Spectrum of Spontaneous Mutations in the Cyclic AMP Receptor Protein Gene on Chromosomal DNA of Escherichia coli

Journal of Radiation Research

Volumn 38, Issue 1, 1997, Pages 27-36

  Takimoto, Koichi ^a   Tachibana, Akira ^b   Ayaki, Hitoshi ^b   Yamamoto, Kazuo ^c  

^a YAMAGUCHI UNIVERSITY   (Japan)

^b KYOTO UNIVERSITY   (Japan)

^c TOHOKU UNIVERSITY   (Japan)

Author keywords

Chromosome; DNA sequence change; E. Coli crp gene; IS2 element; Spontaneous mutation

Indexed keywords

DNA; GENES; POLYMERASE CHAIN REACTION; PROTEINS;

DNA SEQUENCE CHANGE; E COLI CRP GENE; E. COLI; FRAMESHIFT; IS2 ELEMENT; PCR CLONING; PROTEIN GENES; RECEPTORS PROTEINS; SPECTRA'S; SPONTANEOUS MUTATION;

ESCHERICHIA COLI;

ESCHERICHIA COLI;

BACTERIAL DNA; CYCLIC AMP RECEPTOR;

AMINO ACID SEQUENCE; ARTICLE; BACTERIAL CHROMOSOME; BACTERIAL GENE; ESCHERICHIA COLI; GENETICS; MOLECULAR GENETICS; MUTATION; NUCLEOTIDE SEQUENCE;

AMINO ACID SEQUENCE; BASE SEQUENCE; CHROMOSOMES, BACTERIAL; DNA, BACTERIAL; ESCHERICHIA COLI; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; MUTATION; RECEPTORS, CYCLIC AMP;

EID: 0031090454     PISSN: 04493060     EISSN: None     Source Type: Journal    
DOI: 10.1269/jrr.38.27     Document Type: Article

References (33)

