RAP-1 is an Arabidopsis MYC-like R protein homologue, that binds to G-box sequence motifs

Plant Molecular Biology

Volumn 34, Issue 1, 1997, Pages 169-174

  De Pater, Sylvia ^a,b   Pham, Khanh ^a   Memelink, Johan ^a,b   Kijne, Jan ^a  

^a LEIDEN UNIVERSITY   (Netherlands)

^b ROCKEFELLER UNIVERSITY   (United States)

Author keywords

Arabidopsis thaliana; bHLH domain; DNA binding; MYC like protein; R gene family

Indexed keywords

MYC PROTEIN; R SC PROTEIN, ZEA MAYS; R-SC PROTEIN, ZEA MAYS; TRANSACTIVATOR PROTEIN; VEGETABLE PROTEIN;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; BINDING SITE; CHEMISTRY; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ARABIDOPSIS; BASE SEQUENCE; BINDING SITES; MOLECULAR SEQUENCE DATA; PLANT PROTEINS; PROTO-ONCOGENE PROTEINS C-MYC; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID; TRANS-ACTIVATORS;

EID: 0031149426     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1005898823105     Document Type: Article

References (22)

1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 215: 403-10 (1990).
2. Blackwell TK, Weintraub H: Differences and similarities in DNA-binding preferences of MyoD and E2A protein complexes revealed by binding site selection. Science 250: 1104-1110 (1990).
3. Ellenberger T, Fass D, Arnaud M, Harrison SC: Crystal structure of transcription factor E47: E-box recognition by a basic region helix-loop-helix dimer. Genes Devel 8: 970-980 (1994).
4. Ferré-D'Amaré AR, Prendergast GC, Ziff EB, Burley SK: Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain. Nature 363: 38-45 (1993).
5. Genetics Computer Group: Program Manual for the Wisconsin Package, version 8 (1994).
6. Goff SA, Cone KC, Chandler VL: Functional analysis of the transcriptional activator encoded by the maize B gene: evidence for a direct functional interaction between two classes of regulatory proteins. Genes Devel 6: 864-875 (1992).
7. Kawagoe Y, Murai N: A novel basic region/helix-loop-helix protein binds to a G-box motif CACGTG of the bean seed storage protein β-phaseolin gene. Plant Sci 116: 47-57 (1996).
8. Koes RE, Quattrocchio F, Mol JNM: The flavonoid biosynthetic pathway in plant: function and evolution. BioEssays 16: 123-132 (1994).
9. Lister C, Dean C: Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J 4: 745-750 (1993).
10. Lloyd AM, Walbot V, Davis RW: Arabidopsis and Nicotiana anthocyanin production activated by maize regulators R and C1. Science 238: 1773-1775 (1992).
11. Ludwig SR, Bowen B, Beach L, Wessler SR: A regulatory gene as a novel visible marker for maize transformation. Science 247: 449-450 (1990).
12. Ludwig SR, Wessler SR: Maize R gene family: tissue-specific helix-loop-helix proteins. Cell 62: 849-851 (1990).
13. Memelink J, Swords KMM, Staehelin LA, Hoge JHC: Southern, Northern and Western blot analysis. In: Gelvin SB, Schilperoort RA (eds) Plant Molecular Biology Manual, F1: 1-23. Kluwer Academic Publishers, Dordrecht (1994).
14. Meshi T, Iwabuchi M: Plant transcription factors. Plant Cell Physiol 36: 1405-1420 (1995).
15. de Pater S, Katagiri F, Kijne J, Chua N-H: bZIP proteins bind to a palindromic sequence without an ACGT core located in a seed-specific element of the pea lectin promoter. Plant J 6: 133-140 (1994).
16. de Pater S, Pham K, Chua N-H, Memelink J, Kijne J: A 22-bp fragment of the pea lectin promoter containing essential TGAC-like motifs confers seed-specific gene expression. Plant Cell 5: 877-886 (1993).
17. de Pater S, Pham K, Memelink J, Kijne J: Binding specificity and tissue-specific expression pattern of the Arabidopsis bZIP transcription factor TGA2. Mol Gen Genet 250: 237-239 (1996).
18. Purugganan MD, Wessler SR: Molecular evolution of the plant R regulatory gene family. Genetics 138: 849-854 (1994).
19. Shieh MW, Wessler SR, Raikhel NV: Nuclear targeting of the maize R protein requires two nuclear localization sequences. Plant Physiol 101: 353-361 (1993).
20. Shirley BW, Kubasek WL, Storz G, Bruggemann E, Koornneef M, Ausubel FM, Goodman HM: Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis. Plant J 8: 659-671 (1995).
21. Tuerck JA, Fromm ME: Elements of the maize A1 promoter required for transactivation by the anthocyanin B/C1 or phlobaphene P regulatory genes. Plant Cell 6: 1655-1663 (1994).
22. Urao T, Yamaguchi-Shinozaki K, Mitsukawa N, Shibata D, Shinozaki K: Molecular cloning and characterization of a gene that encodes a MYC-related protein in Arabidopsis. Plant Mol Biol 32: 571-576 (1996).