Structural dynamics of water and the peptide backbone around the Schiff base associated with the light-activated process of octopus rhodopsin

Biochemistry

Volumn 36, Issue 4, 1997, Pages 864-870

  Nishimura, Shoko ^a   Kandori, Hideki ^a   Nakagawa, Masashi ^b   Tsuda, Motoyuki ^b   Maeda, Akio ^a  

^a KYOTO UNIVERSITY   (Japan)

^b UNIVERSITY OF HYOGO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BATHORHODOPSIN; RHODOPSIN;

AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CHROMATOPHORE; FOURIER ANALYSIS; HYDROGEN BOND; ISOMERISM; OCTOPUS; PHOTORECEPTOR CELL; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTON TRANSPORT; WATER ANALYSIS;

ANIMALS; CATTLE; HYDROGEN BONDING; MOLECULAR STRUCTURE; OCTOPODIFORMES; PEPTIDES; PHOTOCHEMISTRY; RHODOPSIN; SCHIFF BASES; SPECTROSCOPY, FOURIER TRANSFORM INFRARED; TEMPERATURE; WATER;

OCTOPUS;

EID: 0031054147     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi961795i     Document Type: Article

References (45)

1. Bagley, K., Eisenstein, L., Ebrey, T. G., & Tsuda, M. (1989) Biochemistry 28, 3366-3373.
2. Cooper, A., Dixon, S. F., & Tsuda, M. (1986) Eur. Biophys. J. 13, 195-201.
3. Deng, H., Manor, D., Weng, G., Rath, P., Koutalos, Y., Ebrey, T., Gebhard, R., Lugtenburg, J., Tsuda, M., & Callender, R. H. (1991) Photochem. Photobiol. 54, 1001-1007.
4. Deng, H., Huang, L., Callender, R., & Ebrey, T. (1994) Biophys. J. 66, 1129-1136.
5. Fahmy, K., Siebert, F., & Sakmar, T. P. (1994) Biochemistry 33, 13700-13705.
6. Fryxell, K. J., & Meyerowitz, E. M. (1987) EMBO J. 6, 443-451.
7. Gat, Y., & Sheves, M. (1993) J. Am. Chem. Soc. 115, 3772-3773.
8. Glew, D. N., & Rath, N. S. (1971) Can. J. Chem. 49, 837-856.
9. Han, M., & Smith, S. O. (1995) Biochemistry 34, 1425-1432.
10. Hashimoto, S., Takeuchi, H., Nakagawa, M., & Tsuda, M. (1996) FEBS Lett. 398, 239-242.
11. Humphrey, W., Xu, D., Sheves, M., & Schulten, K. (1995) J. Phys. Chem. 99, 14549-14560.
12. Kandori, H., & Maeda, A. (1995) Biochemistry 34, 14220-14229.
13. Kiselev, A., & Subramaniam, S. (1994) Science 266, 1369-1373.
14. Kitagawa, T., & Tsuda, M. (1980) Biochim. Biophys. Acta 624, 211-217.
15. Klinger, A., & Braiman, M. S. (1992) Biophys. J. 63, 1244-1255.
16. Koutalos, Y., Ebrey, T. G., Gilson, H. R., & Honig, B. (1990) Biophys. J. 55, 493-501.
17. Kusumi, A., Tsuda, M., Akino, T., Ohnishi, S., & Terayama, Y. (1983) Biochemistry 22, 1165-1170.
18. Maeda, A. (1996) Isr. J. Chem. 35, 387-400.
19. Maeda, A., Ohkita, Y. J., Sasaki, J., Shichida, Y., & Yoshizawa, T. (1993) Biochemistry 32, 12033-12038.
20. Masuda, S., Morita, E. H., Tasumi, M., Iwasa, T., & Tsuda, M. (1993a) J. Mol. Struct. 297, 29-34.
21. Masuda, S., Morita, E. H., Tasumi, M., Iwasa, T., & Tsuda, M. (1993b) FEBS Lett. 317, 223-227.
22. Metzler, D. E., & Harris, C. M. (1978) Vision Res. 18, 1417-1430.
23. Montell, C., Jones, K., Zuker, C., & Rubin, G. (1987) J. Neurosci. 7, 1558-1566.
24. Nathans, N. (1990) Biochemistry 29, 9746-9752.
25. Nishimura, S., Sasaki, J., Kandori, H., Lugtenburg, J., & Maeda, A. (1995) Biochemistry 34, 16758-16763.
26. Ohkita, Y. J., Sasaki, J., Maeda, A., Yoshizawa, T., Groesbeek, M., Verdegem, P., & Lugtenburg, J. (1995) Biophys. Chem. 56, 71-78.
27. Ovchinnikov, Y. A., Abdulaev, N. G., Zorotalaev, A. S., Artamonov, I. D., Bespalov, I. A., Dergachev, A. E., & Tsuda, M. (1988) FEBS Lett. 232, 69-72.
28. Palings, I., van den Berg, E. M. M., Lugtenburg, J., & Mathies, R. A. (1989) Biochemistry 28, 1498-1507.
29. Pande, C., Pande, A., Yue, W. T., & Callender, R. (1987) Biochemistry 26, 4941-4947.
30. Rafferty, C. N., & Shichi, H. (1981) Photochem. Photobiol. 33, 229-234.
31. Rodman-Gilson, H. S., Honig, B., Vroteau, A., Zarrilli, G., & Nakanishi, K. (1988) Biophys. J. 53, 261-269.
32. Rothschild, K. J., Marrero, H., Braiman, M., & Mathies, R. (1984) Photochem. Photobiol. 40, 675-679.
33. Sakmar, T. P., Franke, R. R., & Khorana, H. G. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 8309-8313.
34. Sampogna, R. V., & Honig, B. (1994) Biophys. J. 66, 1341-1352.
35. Steinberg, G., Ottolenghi, M., & Sheves, M. (1993) Biophys. J. 64, 1499-1502.
36. Suzuki, T., Narita, K., Yoshihara, K., Nagai, K., & Kito, Y. (1995) Vision Res. 35, 1011-1017.
37. Takei H., Gat, Y., Rothman, Z., Lewis, A., & Sheves, M. (1994) J. Biol. Chem. 269, 7387-7389.
38. Terakita, A., Tsukahara, Y., Hariyama, T., Seki, T., & Tashiro, H. (1993) Vision Res. 33, 2421-2426.
39. Tokunaga, F., Shichida, Y., & Yoshizawa, T. (1975) FEBS Lett. 55, 229-232.
40. Tsuda, M. (1979) Biochim. Biophys. Acta 545, 537-546.
41. Tsuda, M. (1987) Photochem. Photobiol. 45, 915-931.
42. Yamazaki, Y., Sasaki, J., Hatanaka, M., Kandori, H., Maeda, A., Needleman, R., Sinada, T., Yoshihara, K., Brown, L. S., & Lanyi, J. K. (1995) Biochemistry 34, 577-582.
43. Yamazaki, Y., Tuzi, S., Saitô, H., Kandori, H., Needleman, R., Lanyi, J. K., & Maeda, A. (1996) Biochemistry 35, 4063-4068.
44. Yoshizawa, T., & Wald, G. (1963) Nature 197, 1279-1286.
45. Zhukovsky, E. A., & Oprian, D. D. (1989) Science 246, 928-930.