources. Proc. Natl. Acad. Sci. USA 86: 6686-6690.
14. Peiffer, S. L., Herzog, T. J., Tribune, D. J., Mutch, D. G., Gersell, D. J., and Goodefellow, P. J. (1995). Allelic loss of sequences from the long arm of chromosome 10 and replication errors in endometrial cancers. Cancer Res. 55: 1922-1926.
15. Porta, G., Zucchi, I., Hillier, L., Green, P., Nowotny, V., D'Urso, M., and Schlessinger, D. (1993). Alu and L1 sequence distribution in Xq24-q28, and their comparative utility in YAC contig assembly and verification. Genomics 16: 417-425.
16. Rasheed, B. K., McLendon, R. E., Friedman, H. S., Friedman, A. H., Fuchs, H. E., Bigner, D. D., and Bigner, S. H. (1995). Chromosome 10 deletion mapping in human gliomas: A common deletion region in 10q25. Oncogene 10: 2243-2245.
17. Rempel, S. A., Schwechheimer, K., Davis, R. L., Cavenee, W. K., and Rosenblum, M. L. (1993). Loss of heterozygosity for loci on chromosome 10 is associated with morphologically malignant meningioma progression. Cancer Res. 53: 2386-2392.
18. Speaks, S. L., Sanger, W. G., Masih, A. S., Harrington, D. S., Hess, M., and Armitage, J. O. (1992). Recurrent abnormalities of chromosome bands 10q23-25 in non-Hodgkin's lymphoma. Genes Chromosomes Cancer 5: 239-243.
19. Weissenbach, J., Gyapay, G., Dib, C., Vignal, A., Morissette, J., Millasseau, P., Vaysseix, G., and Lathrop, M. (1992). A second-generation linkage map of the human genome. Nature 359: 794-801.
20. Zucchi, I., and Schlessinger, D. (1992). Distribution of moderately repetitive sequences pTR5 and LF1 in Xq24-q28 human DNA and their use in assembling YAC contigs. Genomics 12: 264-275.