Comparative Mapping of the Chicken Genome Using the East Lansing Reference Population

Poultry Science

Volumn 76, Issue 5, 1997, Pages 743-747

  Smith, Eugene J ^a   Lyons, Leslie A ^b   Cheng, Hans H ^a   Suchyta, Steven P ^a  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b NATIONAL CANCER INSTITUTE   (United States)

Author keywords

Comparative mapping; Genes; Linkage; Polymerase chain reaction; Synteny

Indexed keywords

GALLUS GALLUS;

DNA; GLOBIN;

ANIMAL; ANIMAL DISEASE; ARTICLE; CHEMISTRY; CHICKEN; CHROMOSOME MAP; COMPARATIVE STUDY; FEMALE; GENE AMPLIFICATION; GENETIC LINKAGE; GENETIC MARKER; GENETIC SELECTION; GENETICS; GENOME; HUMAN; MALE; MOUSE; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; UNITED STATES;

ANIMALS; BASE SEQUENCE; CHICKENS; CHROMOSOME MAPPING; DNA; FEMALE; GENE AMPLIFICATION; GENETIC MARKERS; GENOME; GLOBINS; HUMANS; LINKAGE (GENETICS); MALE; MICE; MICHIGAN; POLYMERASE CHAIN REACTION; SELECTION (GENETICS); SEQUENCE HOMOLOGY, NUCLEIC ACID;

EID: 0031134978     PISSN: 00325791     EISSN: None     Source Type: Journal    
DOI: 10.1093/ps/76.5.743     Document Type: Review

References (34)