1. Drake, J.W. (1969) Comparative rates of spontaneous mutation. Nature 221: 1132.
2. Kuchino, Y., Mori, F., Kasai, H., Inoue, H., Iwai, S., Miura, K., Ohtsuka, E. and Nishimura, S. (1987) Misreading of DNA templates containing 8-hydroxydeoxy- guanosine at the modified base and at adjacent residues. Nature 327: 77-79.
3. Albertini, A.M., Hofer, M., Calos, M.P. and Miller, J.H. (1982) On the formation of spontaneous deletions: The importance of short sequence homologies in the generation of large deletions. Cell 29: 319-328.
4. Yatagai, F. and Glickman, B.W. (1990) Specificity of spontaneous mutation in the lacI gene cloned into bacteriophage M13. Mutat. Res. 243: 21-28.
5. Schaaper, R.M.and Dunn, R.L. (1991) Spontaneous mutation in the Escherichia coli lacI gene. Genetics 129: 317-326.
6. Tatagai, F., Horsfall, M.J. and Glickman, B.W. (1991) Specificity of SOS mutagenesis in native M13 lacI phage. J. Bacteriol. 173: 7996-7999.
7. Mo, J.-Y., Maki, M. and Sekiguchi, M. (1991) Mutational specificity of the dnaEI73 mutator associated with defect in the catalytic subunit of DNA polymerase III of Escherichia coli. J. Mol. Biol. 222: 925-936.
8. Akasaka, S., Takimoto, K. and Yamamoto, K. (1992) G:C → T:A and G:C → C:G transversions are the predominant spontaneous mutations in the Escherichia coli supF gene: an improved lacZ(am) E. coli host designed for assaying pZ189 supF mutational specificity. Mol. Gen. Genet. 235: 173-178.
9. Akasaka, S. and Yamamoto, K. (1995) Mutational specificity of the ferrous ion in a supF gene of Escherichia coli. Biochem. Biophys. Res. Commun. 213: 74-80.
10. Pastan, J. and Adhya, S. (1976) Cyclic adenosine-5′-monophosphate in Escherichia coli. Bacteriol. Rev. 40: 527-551.
11. Takimoto, K., Uchino, K., Ishizaki, K. and Ikenaga, M. (1991) Specificity of mutational DNA sequence changes induced by X-rays in the cloned Escherichia coli crp gene. Mutat. Res. 254: 199-206.
12. Takimoto, K., Yamamoto, K., Sagara, T. and Ishizaki, K. (1994) Spectrum of proton-induced mutagenesis of the Escherichia coli crp gene. Mutat. Res. 314: 1-9.
13. Aiba, H., Fujimoto, S. and Ozaki, N. (1982) Molecular cloning and nucleotide sequence of the gene for E. coli cAMP receptor protein. Nucl. Acids Res. 10: 1345-1361.
14. Aono, R., Yamasaki, M. and Tamura, G. (1979) High and selective resistance to mecillinam in adenylate cyclase-deficient or cyclic adenosine 3′,5′-monophosphate receptor protein-deficient mutants of Escherichia coli. J. Bacteriol. 137: 839-845.
15. Takimoto, K. (1986) Mutational DNA base sequence changes in plasmid damaged at a specific region by ultraviolet light. J. Radiat. Res. 27: 310-314.
16. Sanger, F.S., Nicklen, S. and Coulson, A.R. (1977) DNA sequencing with chain terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463-546.
17. Kitamura K., Torii, Y., Matsuoka, C. and Yamamoto, K. (1995) DNA sequence changes in mutations in the tonB gene on the chromosome of Escherichia coli K12: Insertion elements dominate the spontaneous spectra. Jpn. J. Genet. 70: 35-46.
18. Ono, T., Negishi, K. and Hayatsu, H. (1995) Spectra of superoxide-induced mutations in the lacI gene of a wild-type and a mutM strain of Esherichia coli K12. Mutat. Res. 326: 175-183.
19. Aruoma, O.I., Halliwell, B. and Dizdaroglu, M. (1989) Iron ion-dependent modification of bases in DNA by the superoxide radical-generating system hypoxanthine/xanthine oxidase. J. Biol. Chem. 264: 13024-13028.
20. Shibutani, S., Takeshita, M. and Grollman, A.P. (1991) Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG. Nature 349: 431-434.
21. Cheng, K.C., Cahill, D.S., Kasai, H., Nishimura, S. and Loeb L.A. (1992) 8-hydroxyguanine, and abundant form of oxidative DNA damage, causes G → T and A → C substitutions. J. Biol. Chem. 267: 166-172.
22. Schaaper, R.M. and Loeb, L.A. (1981) Depurination causes mutations in SOS-induced cells. Proc. Natl. Acad. Sci. USA 78: 1773-1777.
23. Kunkel, T.A. (1984) Mutational specificity of depurination. Proc. Natl. Acad. Sci. USA 81: 1494-1498.
24. Schaaper, R.M. (1988) Mechanisms of mutagenesis in the Escherichia coli mutator mutD5: Role of DNA mismatch repair. Proc. Natl. Acad. Sci. USA 85: 8216-8130.
25. Sambamurti, K., Callahan, J., Luo, X., Perkins, C.P., Jacobsen, J.S. (1988) Mechanisms of mutagenesis by a bulky DNA lesion at the guanine N7 position. Genetics 120: 863-873.
26. Kagawa, Y., Yatagai, F., Suzuki, M., Kase, Y., Kobayashi, A., Hirano, M., Kato, T., Watanabe, M. and Hanaoka, F. (1995) Analysis of mutations in the human HPRT gene induced by accelerated heavy-ion irradiation. J. Radiat. Res. 36: 185-195.
27. Streisinger, K., Okada, Y., Emrich, J., Newton, J., Tsugita, A., Terzaghi, E. and Inoue, M. (1966) Frameshift mutations and the genetic code. Cold Spring Harbor Symp. Quant. Biol. 31: 77-84.
28. Kunkel, T.A. and Soni, A. (1988) Mutagenesis by transient misalignment. J. Biol. Chem. 263: 14784-14789.
29. Singer, B.S. and Westlye, J. (1988) Deletion formation in bacteriophage T4. J. Mol. Biol. 202: 233-243.
30. Halliday, J.A. and Glickman, B.W. (1991) Mechanisms of spontaneous mutattion in DNA repair-proficient Escherichia coli. Mutat. Res. 250: 55-71.
31. Ghosal, D., Sommer, H. and Saedler, H. (1979) Nucleotide sequence of the transposable DNA-element IS2. Nucl. Acids Res. 6: 1111-1122.
32. Zerbib, U., Gamas, P. and Chandler, M. (1985) Specificity of insertion of IS1. J. Biol. Chem. 185: 517-524.
33. Kitamura, K. and Yamamoto, K. (1996) Mutagenic specificity of ultraviolet light in the tonB gene on the chromosome of Escherichia coli uvrA cells. Biochem. Biophys. Res. Commu. 220: 496-501.