Does polyploidy lead to fewer and shorter microsatellites in Barbus (Teleostei: Cyprinidae)?

Molecular Ecology

Volumn 6, Issue 2, 1997, Pages 169-178

  Chenuil, A ^a   Desmarais, E ^a   Pouyaud, L ^a   Berrebi, P ^a  

^a CNRS   (France)

Author keywords

Barbus; DNA amount regulation; microsatellite; repeat motif; slippage deletion bias; slipped strand mispairing

Indexed keywords

EID: 0031081722     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.1997.00170.x     Document Type: Article

References (33)

1. Allendorf FW, Thorgaard GH (1984) Tetraploidy and the evolution of salmonid fishes. In: Evolutionary Genetics of Fishes (ed. Turner B), pp. 1-53. Plenum Press, New York.
2. Astre JL, Ferraz C, Liautard JP, Sri Wiwada J (1988) MACRO BIO SOFT: Logiciel biologie moléculaire. CNRS - Prolabo.
3. Bachmann K, Goin OB, Goin CJ (1972) Nuclear DNA amounts in vertebrates. In: Evolution of Genetic Systems (ed. Smith HH), pp. 419-447. Gordon and Breach, New York.
4. Berrebi P (1995) Speciation of the genus Barbus in the north mediterranean basin: recent advances from biochemical genetics. Biological Conservation, 72, 237-249.
5. Berrebi P, Cattaneo-Berrebi G, Le Brun N (1993) Natural hybridization of two species of tetraploid barbels: Barbus meridionalis and B. barbus (Osteichtyes, Cyprinidae) in southern France. Biological Journal of the Linnean Society, 48, 319-333.
6. Brooker AL, Cook D, Bentzen P, Wright JM, Doyle RW (1994) Organization of microsatellites differs between mammals and cold water teleost fishes. Canadian Journal of Fisheries and Aquatic Sciences, 51, 1959-1966.
7. Crespin L, Berrebi P (1994) L'hybridation naturelle entre le barbeau commun et le barbeau méridional en France. Compte rendu de dix années de recherche. Bulletin Français de Pêche et de Pisciculture, 334, 177-189.
8. Edwards A, Hammond HA, Jin L, Caskey T, Chakraborty R (1992) Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups. Genomics, 12, 241-253.
9. Estoup A, Presa P, Krieg F, Vaiman D, Guyomard R (1993) (CT)n and (GT)n microsatellites: a new class of genetic markers for Salmo trutta L. (brown trout). Heredity, 71, 488-496.
10. Estoup A, Solignac M, Harry M, Cornuet JM (1993) Characterization of (GT)n and (CT)n microsatellites in two insect species: Apis mellifera and Bombus terrestris. Nucleic Acids Research, 21, 1427-1431.
11. García de León FJ, Dallas JF, Chatain B, et al. (1995) Development and use of microsatellite markers in sea bass, Dicentrarchus labrax (Linnaeus, 1758) (Perciformes: Serrandidae). Molecular Marine biology and Biotechnology, 4, 62-68.
12. Hamada H, Petrino MG, Kanunaga T (1982) A novel repeated element with Z-DNA forming potential is widely found in evolutionary diverse eukaryotic genomes. Proceedings of the National Academy of Sciences USA, 79, 6465-6469.
13. Hafez R (1981) Etude sur la cytogénétique et l'évolution génétique chez quelques cyprinidés de la région midi-pyrénées. PhD thesis. Institut National polytechnique, Toulouse.
14. Lagercrantz U, Ellegren H, Andersson L (1993) The abundance of various polymorphic microsatellite motifs differs between plants and vertebrates. Nucleic Acids Research, 21, 1111-1115.
15. Levinson G, Gutman GA (1987) Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Molecular Biology and Evolution, 4, 203-221.
16. Ohno S, Muramoto J, Klein J, Atkin NB (1969) Diploid-tetraploid relationship in Clupeoid and Salmonoid fish. In: Chromosomes Today (eds Darlington CD, Lewis KR), Oliver & Boyd Ltd, Edinburgh.
17. Poteaux C (1995) Interactions génétiques entre formes sauvages et formes domestiques chez la truite commune (Salmo trutta fario L.). PhD thesis, University of Montpellier II, Montpellier.
18. Raymond M, Rousset F (1995a) An exact test for population differentiation. Evolution, 49, 1280-1283.
19. Raymond M, Rousset F (1995b) GENEPOP (Version 1.2). Population Genetics software for exact tests and ecumenicism. Journal of Heredity, 86, 248-249.
20. Rubinsztein DC, Amos W, Leggo J et al. (1995) Microsatellite evolution - evidence for directionality and variation in rate between species. Nature Genetics, 10, 337-343.
21. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: a Laboratory Manual. Cold Spring Harbor, New York.
22. Schlötterer C, Tautz D (1992) Slippage synthesis of simple sequence DNA. Nucleic Acids Research, 20, 211-215.
23. Schmidtke J, Schulte B, Kuhl P, Engel W (1976) Gene action in fish of tetraploid origin. V. cellular RNA and protein content and enzyme activitites in cyprinid, clupeoid and salmonid species. Biochemical Genetics, 14, 975-980.
24. Singh L (1995) Biological significance of minisatellites. Electrophoresis, 16, 1586-1595.
25. Slettan A, Olsaker I, Lie O (1993) Isolation and characterization of variable (GT)n repetitive sequences from Atlantic salmon, Salmo salar L. Animal genetics, 24, 195-197.
26. Stallings RL, Ford AF, Nelson D et al. (1991) Evolution and distribution of (GT)n repetitive sequences in mammalian genomes. Genomics, 10, 807-815.
27. Stephan W (1989) Tandem-repetitive non-coding DNA: forms and forces. Molecular Biology and Evolution, 6, 198-212.
28. Stephan W, Cho S (1994) Possible role of natural selection in the formation of tandem-repetitive non-coding DNA. Genetics, 136, 333-341.
29. Strand M, Prolla TA, Liskay RM, Petes TD (1993) Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair. Nature, 365, 274-276.
30. Weber JL (1990) Informativeness of human (dC-dA)n. (dG-dT)n polymorphisms. Genomics, 7, 524-530.
31. Weber JL, Wong C (1993) Mutation of human short tandem repeats. Human Molecular Genetics, 2, 1123-1128.
32. Wells RD, Jacobs TM, Narang SA, Khorana HG (1967) Studies on poly nudeotides. LXIX. Synthetic deoxyribopolynucleotides as templates for the DNA polymerase of Escherichia coli. DNA-like polymers containing repeating trinucleotide sequences. Journal of Molecular Biology, 27, 237-263.
33. Wintero AK, Fredholm MM, Thomsen PD (1992) Variable (dG-dT)n. (dC-dA)n sequences in the porcine genome. Genomics, 12, 281-288.