Phylogenetic analysis of heterothallic Neurospora species

Fungal Genetics and Biology

Volumn 21, Issue 1, 1997, Pages 153-162

  Skupski, Marian P ^a,b   Jackson, David A ^a,c   Natvig, Donald O ^a  

^a UNIVERSITY OF NEW MEXICO   (United States)

^b NATIONAL CENTER FOR GENOME RESOURCES   (United States)

^c NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

Ancestral polymorphism; Neurospora; Phylogenetic analysis

Indexed keywords

FUNGAL DNA; MITOCHONDRIAL DNA;

ARTICLE; CONTROLLED STUDY; COSMID; FUNGAL GENETICS; GENE SEQUENCE; GENETIC POLYMORPHISM; MATING TYPE; NEUROSPORA; NEUROSPORA CRASSA; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM;

NEUROSPORA; NEUROSPORA CRASSA; NEUROSPORA DISCRETA; NEUROSPORA SITOPHILA; NEUROSPORA TETRASPERMA;

EID: 0031080347     PISSN: 10871845     EISSN: None     Source Type: Journal    
DOI: 10.1006/fgbi.1997.0966     Document Type: Article

References (23)

1. Ayala, F. J., Escalante, A., O'hUigin, C., and Klein, J. 1994. Molecular genetics of speciation and human origins. Proc. Natl. Acad. Sci. USA 91: 6787-6794.
2. Felsenstein, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27: 401-410.
3. Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package).
4. Frederick, L., Uecker, F. A., and Benjamin, C. R. 1969. Anew species of Neurospora from soil west of Pakistan. Mycologia 61: 1077-1084.
5. Jacobson, D. J. 1992. Control of mating type heterokaryon incompatibility by the tol gene in Neurospora crassa and N. tetrasperma. Genome 35: 347-353.
6. Kinsey, J. A., Garrett-Engele, P. W., Cambareri, E. B., and Selker, E. U. 1994. The Neurospora transposon Tad is sensitive to repeat-induced point mutation (RIP). Genetics 138: 657-664.
7. Kishino, H., and Hasegawa, M. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea. J. Mol. Evol. 29: 170-179.
8. Lewis, M. T., and Feldman, J. F. 1996. Evolution of the frequency (frq) clock locus in ascomycete fungi. Mol. Biol. Evol. 13: 1233-1241.
9. Merino, S. T., Nelson, M. A., Jacobson, D. J., and Natvig, D. O. 1996. Pseudohomothallism and evolution of the mating-type chromosome in Neurospora tetrasperma. Genetics 143: 789-799.
10. Merrow, M. W., and Dunlap, J. C. 1994. Intergeneric complementation of a circadian rhythmicity defect: Phylogenetic conservation of structure and function of the clock gene frequency. EMBO J. 13: 2257-2266.
11. Metzenberg, R. L., and Grotelueschen, J. S. 1992. Disruption of essential genes in Neurospora by RIP. Fungal. Genet. Newsl. 39: 37-49.
12. Natvig, D.O., Jackson, D. A., and Taylor, J. W. 1987. Random-fragment hybridization analysis of evolution in the genus Neurospora: The status of four-spored strains. Evolution 41: 1003-1021.
13. Penny, D., Hendy, M. D., and Henderson, I. M. 1987. Reliability of evolutionary trees. Cold Spring Harbor Symp. Quant. Biol. LII: 857-862.
14. Perkins, D. D., and Raju, N. B. 1986. Neurospora discreta, a new heterothallic species defined by its crossing behavior. Exp. Mycol. 10: 323-338.
15. Perkins, D. D., Turner, B. C., and Barry, E. G. 1976. Strains of Neurospora collected from nature. Evolution 30: 281-313.
16. Randall, T. A., and Metzenberg, R. L. 1995. Species-specific and mating type-specific DNA regions adjacent to mating type idiomorphs in the genus Neurospora. Genetics 141: 119-136.
17. Shear, C. L., and Dodge, B. O. 1927. Life histories and heterothallism of the red bread-mold fungi of the Monilia sitophila group. J. Agric. Res. 34: 1019-1042.
18. Swofford, D. L. 1993. PAUP: Phylogenetic Analysis Using Parsimony. Illinois Natural History Survey, Champaign, Illinois.
19. Swofford, D. L., Olsen, G. J., Waddell, P. J., and Hillis, D. M. 1996. Phylogenetic inference. In Molecular Systematics (D. M. Hillis, C. Moritz, and B. K. Mable, eds.), 2nd ed., pp. 407-514. Sinauer, Sunderland, MA
20. Tai, R. L. 1935. Two new species of Neurospora. Mycologia 27: 328-330.
21. Taylor, J. W., and Natvig, D. O. 1989. Mitochondrial DNA and evolution of heterothallic and pseudohomothallic Neurospora species. Mycol. Res. 91: 251-212.
22. Thompson, J. D., Higgins, D. G., and Gibson, T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
23. Vollmer, S. J., and Yanofsky, C. 1986. Efficient cloning of genes of Neurospora crassa. Proc. Natl. Acad. Sci. USA 83: 4869-4873.