Identification of amino acid residues at nucleotide-binding sites of chaperonin GroEL/GroES and cpn10 by photoaffinity labeling with 2-azido-adenosine 5'-triphosphate

European Journal of Biochemistry

Volumn 244, Issue 2, 1997, Pages 627-634

  Bramhall, Elizabeth A ^a   Cross, Richard L ^a,d   Rospert, Sabine ^b   Steede, N Kalaya ^c   Landry, Samuel J ^c  

^a STATE UNIVERSITY OF NEW YORK   (United States)

^b UNIVERSITY OF BASEL   (Switzerland)

^c TULANE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d SUNY UPSTATE MEDICAL UNIVERSITY   (United States)

Author keywords

Chaperonin; GroEL; GroES; Nucleotide binding site; Photoaffinity labeling

Indexed keywords

CHAPERONIN;

AMINO ACID ANALYSIS; ARTICLE; BINDING SITE; CRYSTAL STRUCTURE; ESCHERICHIA COLI; PHOTOAFFINITY LABELING; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE;

ESCHERICHIA COLI;

EID: 0031039804     PISSN: 00142956     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1432-1033.1997.00627.x     Document Type: Article

References (56)

1. Abrahams, J. P., Leslie, A. G. W., Lutter, R. & Walker, J. E. (1994) Nature 370, 621-628.
2. Badcoe, I. G., Smith, C. J., Wood, S., Halsall, D. J., Holbrook, J. J., Lund, P. & Clark, A. R. (1991) Biochemistry 30, 9195-9200.
3. Blake, M. S., Johnston, K. H., Russel-Jones, G. J., Gotschilch, E. C. (1984) Anal. Biochem. 136, 175-179.
4. Bochkareva, E. S., Horovitz, A. & Girshovich, A. S. (1994) J. Biol. Chem. 269, 44-46.
5. Bochkareva, E. S., Lissin, N. M. & Girshovich, A. S. (1988) Nature 336, 254-257.
6. Boisvert, D. C., Wang, J., Otwinowski, Z., Horwich, A. L. & Sigler, P. B. (1996) Nature Struct. Biol. 3, 170-177.
7. Braig, K., Otwinowski, Z., Hedge, R., Boisvert, D., Joachimiak, A., Horwich, A. & Sigler, P. (1994) Nature 371, 578-586.
8. Brindle, K. M. (1988) Biochemistry 27, 6187-6196.
9. Buchner, J., Schmidt, M., Fuchs, M., Jaenicke, R., Rudolph, R., Schmid, F. X. & Kiefhaber, T. (1991) Biochemistry 30, 1586-1591.
10. Chandrasekhar, G. N., Tilly, K., Woolford, C., Hendrix, R. W. & Georgopoulos, C. (1986) J. Biol. Chem. 261, 12 414-12 419.
11. Chen, S., Roseman, A. M., Hunter, A. S., Wood, S. P., Burston, S. G., Ranson, N. A., Clarke, A. R. & Saibil, H. R. (1994) Nature 371, 261-264.
12. Cross, R. L., Cunningham, D., Miller, C. G., Xue, Z., Zhou, J.-M. & Boyer, P. D. (1987) Proc. Natl Acad. Sci. USA 84, 5715-5719.
13. Czarnecki, J. J. (1984) Biochim. Biophys. Acta 800, 41-51.
14. Fenton, W. A., Kashi, Y., Furtak, K. & Horwich, A. (1994) Nature 371, 614-619.
15. Georgopoulos, C. & Welch, W. J. (1993) Ann. Rev. Cell Biol. 9, 601-634.
16. Goloubinoff, P., Christeller, J. T., Gatenby, A. A. & Lorimer, G. H. (1989) Nature 342, 884-889.
17. Hartl, F.-U. & Martin, J. (1995) Curr. Opin. Struct. Biol. 5, 92-102.
18. Hartman, D. J., Hoogenraad, N. J., Condron, R. & Hoj, P. B. (1993a) Biochim. Biophys. Acta 1164, 219-222.
19. Hartman, D. J., Surin, B. P., Dixon, N. E., Hoogenraad, N. J. & Hoj, P. B. (1993b) Proc. Natl Acad. Sci. USA 90, 2276-2280.
20. Hunt, J. F., Weaver, A. J., Landry, S. J., Gierasch, L. & Deisenhofer, J. (1996) Nature 379, 37-45.
