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Volumn 44, Issue 2, 1997, Pages 214-225

Retroviral oligonucleotide distributions correlate with biased nucleotide compositions of retrovirus sequences, suggesting a duplicative stepwise molecular evolution

Author keywords

Computer assisted analysis; Core consensus; Cryptic simplicity; Nucleotide composition; Retrovirus nucleotide sequence; Slippage; Stepwise duplicative molecular evolution; Symmetry; Tandem repeat; TG CT excess

Indexed keywords

ARTICLE; COMPUTER ANALYSIS; CONSENSUS SEQUENCE; EVOLUTION; GENE DUPLICATION; NONHUMAN; NUCLEOTIDE SEQUENCE; RETROVIRUS; TANDEM REPEAT;

EID: 0031047665     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/PL00006138     Document Type: Article
Times cited : (3)

References (25)
  • 1
    • 0024296310 scopus 로고
    • An oligopurine sequence bias occurs in eukaryotic viruses
    • Beasty AM, Behe MJ (1988) An oligopurine sequence bias occurs in eukaryotic viruses. Nucleic Acids Res 16:1517-1528
    • (1988) Nucleic Acids Res , vol.16 , pp. 1517-1528
    • Beasty, A.M.1    Behe, M.J.2
  • 2
    • 0028229543 scopus 로고
    • The unusual nucleotide content of the HIV RNA genome results in a biased amino acid composition of HIV proteins
    • Berkhout B, VanHemert FJ (1994) The unusual nucleotide content of the HIV RNA genome results in a biased amino acid composition of HIV proteins. Nucleic Acids Res 22:1705-1711
    • (1994) Nucleic Acids Res , vol.22 , pp. 1705-1711
    • Berkhout, B.1    VanHemert, F.J.2
  • 3
    • 0028301837 scopus 로고
    • Nucleotide composition as a driving force in the evolution of retroviruses
    • Bronson EC, Anderson JN (1994) Nucleotide composition as a driving force in the evolution of retroviruses. J Mol Evol 38:506-532
    • (1994) J Mol Evol , vol.38 , pp. 506-532
    • Bronson, E.C.1    Anderson, J.N.2
  • 4
    • 0020488052 scopus 로고
    • Statistical significance of Symmetrical and repetitive segments in DNA
    • Day GR, Blake RD (1982) Statistical significance of Symmetrical and repetitive segments in DNA. Nucleic Acids Res 10:8323-8339
    • (1982) Nucleic Acids Res , vol.10 , pp. 8323-8339
    • Day, G.R.1    Blake, R.D.2
  • 5
    • 0020478245 scopus 로고
    • Molecular drive: A cohesive mode of species evolution
    • Dover G (1982) Molecular drive: a cohesive mode of species evolution. Nature 299:111-117
    • (1982) Nature , vol.299 , pp. 111-117
    • Dover, G.1
  • 7
    • 0342361063 scopus 로고
    • Sequence-directed mutagenesis: Evidence from a phylogenetic history of human α-interferon genes
    • Golding GB, Glickman BW (1985) Sequence-directed mutagenesis: evidence from a phylogenetic history of human α-interferon genes. Proc Natl Acad Sci USA 82:8577-8581
    • (1985) Proc Natl Acad Sci USA , vol.82 , pp. 8577-8581
    • Golding, G.B.1    Glickman, B.W.2
  • 8
    • 0028238894 scopus 로고
    • Overrepresentation of the disease associated (CAG) and (CGG) repeats in the human genome
    • Han J, Hsu C, Zhu Z, Longshore JW, Finley WH (1994) Overrepresentation of the disease associated (CAG) and (CGG) repeats in the human genome. Nucleic Acids Res 22:1735-1740
    • (1994) Nucleic Acids Res , vol.22 , pp. 1735-1740
    • Han, J.1    Hsu, C.2    Zhu, Z.3    Longshore, J.W.4    Finley, W.H.5
  • 9
    • 0029060923 scopus 로고
    • Dinucleotide relative abundance extremes: A genomic signature
    • Karlin S, Burge C (1995) Dinucleotide relative abundance extremes: a genomic signature. Trends Genet 11:283-290
    • (1995) Trends Genet , vol.11 , pp. 283-290
    • Karlin, S.1    Burge, C.2
  • 10
    • 0024311696 scopus 로고
    • Scrambled duplications in the feline leukemia virus gag gene: A putative pattern for molecular evolution
    • Laprevotte I (1989) Scrambled duplications in the feline leukemia virus gag gene: a putative pattern for molecular evolution. J Mol Evol 29:135-148
    • (1989) J Mol Evol , vol.29 , pp. 135-148
    • Laprevotte, I.1
  • 11
    • 0026478715 scopus 로고
    • Mo-MuLV nucleotide sequence exhibits three levels of oligomeric repetitions, suggesting a stepwise molecular evolution
    • Laprevotte I (1992) Mo-MuLV nucleotide sequence exhibits three levels of oligomeric repetitions, suggesting a stepwise molecular evolution. J Mol Evol 35:420-428
    • (1992) J Mol Evol , vol.35 , pp. 420-428
    • Laprevotte, I.1
  • 12
    • 0021248564 scopus 로고
    • Nucleotide sequence of the gag gene and gag-pol junction of feline leukemia virus