1. Boehmelt, G., E. Ulrich, R. Kurzbauer, G. Mellitzer, A. Bird, and M. Zehnke, 1994. Structure and expression of the chicken retinoblastoma gene. Cell Growth Differ. 5: 221-230.
2. Burt, D. W., N. Bumstead, J. J. Bitgood, F. A. Ponce deLeon, and L. B. Crittenden, 1995. Chicken genome mapping: a new era in avian genetics. Trends Genet. 11:190-194.
3. Burt, D. W., C. T. Jones, D. R. Morrice, and I. R. Paton, 1996. Mapping the chicken genome - An aid to comparative studies. Page 105 in: XXVth International Conference on Animal Genetics. (Abstr.)
4. Cheng, H. H., I. Levin, R. L. Vallejo, H. Khatib, J. B. Dodgson, L. B. Crittenden, and J. Hillel, 1995. Development of a genetic map of the chicken with markers of high utility. Poultry Sci. 74:1855-1874.
5. Clemencia-Hernandez, M., L. Erkman, L. Matter-Sadzinski, T. Roztocil, M. Ballivet, and J. M. Matter, 1995. Characterization of the nicotinic acetylcholine receptor β3 gene. J. Biol. Chem. 270:3224-3233.
6. Crittenden, L. B., L. Provencher, L. Santangelo, I. Levin, H. Ablanalp, R. Briles, W. E. Briles, and J. Dodgson, 1993. Characterization of a Red Jungle Fowl Backcross reference population for molecular mapping of the chicken genome. Poultry Sci. 72:334-348.
7. Crittenden, L. B., J. Bitgood, and D. Burt, 1995. Genetic Nomenclature Guide Trends Genet. 11(Suppl.):33-34.
8. Crooijmans, R. P., P.A.M. van Oers, J. A. Strijk, J. J. van der Poel, and M.A.M. Groenen, 1996. Preliminary linkage map of the chicken (Gallus domesticus) genome based on microsatellite markers. Poultry Sci. 75:746-754.
9. Davis, M. O., D. J. Hata, D. Smith, and J. C. Walker, 1993. Cloning and sequence of a chicken alpha-N-acetylgalactosaminidase gene. Biochim. Biophys. Acta 1216:296-298.
10. Dolan, M., J. B. Dodgson, and J. D. Engel, 1983. Analysis of the adult chicken β-globin gene. J. Biol. Chem. 258:3983-3990.
11. Duncan, M. K., H. J. Roth, M. Thompson, M. Kantarow, and J. Piatigorsky, 1995. Chicken βB1 crystalline: gene sequence and evidence for functional conservation of promoter activity between chicken and mouse. Biochim. Biophys. Acta 1261:68-76.
12. Givol, I., P. L. Boyer, and S. H. Hughes, 1995. Isolation and characterization of the chicken c-sno gene. Gene 156: 271-276.
13. Hedges, S. B., 1994. Molecular evidence for the origin of birds. Proc. Natl. Acad. Sci. USA. 91:2621-2624.
14. Kaplan, M., D. I. Smith, and R. S. Sundick, 1993. Identification of a G-protein coupled receptor induced in activated T cells. J. Immunol. 151:628-638.
15. Li, H., J. Grenet, M. Valentine, J. M. Lahti, and V. Kidd, 1995. Structure and expression of chicken protein kinase PITSLRE-encoding genes. Gene 153:237-242.
16. Liu, L.-F., S.-H. Wu, and M. F. Tam, 1993. Nucleotide sequences of class alpha glutathione S-transferases from chicken liver. Biochim. Biophys. Acta 1216:332-334.
17. Machida, M., S. Toku, N. Kenmochi, and T. Tanaka, 1993. The structure of the gene encoding chicken ribosomal protein L37. Eur. J. Biochem. 213:77-80.
18. McQueen, H. A., J. Fantes, S. H. Cross, V. C. Clark, A. L. Archibald, and A. P. Bird, 1996. CpG islands of chicken are concentrated on microchromosomes. Nature Genet. 12: 321-323.
19. Nanda, N., T. Tanaka, and M. Schmid, 1996. The intron-containing ribosomal protein-encoding genes L5, L7a and L37a are unlinked in chicken. Gene 170:159-164.
20. Nakabayashi, O., O. Nomura, K. Nishimori, and S. Mizuno, 1995. The cDNA cloning and transient expression of a chicken gene encoding a 3β-hydroxysteroid dehydrogenase unique to major steroidogenic tissues. Gene 162:261-265.
21. O'Brien, S. J., J. E. Womack, L. A. Lyons, K. J. Moore, N. A. Jenkins, and N. G. Copeland, 1993. Anchored reference Loci for comparative mapping genome mapping in mammals. Nature Genet. 3:103-112.
22. Ottini, L., G. Marziali, A. Conti, A. Charlesworth, and V. Sorrentino, 1996. Alpha and β isoforms of ryanodine receptor from chicken skeletal muscle are the homologues of mammalian RYR1 and RYR3. Biochem. J. 315:207-216.
23. Rafidi, K., I. Simkina, E. Johnson, M. A. Moore, and L. C. Gerstenfeld, 1994. Characterization of the chicken osteopontin-encoding gene. Gene 140:163-169.
24. Riegert, P., R. A. Andersen, N. Bumstead, C. Döhring, M. Dominguez-Steglich, J. Engberg, J. Salomonsen, M. Schmid, J. Schwager, K. Skjodt, and J. Kaufman, 1996. The chicken β2-microglobulin gene is located on a non-major histocompatibility complex microchromosome: A small, G+C-rich gene with X and Y boxes in the promoter. Proc. Natl. Acad. Sci. USA 93:1242-1248.
25. Saitoh, Y., A. Ogawa, T. Hori, R. Kunita, and R. Kunita, 1993. Identification and localization of two genes on the chicken Z chromosome: implication of evolutionary conservation of the Z chromosome among avian species. Chromosome Res. 1:239-251.
26. Semple-Rowland, S. L., and D. A. Green, 1994. Molecular characterization of the alpha-subunit of cone photoreceptor cGMP phosphodiesterase in normal and rd chicken. Exp. Eye Res. 59:365-372.
27. Smith, E. J., H. H. Cheng, and R. L. Vallejo, 1996. Mapping functional chicken genes: an alternative approach. Poultry Sci. 75:642-647.
28. Shtivelman, E., B. Lifshitz, R. P. Gale, B. A. Roe, and E. Canaani, 1986. Alternative splicing of RNAs transcribed from the human abl gene and from the bcr-abl fused gene. Cell 47:277-284.
29. Tanaka, M., K. Maeda, and K. Nakashima, 1995. Chicken alpha-enolase but not β-enolase has a src-dependent tyrosine-phophorylation site: cDNA cloning and nucleotide sequence analysis. J. Biochem. 117:554-559.
30. Tanda, N., Y. Kawakami, T. Saito, S. Noji, and T. Nohno, 1995. Cloning and characterization of Wnt-4 and Wnt-11 cDNAs from chicken embryo. DNA Seq. 5:277-281.
31. Vetr, H., and W. Gebhard, 1990. Structure of the human alpha-1-microglobulin-bikunin gene. Hope-Seyler 371:1185-1196.
32. Wagstaff, P., H. Y. Kang, D. Mylott, P. J. Robbins, and M. White, 1995. Characterization of the avian GLUT1 glucose transporter: Differential regulation of GLUT1 and GLUT3 in chicken embryo fibroblasts. Mol. Biol. Cell 6:1575-1589.
33. Webb, T. E., M. G. Kaplan, and E. A. Barnard, 1996. Identification of 6h1 as a P2Y purinoreceptor: P2Y5. Biochim. Biophys. Res. Commun. 219:105-110.
34. Zehner, Z., Y. Li, B. A. Roe, B. M. Paterson, and C. M. Sax, 1987. The chicken vimentin gene. J. Biol. Chem. 262: 8112-8120.