21. Koonin, E. V. & van der Vies, S. M. (1995) Trends Biochem. Sci. 20, 14-15.
22. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
23. LaDine, J. R. & Cross, R. L. (1991) J. Biol. Chem. 266, 7194-7198.
24. Laemmli, U. K. (1970) Nature 227, 680-685.
25. Landry, S. J., Zeilstra-Ryalls, J., Fayet, O., Georgopoulos, C. & Gierasch, L. M. (1993) Nature 364, 255-258.
26. Landry, S. J. & Gierasch, L. M. (1994) Annu. Rev. Biophys. Biomol. Struct. 23, 645-669.
27. Langer, T., Pfeifer, G., Martin, J., Baumeister, W. & Hartl, F.-U. (1992) EMBO J. 11, 4757-4765.
28. Lin, Z. L. & Eisenstein, E. (1996) Proc. Natl Acad. Sci. USA 93, 1977-1981.
29. Lissin, N. M., Venyaminov, S. Y. & Girshovich, A. S. (1990) Nature 348, 339-342.
30. Lissin, N. M. (1995) FEBS Lett. 361, 55-60.
31. Martin, J., Langer, T., Boteva, R., Schramel, A., Horwich, A. L. & Hartl, F-. U. (1991) Nature 352, 36-42.
32. Martin, J., Mayhew, M., Langer, T. & Hartl, F.-U. (1993a) Nature 366, 228-233.
33. Martin, J., Geromanos, S., Tempst, P. & Hartl, F.-U. (1993b) Nature 366, 279-282.
34. Mayhew, M., Silva, A. C. R., Martin, J., Erdjument-Bromage, H., Tempst, P. & Hartl, F.-U. (1996) Nature 379, 420-426.
35. Melese, T. & Boyer, P. D. (1985) J. Biol. Chem. 260, 15 398-15 401.
36. Morioka, M. & Ishikawa, H. (1993) J. Biochem. (Tokyo) 114, 468-472.
37. Murai, N., Taguchi, H. & Yoshida, M. (1995) J. Biol. Chem. 270, 19 957-19 963.
38. Penefsky, H. S. (1977) J. Biol. Chem. 252, 2891-2899
39. Peterson, G. L. (1977) Anal. Biochem. 83, 346-356.
40. Saibil, H. R., Dong, Z., Wood, S. & auf der Mauer, A. (1991) Nature 353, 25-26.
41. Saibil, H. R., Zheng, D., Roseman, A. M., Hunter, A. S., Watson, G. M. F., Chen, S., auf der Mauer, A., O'Hara, B. P., Wood, S. P., Mann, N. H., Barnett, L. K. & Ellis, R. J. (1993) Curr. Opin. Struct. Biol. 3, 265-273.
42. Schägger, H. & von Jagow, G. (1987) Anal. Biochem. 166, 368-379.
43. Schmidt, M., Buchner, J., Toddy, M. J., Lorimer, G. H. & Viitanen, P. V. (1994) J. Biol. Chem. 269, 10 304-10 311.
44. Sparrer, H., Lilie, H. & Buchner, J. (1996) J. Mol. Biol. 258, 74-87.
45. Tamura, J. K., LaDine, J. R. & Cross, R. L. (1988) J. Biol. Chem. 263, 7907-7912.
46. Todd, M. J., Viitanen, P. V. & Lorimer, G. H. (1994) Science 265, 659-666.
47. Todd, M. J., Boudkin, O., Freire, E. & Lorimer, G. H. (1995) FEBS Lett. 359, 123-125.
48. Todd, M. J., Lorimer, G. H. & Thirumalai, D. (1996) Proc. Natl Acad. Sci. USA 93, 4030-4035.
49. Towbin, H., Staehelin, T. & Gordon, J. (1979) Proc. Natl Acad. Sci. USA 76, 4350-4354.
50. Turner, B. M. (1983) J. Immunol. Methods 63, 1-6.
51. Viitanen, P. V., Donaldson, G. K., Lorimer, G. H., Lubben, T. H. & Gatenby, A. A. (1991) Biochemistry 30, 9716-9723.
52. Weissman, J. S., Kashi, Y., Fenton, W. A. & Horwich, A. L. (1994) Cell 78, 693-702
53. Weissman, J. S., Rye, H. S., Fenton, W. A., Beechem, J. M. & Horwich, A. L. (1996) Cell 84, 481-490.
54. Zahn, R., Spitzfaden, C., Ottiger, M., Wüthrich, K. & Plückthun, A. (1994) Nature 368, 261-265.
55. Zahn, R., Perrett, S., Stenberg, G. & Fersht, A. R. (1996) Science 271, 642-645.
56. Zheng, Xianxian, Rosenberg, L. E., Kalousek, F. & Fenton, W. A. (1993) J. Biol. Chem. 268, 7489-7493.