    • Laprevotte I, Hampe A, Sherr CJ, Galibert F (1984) Nucleotide sequence of the gag gene and gag-pol junction of feline leukemia virus. J Virol 50:884-894
    • (1984) J Virol , vol.50 , pp. 884-894
    • Laprevotte, I.1    Hampe, A.2    Sherr, C.J.3    Galibert, F.4
  • 13
    • 0029096775 scopus 로고
    • Reverse transcriptase and substrate dependence of the RNA hypermutagenesis reaction
    • Martinez MA, Sala M, Vartanian JP, Wain-Hobson S (1995) Reverse transcriptase and substrate dependence of the RNA hypermutagenesis reaction. Nucleic Acids Res 23:2573-2578
    • (1995) Nucleic Acids Res , vol.23 , pp. 2573-2578
    • Martinez, M.A.1    Sala, M.2    Vartanian, J.P.3    Wain-Hobson, S.4
  • 14
    • 0019952514 scopus 로고
    • Some indications for inverse DNA duplication
    • Nussinov R (1982) Some indications for inverse DNA duplication. J Theor Biol 95:783-791
    • (1982) J Theor Biol , vol.95 , pp. 783-791
    • Nussinov, R.1
  • 15
    • 0019830138 scopus 로고
    • (AGCTG) (AGCTG) (AGCTG) (GGGTG) as the primordial sequence of intergenic spacers: The role in immunoglobulin class switch
    • Ohno S (1981) (AGCTG) (AGCTG) (AGCTG) (GGGTG) as the primordial sequence of intergenic spacers: the role in immunoglobulin class switch. Differentiation 18:65-74
    • (1981) Differentiation , vol.18 , pp. 65-74
    • Ohno, S.1
  • 16
    • 0342927118 scopus 로고
    • Codon preference is but an illusion created by the construction principle of coding sequences
    • Ohn S (1988) Codon preference is but an illusion created by the construction principle of coding sequences. Proc Natl Acad Sci USA 85:4378-4382
    • (1988) Proc Natl Acad Sci USA , vol.85 , pp. 4378-4382
    • Ohn, S.1
  • 17
    • 0025021499 scopus 로고
    • Various regulatory sequences are deprived of their uniqueness by the universal rule of TA/CG deficiency and TG/CT excess
    • Ohno S, Yomo T (1990) Various regulatory sequences are deprived of their uniqueness by the universal rule of TA/CG deficiency and TG/CT excess. Proc Natl Acad Sci USA 87:1218-1222
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 1218-1222
    • Ohno, S.1    Yomo, T.2
  • 18
    • 0024561870 scopus 로고
    • Overlapping redundant sextuplets identical with regulatory elements of HIV-1 and SV40
    • Seto MH, Brunck TK, Bernstein RL (1989) Overlapping redundant sextuplets identical with regulatory elements of HIV-1 and SV40. Nucleic Acids Res 17:2783-2800
    • (1989) Nucleic Acids Res , vol.17 , pp. 2783-2800
    • Seto, M.H.1    Brunck, T.K.2    Bernstein, R.L.3
  • 19
    • 78249249862 scopus 로고
    • Repetitive DNA in mammals
    • Schaltauer Verlag, Stuttgart
    • Southern E (1972) Repetitive DNA in mammals. Symposia Medica Hoechst No 6. Schaltauer Verlag, Stuttgart, pp 19-27
    • (1972) Symposia Medica Hoechst No 6 , pp. 19-27
    • Southern, E.1
  • 20
    • 0022533981 scopus 로고
    • Crypic simplicity in DNA is a major source of genetic variation
    • Tautz D, Trick M, Dover GA (1986) Crypic simplicity in DNA is a major source of genetic variation. Nature 322:652-656
    • (1986) Nature , vol.322 , pp. 652-656
    • Tautz, D.1    Trick, M.2    Dover, G.A.3
  • 21
    • 0018974585 scopus 로고
    • Origin of retroviruses from cellular moveable genetic elements
    • Temin HM (1980) Origin of retroviruses from cellular moveable genetic elements. Cell 21:599-600
    • (1980) Cell , vol.21 , pp. 599-600
    • Temin, H.M.1
  • 22
    • 0029057423 scopus 로고
    • The tendency of lentiviral open reading frames to become A-rich: Constraints imposed by viral genome organization and cellular tRNA availability
    • Van Hemert FJ, Berkhout B (1995) The tendency of lentiviral open reading frames to become A-rich: constraints imposed by viral genome organization and cellular tRNA availability. J Mol Evol 41:132-140
    • (1995) J Mol Evol , vol.41 , pp. 132-140
    • Van Hemert, F.J.1    Berkhout, B.2
  • 23
    • 0025157834 scopus 로고
    • Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms
    • Weber JL (1990) Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. Genomics 7:524-530
    • (1990) Genomics , vol.7 , pp. 524-530
    • Weber, J.L.1
  • 25
    • 0025006614 scopus 로고
    • Origin and evolution of retroelements based upon their reverse transcriptase sequences
    • Xiong Y, Eickbush TH (1990) Origin and evolution of retroelements based upon their reverse transcriptase sequences. EMBO J 9:3353-3362
    • (1990) EMBO J , vol.9 , pp. 3353-3362
    • Xiong, Y.1    Eickbush, T.H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.